miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28325_ggo-mir-198:mirbase
Length = 62
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 59
>28511_hsa-mir-198:mirbase
Length = 62
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 59
>30114_ppa-mir-198:mirbase
Length = 62
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 cattggtccagaggggagataggttcctgtgatttttccttcttctctgtagaataaa 59
>30275_ptr-mir-198:mirbase
Length = 62
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 cattggtccagaggggagataggttcctgtgatttttccttcttctctgtagaataaa 59
>30891_ppy-mir-198:mirbase
Length = 62
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 cattggtccagaggggagataggttcctgtgatttttccttcttctctgtagaataaa 59
>27794_mml-mir-198:mirbase
Length = 62
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 cattggtccagaggggaaataggttcctgtgatttttccttcttctctgtagaataaa 59
>28230_mne-mir-198:mirbase
Length = 62
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 cattggtccagaggggaaataggttcctgtgatttttccttcttctctgtagaataaa 59
>27517_age-mir-198:mirbase
Length = 62
Score = 77.8 bits (39), Expect = 7e-16
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 4 tggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 5 tggtccagaggggagctaggtacctgtgatttttccttcttttctgtagaataaa 59
>27622_sla-mir-198:mirbase
Length = 62
Score = 67.9 bits (34), Expect = 7e-13
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 1 cattggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
|||||||||||||||||| | | | ||||||||||||||||||| ||| |||||||||
Sbjct: 2 cattggtccagaggggagctcgatacctgtgatttttccttcttttctgtagaataaa 59
>27581_lla-mir-198:mirbase
Length = 62
Score = 61.9 bits (31), Expect = 4e-11
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 4 tggtccagaggggagataggttcctgtgatttttccttcttctctatagaataaa 58
||||||||| ||||| ||||| | ||||||||||||||||| ||| |||||||||
Sbjct: 5 tggtccagaagggagctaggtacttgtgatttttccttcttttctgtagaataaa 59
