miRNEST 2.0, an integrative microRNA resource :: BLAST
>41078_gra-MIR398:mirbase
Length = 123
Score = 212 bits (107), Expect = 5e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 12 gccaagatggtttaccccagaggggtgccacctaagaacacaggtcatcccttaaccaaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaagatggtttaccccagaggggtgccacctaagaacacaggtcatcccttaaccaaa 60
Query: 72 tagcttgtgttctcaggtcacccctttggggtacatatatcttcgcc 118
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcttgtgttctcaggtcacccctttggggtacatatatcttcgcc 107
>41059_ghr-MIR398:mirbase
Length = 106
Score = 210 bits (106), Expect = 2e-55
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 12 gccaagatggtttaccccagaggggtgccacctaagaacacaggtcatcccttaaccaaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaagatggtttaccccagaggggtgccacctaagaacacaggtcatcccttaaccaaa 60
Query: 72 tagcttgtgttctcaggtcacccctttggggtacatatatcttcgc 117
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagcttgtgttctcaggtcacccctttggggtacatatatcttcgc 106
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttgggg 102
|||||||||||||||||||||||||||
Sbjct: 72 ttgtgttctcaggtcacccctttgggg 98
>41245_csi-MIR398:mirbase
Length = 225
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 cttgtgttctcaggtcacccctttggg 101
|||||||||||||||||||||||||||
Sbjct: 130 cttgtgttctcaggtcacccctttggg 156
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttgggg 102
|||||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttgggg 91
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttggg 101
||||||||||||||||||||||||||
Sbjct: 100 ttgtgttctcaggtcacccctttggg 125
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccctttgggg 102
||||||||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccctttgggg 105
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttggggtacatatatcttcgc 117
|||||||||||||||||||||| | ||||| | |||||||||
Sbjct: 124 ttgtgttctcaggtcaccccttcgcggtacttctatcttcgc 165
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 16 agatggtttaccccagaggggtgccacctaagaacacagg 55
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 6 agatggtttaccacgaaggggtgccacctaagaacccagg 45
>40381_rco-MIR398a:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccctttgggg 102
||||||||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccctttgggg 91
>42039_osa-MIR398a:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccctttggg 101
|||||||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccctttggg 109
>40403_ahy-MIR398:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 cttgtgttctcaggtcacccctttg 99
|||||||||||||||||||||||||
Sbjct: 127 cttgtgttctcaggtcacccctttg 151
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 72 ttgtgttctcaggtcacccctttg 95
>40479_gma-MIR398b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 95 ttgtgttctcaggtcacccctttg 118
>40478_gma-MIR398a:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 76 ttgtgttctcaggtcacccctttg 99
>40308_bol-MIR398a:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 70 ttgtgttctcaggtcacccctttg 93
>40089_ath-MIR398a:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 74 ttgtgttctcaggtcacccctttg 97
>39881_aly-MIR398a:mirbase
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 121 ttgtgttctcaggtcacccctttg 144
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 86 tgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 91 tgtgttctcaggtcacccct 110
