miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>29099_hsa-mir-1254:mirbase
          Length = 97

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                      
Query: 25 ggaggatggcttgagcctaggagttcgaggctgcagtgagctatgattgtgctgctgtac 84
          ||||||| |||||||||| | || | ||| ||||||||| |||| |||||||  ||||||
Sbjct: 5  ggaggattgcttgagcctggaagctggagcctgcagtgaactatcattgtgccactgtac 64

                       
Query: 85 tccagcctgggca 97
          |||||||| ||||
Sbjct: 65 tccagcctaggca 77




>29270_hsa-mir-3135b:mirbase
          Length = 68

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                        
Query: 38 agcctaggagttcgaggctgcagtgagcta 67
          |||| |||||||||||||||||||||||||
Sbjct: 68 agcccaggagttcgaggctgcagtgagcta 39




>29128_hsa-mir-1273f:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 25 ggaggatggcttgagcctaggagttcgaggctgcagtgagct 66
          ||||||| |||||||||| |||| | |||| |||||||||||
Sbjct: 6  ggaggattgcttgagcctgggagatggaggttgcagtgagct 47




>29127_hsa-mir-1273e:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                      
Query: 19 gaggcaggaggatggcttgagcctaggagttcgaggctgcagtgagctatgattgtgctg 78
          |||||||||| || |||||| || ||||  | |||||||||||||||   ||| | ||  
Sbjct: 2  gaggcaggagaattgcttgaacccaggaagtggaggctgcagtgagccgagatcgagcca 61

                           
Query: 79 ctgtactccagcctggg 95
          |||||||||||||||||
Sbjct: 62 ctgtactccagcctggg 78




>32329_mmu-mir-709:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 ggaggcagaggcaggaggat 31
          ||||||||||||||||||||
Sbjct: 69 ggaggcagaggcaggaggat 88




>32573_mmu-mir-3470a:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 7  actcaggaggcagaggcagg 26
          ||||||||||||||||||||
Sbjct: 69 actcaggaggcagaggcagg 50