miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00004;U2;ABGA01318435.1/1202-1017 9601:Pongo abelii (Sumatran
orangutan)
Length = 186
Score = 119 bits (60), Expect = 1e-26
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 89 tttttttttttgagatggattttcgctcttgttgcccaggctagagtgcaatggcatgat 148
Query: 62 ctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||
Sbjct: 149 ctcggctcaccacaacctccgcct 172
>RF00017;Metazoa_SRP;ABGA01295557.1/2812-2533 9601:Pongo abelii
(Sumatran orangutan)
Length = 280
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 280 tgagacggagtttcgctcttgttgcccaggctggagtgcaatggtgtgatctcagctcac 221
Query: 72 cacaacctccgcct 85
||||||||||||||
Sbjct: 220 cacaacctccgcct 207
>RF00017;Metazoa_SRP;ABGA01227117.1/6140-5862 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 107 bits (54), Expect = 4e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| |||||||||||||||||||||||||| ||||||| ||| | |||||||||
Sbjct: 152 tttttgagacggagtttcgctcttgttgcccaggctagagtgcaatggtgcgatctcggc 93
Query: 68 tcaccacaacctccgcct 85
||||| ||||||||||||
Sbjct: 92 tcaccgcaacctccgcct 75
>RF00004;U2;AC022872.4/17231-17047 9606:Homo sapiens (human)
Length = 185
Score = 103 bits (52), Expect = 6e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 88 tttttttttttgagatggattttcgctcttgttgcccaggctagagtgcaatggcatgat 147
Query: 62 ctcggctcaccacaacctccgcct 85
||| ||||||||||||||| ||||
Sbjct: 148 ctcagctcaccacaacctctgcct 171
>RF00004;U2;ABBA01038739.1/44151-43968 9606:Homo sapiens (human)
Length = 184
Score = 103 bits (52), Expect = 6e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 87 tttttttttttgagatggattttcgctcttgttgcccaggctagagtgcaatggcatgat 146
Query: 62 ctcggctcaccacaacctccgcct 85
||| ||||||||||||||| ||||
Sbjct: 147 ctcagctcaccacaacctctgcct 170
>RF00017;Metazoa_SRP;AC198432.3/174099-174377 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaac 77
|||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||
Sbjct: 275 ggagtttcactcttgttgcccaggctggagtgcagtggcgccatctcggctcaccgcaac 216
Query: 78 ctccgcct 85
||||||||
Sbjct: 215 ctccgcct 208
>RF00017;Metazoa_SRP;AC210181.5/143169-143450 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 95.6 bits (48), Expect = 1e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaac 77
|||||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||
Sbjct: 276 ggagtttcgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcaccgcaac 217
Query: 78 ctccgcct 85
||| ||||
Sbjct: 216 ctctgcct 209
>RF00017;Metazoa_SRP;ABGA01060882.1/5637-5908 9601:Pongo abelii
(Sumatran orangutan)
Length = 272
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 265 gagtttccctcttattgcccaggctggagtgcaatggagcgatctcggctcaccgcaacc 206
Query: 79 tccgcct 85
|||||||
Sbjct: 205 tccgcct 199
>RF00017;Metazoa_SRP;AADD01121916.1/6495-6773 9606:Homo sapiens
(human)
Length = 279
Score = 93.7 bits (47), Expect = 6e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 15 gatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccac 74
||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||||
Sbjct: 276 gatggagtttcgctcctgttgcccaggctggagtgcaatggcacgatctcagctcaccac 217
Query: 75 aacctccgcct 85
|||||||||||
Sbjct: 216 aacctccgcct 206
>RF00017;Metazoa_SRP;AADB02328392.1/351-633 9606:Homo sapiens
(human)
Length = 283
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 276 gagtttcactcttgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacc 217
Query: 79 tccgcct 85
|| ||||
Sbjct: 216 tctgcct 210
>RF00017;Metazoa_SRP;ABBA01057579.1/19536-19815 9606:Homo sapiens
(human)
Length = 280
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |||||
Sbjct: 273 gagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcggctcaccgcaacc 214
Query: 79 tccgcct 85
|| ||||
Sbjct: 213 tctgcct 207
>RF00017;Metazoa_SRP;AADB02010026.1/405350-405627 9606:Homo sapiens
(human)
Length = 278
Score = 93.7 bits (47), Expect = 6e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||| ||||||||||||||| ||||||||||||||| |||||| ||| |||||
Sbjct: 158 ttttttttttttagatggagtttcgcttttgttgcccaggctgcagtgcaatggtgtgat 99
Query: 62 ctcggctcaccacaacctc 80
|||||||||| |||||||
Sbjct: 98 ctcggctcactgcaacctc 80
>RF00004;U2;AACZ02156246.1/20079-20237 9598:Pan troglodytes
(chimpanzee)
Length = 159
Score = 93.7 bits (47), Expect = 6e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||
Sbjct: 85 tttttttttttgagatggattttcgctcttgttgcccaggctagagtgcaatggcatgat 144
Query: 62 ctcggctcaccacaa 76
||| |||||||||||
Sbjct: 145 ctcagctcaccacaa 159
>RF00017;Metazoa_SRP;ABGA01085104.1/2727-3049 9601:Pongo abelii
(Sumatran orangutan)
Length = 323
Score = 91.7 bits (46), Expect = 2e-18
Identities = 75/82 (91%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 4 tttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatct 63
||||||||||||||||||| | ||||| |||||| ||||||||||||||||||| |||||
Sbjct: 154 tttatttttgagatggagtcttgctct-gttgcc-aggctggagtgcagtggagcgatct 97
Query: 64 cggctcaccacaacctccgcct 85
|||||||| ||||||||||||
Sbjct: 96 cggctcactgcaacctccgcct 75
>RF00017;Metazoa_SRP;ABGA01012901.1/9667-9949 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||||||||||||||||||||||||| ||| |||||| | |||||
Sbjct: 283 tgagatggagtttcgctcttgttgcccaggctggagtgcaatggtatgatcttgactcac 224
Query: 72 cacaacctccgcct 85
||||||||||||
Sbjct: 223 tgcaacctccgcct 210
>RF00017;Metazoa_SRP;ABBA01012660.1/2509-2208 9606:Homo sapiens
(human)
Length = 302
Score = 91.7 bits (46), Expect = 2e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
|||||||||| ||||| |||||||||||||||||||||||||| ||| | |||||| ||
Sbjct: 286 tttttgagatagagttgtgctcttgttgcccaggctggagtgcaatggcgcgatctcagc 227
Query: 68 tcaccacaacctccgcct 85
||||| ||||||||||||
Sbjct: 226 tcaccgcaacctccgcct 209
>RF00017;Metazoa_SRP;ABSL01064553.1/16809-16511 9606:Homo sapiens
(human)
Length = 299
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||| ||||||||||||||||||||| ||| | ||||| |||| ||
Sbjct: 299 tgagatggagtttcgctcctgttgcccaggctggagtgcaatggcgcgatcttggctaac 240
Query: 72 cacaacctccgcct 85
| ||||||||||||
Sbjct: 239 ctcaacctccgcct 226
>RF00017;Metazoa_SRP;CABD01229683.2/2771-3053 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 283 tgagatggcgttttgctcttgttgcccaggctggagtgcaatggtgtgatctcggctcac 224
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 223 tgcaacctctgcct 210
>RF00017;Metazoa_SRP;AANU01286028.1/26918-26635 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||
Sbjct: 284 tgagatggagtttcgctcttgttgcccaggctggattgcaatggtgtgatttcggctcac 225
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 224 tgcaacctctgcct 211
>RF00017;Metazoa_SRP;ABGA01060883.1/329-613 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 89.7 bits (45), Expect = 9e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 21 gtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctc 80
||||| ||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||
Sbjct: 276 gtttccctcttattgcccaggctggagtgcaatggagcgatctcggctcaccgcaacctc 217
Query: 81 cgcct 85
|||||
Sbjct: 216 cgcct 212
>RF00017;Metazoa_SRP;ABGA01273660.1/24353-24634 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacca 73
|||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct: 282 agatggagcttcgctcttgttgctcaggctggagtgcagtggcgtgatcttggctcactg 223
Query: 74 caacctccgcct 85
||||||| ||||
Sbjct: 222 caacctctgcct 211
>RF00017;Metazoa_SRP;AC068675.17/76187-76471 9606:Homo sapiens
(human)
Length = 285
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||||||||||||||||||||||||| |||| ||| ||||||| ||||||| |||||
Sbjct: 278 gagtttcgctcttgttgcccaggctggattgcaatggtgtgatcttggctcactgcaacc 219
Query: 79 tccgcctg 86
||||||||
Sbjct: 218 tccgcctg 211
>RF00017;Metazoa_SRP;CABD01334069.1/3775-3430 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 346
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 26 gctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||
Sbjct: 134 gctcttgttgcccaggctggagtgcaatggtatgatctcggctcaccgcaacctccgcct 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||| ||||
Sbjct: 327 tgttgcccaggctggagtgcrgtgg 303
>RF00017;Metazoa_SRP;AANU01100981.1/5311-5012 9544:Macaca mulatta
(rhesus monkey)
Length = 300
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||| ||||||||||||| ||| |||||||||||| |||||||||
Sbjct: 293 gagtttcactcttgttgcctaggctggagtgcaatggtgtgatctcggcttaccacaacc 234
Query: 79 tccg 82
||||
Sbjct: 233 tccg 230
>RF00017;Metazoa_SRP;ABGA01104451.1/3243-3524 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||||||||||||||||||||||||||||| ||| | |||||| |||||| |||||
Sbjct: 275 gagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacc 216
Query: 79 tccgcct 85
|||||||
Sbjct: 215 tccgcct 209
>RF00017;Metazoa_SRP;AACZ02167696.1/15941-16203 9598:Pan troglodytes
(chimpanzee)
Length = 263
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| |||||||||||||||| ||||||||||||||||| ||| | ||||||||
Sbjct: 152 tttttgagacggagtttcgctcttgtcgcccaggctggagtgcaatggcgccatctcggc 93
Query: 68 tcaccacaacctccg 82
|||| |||||||||
Sbjct: 92 tcactgcaacctccg 78
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||||
Sbjct: 244 tgttgcccaggctggagtgcagtgg 220
>RF00017;Metazoa_SRP;AC187610.3/160817-160538 9598:Pan troglodytes
(chimpanzee)
Length = 280
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||||||||||||||||||||||||||||| ||| | ||||| |||||||| |||||
Sbjct: 273 gagtttcgctcttgttgcccaggctggagtgcaatggtgcgatcttggctcaccgcaacc 214
Query: 79 tccgcct 85
|| ||||
Sbjct: 213 tctgcct 207
>RF00017;Metazoa_SRP;AADA01241454.1/33373-33099 9598:Pan troglodytes
(chimpanzee)
Length = 275
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| || |||||| ||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 158 ttttttttcttgagacagagtttcactctttttgcccaggctggagtgcagtggtgtgat 99
Query: 62 ctcggctcaccacaacctc 80
|||||||||| |||||||
Sbjct: 98 ctcggctcactgcaacctc 80
>RF00017;Metazoa_SRP;AADC01149088.1/2161-1880 9606:Homo sapiens
(human)
Length = 282
Score = 85.7 bits (43), Expect = 1e-16
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 282 ttgagacggagtctcgctct-gttgcccaggctggagtgcaatggagcgatctcggctca 224
Query: 71 ccacaacctccgcct 85
| ||||||||||||
Sbjct: 223 cagcaacctccgcct 209
>RF00017;Metazoa_SRP;ABSL01053300.1/20384-20103 9606:Homo sapiens
(human)
Length = 282
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||| ||||||||||||||||||| |||||| ||| | |||||| ||||||
Sbjct: 281 tgagatggagttttgctcttgttgcccaggctgaagtgcaatggcgcgatctcagctcac 222
Query: 72 cacaacctccgcctg 86
|||||||| |||||
Sbjct: 221 tacaacctctgcctg 207
>RF00017;Metazoa_SRP;AADC01141441.1/107153-106870 9606:Homo sapiens
(human)
Length = 284
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| ||||||||||||||||||||||| || ||| ||||||||||||||| |||||
Sbjct: 277 gagttttgctcttgttgcccaggctggagtacaatggcgtgatctcggctcactgcaacc 218
Query: 79 tccgcct 85
|||||||
Sbjct: 217 tccgcct 211
>RF00017;Metazoa_SRP;AANU01097975.1/8785-8502 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 277 gagttttgctcttgttgcccaggctggagtgcaatggcgtgatctcggctcactgcaacc 218
Query: 79 tccgcct 85
|| ||||
Sbjct: 217 tctgcct 211
>RF00017;Metazoa_SRP;ABGA01352550.1/26374-26093 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||| |||
Sbjct: 282 tgagatggagtttcactcttgttgcccaggctggagtgcaatggtgcgatctcggcccac 223
Query: 72 cacaacctccgcct 85
| |||||| ||||
Sbjct: 222 cggaacctctgcct 209
>RF00017;Metazoa_SRP;ABGA01280672.1/9010-8728 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 281 agatgaagtttcgctcttgttgcccaggctggagtgcagtggtgcaatctcggctcac 224
>RF00017;Metazoa_SRP;ABGA01300832.1/5264-5545 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| ||||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 282 tgagatggagtttcactcttgttgcccaggctggagtgcaatggcgcaatctcagctcac 223
Query: 72 cacaacctccgcct 85
| ||||||| ||||
Sbjct: 222 cgcaacctctgcct 209
>RF00017;Metazoa_SRP;AACZ02200841.1/1373-1090 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||| |||||||||||||| |||||||||||||| ||| ||||||| |||||||
Sbjct: 284 tgagatggagcttcgctcttgttgctcaggctggagtgcaatggcgtgatcttggctcac 225
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 224 tgcaacctctgcct 211
>RF00017;Metazoa_SRP;ABSL01046864.1/6571-6851 9606:Homo sapiens
(human)
Length = 281
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 16 atggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccaca 75
||||||||||| || ||||||||||||||||||||| ||| ||||||||||||||| ||
Sbjct: 279 atggagtttcgatcctgttgcccaggctggagtgcaatggcgtgatctcggctcactgca 220
Query: 76 acctccgcct 85
||||| ||||
Sbjct: 219 acctctgcct 210
>RF00017;Metazoa_SRP;AP002993.3/77150-76870 9606:Homo sapiens
(human)
Length = 281
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 16 atggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccaca 75
||||||||||| || ||||||||||||||||||||| ||| ||||||||||||||| ||
Sbjct: 279 atggagtttcgatcctgttgcccaggctggagtgcaatggcgtgatctcggctcactgca 220
Query: 76 acctccgcct 85
||||| ||||
Sbjct: 219 acctctgcct 210
>RF00017;Metazoa_SRP;ABBA01038457.1/15871-16151 9606:Homo sapiens
(human)
Length = 281
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||
Sbjct: 281 tgagatggagtttcactcttgttgcccaggctggagtgcaatggcgcaatctcggttcac 222
Query: 72 cacaacctccgcct 85
||||||||||||
Sbjct: 221 tgcaacctccgcct 208
>RF00017;Metazoa_SRP;AADD01024744.1/29111-29392 9606:Homo sapiens
(human)
Length = 282
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 282 tgagatggaaattcgctcttgttgcccaggctgaagtgcgatggcgtgatctcggctcac 223
Query: 72 cacaacctccgcct 85
| ||||||| ||||
Sbjct: 222 cgcaacctctgcct 209
>RF00017;Metazoa_SRP;AANU01199476.1/5830-6131 9544:Macaca mulatta
(rhesus monkey)
Length = 302
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 292 tttttttttttgagatggagtttccctcttgttgcccaggctggagtgca 243
>RF00004;U2;AANU01267089.1/2725-2878 9544:Macaca mulatta (rhesus
monkey)
Length = 154
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| |||||||| ||||||| |||||||||||||||| ||| |||||||||||
Sbjct: 81 tttttgagagggagtttccctcttgtcacccaggctggagtgcaatggcgtgatctcggc 140
Query: 68 tcaccacaacctcc 81
|||| ||||||||
Sbjct: 141 tcactgcaacctcc 154
>RF00017;Metazoa_SRP;AANU01215466.1/30670-30951 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 13 gagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacc 72
||||||||| ||| ||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 281 gagatggagattcactcttgttgcccaggctggagtgcaatgatgtgatcttggctcacc 222
Query: 73 acaacctccgcct 85
||||||| ||||
Sbjct: 221 gcaacctctgcct 209
>RF00017;Metazoa_SRP;ABGA01015610.1/12838-13119 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 79.8 bits (40), Expect = 9e-15
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgagatggagtttcgctcttgttgcccaggctggagtgca 243
>RF00017;Metazoa_SRP;ABGA01182987.1/957-1220 9601:Pongo abelii
(Sumatran orangutan)
Length = 264
Score = 79.8 bits (40), Expect = 9e-15
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 152 tttttgagacggagtttcgctcttgttgcccaggctggagtgca 109
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||||
Sbjct: 244 tgttgcccaggctggagtgcagtgg 220
>RF00017;Metazoa_SRP;AADA01270340.1/4157-4439 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 79.8 bits (40), Expect = 9e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacca 73
|||||||||||| ||||| ||||||||||||||| ||| || |||||||||||||||
Sbjct: 281 agatggagtttcactcttattgcccaggctggagcgcaacggcgtgatctcggctcactg 222
Query: 74 caacctccgcct 85
||||||||||||
Sbjct: 221 caacctccgcct 210
>RF00017;Metazoa_SRP;AADC01110475.1/66623-66983 9606:Homo sapiens
(human)
Length = 361
Score = 79.8 bits (40), Expect = 9e-15
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||| ||||| ||||||| || ||||||||||||||||||||| | |||
Sbjct: 154 tttttttttttgagacggagtctcgctct-gtcgcccaggctggagtgcagtggcgggat 96
Query: 62 ctcggctcaccacaacctccgcct 85
|||||||||| ||| ||||||||
Sbjct: 95 ctcggctcactgcaagctccgcct 72
>RF00017;Metazoa_SRP;CABD01476972.1/527-247 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 281
Score = 79.8 bits (40), Expect = 9e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||| ||||||||||||||||| |||| ||| ||||||| || ||||
Sbjct: 281 tgagatggagtttcgcttttgttgcccaggctggaatgcaatggcgtgatcttgggtcac 222
Query: 72 cacaacct 79
| ||||||
Sbjct: 221 cgcaacct 214
>RF00017;Metazoa_SRP;AANU01276448.1/2367-2648 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 79.8 bits (40), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||| || ||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 282 tgagatggagtatcactcttgttgcccaggctggagtgcaatggcgcgatctcggctcac 223
>RF00017;Metazoa_SRP;ABGA01231108.1/3579-3296 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| |||||||||||||||||||||||||| ||| ||||||| ||||||| |||||
Sbjct: 277 gagttttgctcttgttgcccaggctggagtgcaatggcgtgatcttggctcacagcaacc 218
Query: 79 tccgcct 85
|| ||||
Sbjct: 217 tctgcct 211
>RF00017;Metazoa_SRP;ABGA01251873.1/10297-10016 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||||||||||||||||||||||||||||| | | | |||||| |||||
Sbjct: 282 tgagacggagtttcgctcttgttgcccaggctggagtgcaatcgcgccatctcgactcac 223
Query: 72 cacaacctccgcctg 86
|||||||||||||
Sbjct: 222 tgcaacctccgcctg 208
>RF00017;Metazoa_SRP;AACZ02197897.1/2533-2815 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 276 gagtttcactcttgttgcccaggctggagtgcaatggcatgatctcggctcacagaaacc 217
Query: 79 tccgcct 85
|||||||
Sbjct: 216 tccgcct 210
>RF00017;Metazoa_SRP;AACZ02153889.1/8080-7794 9598:Pan troglodytes
(chimpanzee)
Length = 287
Score = 77.8 bits (39), Expect = 3e-14
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 3 ttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatc 62
|||||||||||||| ||||| ||||||| || ||||||||||||||||||||| | ||||
Sbjct: 156 ttttatttttgagacggagtctcgctct-gtcgcccaggctggagtgcagtggcgcgatc 98
Query: 63 tcggctcaccacaacctccgcct 85
|||| |||| ||| ||||||||
Sbjct: 97 tcggttcactgcaagctccgcct 75
>RF00017;Metazoa_SRP;AADA01184445.1/19005-18723 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||||||||||||||||||||| | ||||| |||||| |||||
Sbjct: 276 gagtttcactcttgttgcccaggctggagtgcagtggtgcaatctcagctcactgcaacc 217
Query: 79 tccgcct 85
|||||||
Sbjct: 216 tccgcct 210
>RF00017;Metazoa_SRP;AADA01016412.1/5183-5480 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 77.8 bits (39), Expect = 3e-14
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 4 tttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatct 63
||||||||||||| ||||| | ||||| |||||| ||||||||||||||||||| |||||
Sbjct: 154 tttatttttgagacggagtcttgctct-gttgcc-aggctggagtgcagtggagcgatct 97
Query: 64 cggctcaccacaacctccgcctg 86
||||||| |||||||||||||
Sbjct: 96 tggctcactgcaacctccgcctg 74
>RF00017;Metazoa_SRP;AACZ02116269.1/1052-775 9598:Pan troglodytes
(chimpanzee)
Length = 278
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 125 gcccaggctggagtgcagtggagtgatctcggctcactgcaacctctgcct 75
>RF00017;Metazoa_SRP;AL357500.17/74632-74351 9606:Homo sapiens
(human)
Length = 282
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct: 263 tgttgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccgcct 209
>RF00017;Metazoa_SRP;AADB02036916.1/602388-602106 9606:Homo sapiens
(human)
Length = 283
Score = 77.8 bits (39), Expect = 3e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||
Sbjct: 283 ttgagatggagtcttgctct-gttgcccaggctggagtgcagtggcgcgatctcggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
>RF00017;Metazoa_SRP;AADB02020239.1/376033-376314 9606:Homo sapiens
(human)
Length = 282
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||| |||||
Sbjct: 275 gagttttgctcttcttgcccaggctggagtgcaatggcgtgatcttggctcactgcaacc 216
Query: 79 tccgcct 85
|||||||
Sbjct: 215 tccgcct 209
>RF00017;Metazoa_SRP;ABBA01039737.1/49277-49003 9606:Homo sapiens
(human)
Length = 275
Score = 77.8 bits (39), Expect = 3e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| || |||||| ||||||| ||| | ||||||||||||||||||||||| |||||
Sbjct: 158 ttttttttcttgagacagagtttcactccttttgcccaggctggagtgcagtggtgtgat 99
Query: 62 ctcggctcaccacaacctc 80
|||||||||| |||||||
Sbjct: 98 ctcggctcactgcaacctc 80
>RF00017;Metazoa_SRP;ABSL01071339.1/163607-163890 9606:Homo sapiens
(human)
Length = 284
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||| |||||||||||||| |||||||| | ||||||||||||| |||||
Sbjct: 277 gagtttcactcttattgcccaggctggaatgcagtggcgcgatctcggctcactgcaacc 218
Query: 79 tccgcct 85
|||||||
Sbjct: 217 tccgcct 211
>RF00017;Metazoa_SRP;AADB02010026.1/407128-406819 9606:Homo sapiens
(human)
Length = 310
Score = 77.8 bits (39), Expect = 3e-14
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 4 tttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatct 63
||||||||||||| ||||| | ||||| |||||| |||||||||||||| |||| |||||
Sbjct: 154 tttatttttgagacggagtcttgctct-gttgcc-aggctggagtgcagcggagagatct 97
Query: 64 cggctcaccacaacctccgcctg 86
|||||||| |||||||||||||
Sbjct: 96 cggctcactgcaacctccgcctg 74
>RF00017;Metazoa_SRP;AC023043.8/9773-9490 9606:Homo sapiens (human)
Length = 284
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 284 tgagacggagtttcactcttgttgctcaggctggagtgcagtggcacgatctcggctcac 225
Query: 72 cacaacctccgcctg 86
||||||| |||||
Sbjct: 224 tgcaacctctgcctg 210
>RF00017;Metazoa_SRP;AANU01300249.1/24583-24300 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||| ||||||||||| |||||| ||||||| ||| |||||||| ||||||
Sbjct: 284 tgagatggagttttgctcttgttgctcaggctagagtgcaatggcgtgatctcagctcac 225
Query: 72 cacaacctccgcctg 86
||||||| |||||
Sbjct: 224 tgcaacctctgcctg 210
>RF00017;Metazoa_SRP;AANU01201507.1/1505-1788 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||||| | |||||||||||||||||||||| ||||
Sbjct: 265 tgttgcccaggctggagtgcagtgatgcgatctcggctcaccacaacctctgcct 211
>RF01059;mir-598;ABSL01067202.1/5153-5285 9606:Homo sapiens
(human)
Length = 133
Score = 77.8 bits (39), Expect = 3e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 9 ttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggct 68
|||||||||||||| | ||||| |||||||||||||||||||||||| | ||||||||||
Sbjct: 13 ttttgagatggagtcttgctct-gttgcccaggctggagtgcagtggcgcgatctcggct 71
Query: 69 cac 71
|||
Sbjct: 72 cac 74
Score = 54.0 bits (27), Expect = 5e-07
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 9 ttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||||||||| | ||||| ||||||||||||||||||||
Sbjct: 127 ttttgagatggagtcttgctct-gttgcccaggctggagtgca 86
>RF00017;Metazoa_SRP;ABGA01211172.1/18273-17973 9601:Pongo abelii
(Sumatran orangutan)
Length = 301
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
||||||||||||||||| |||||| ||||||| ||| ||||||||||||||| ||||||
Sbjct: 274 agtttcgctcttgttgctcaggctagagtgcaatggcatgatctcggctcaccgcaacct 215
Query: 80 ccgcct 85
| ||||
Sbjct: 214 ctgcct 209
>RF00017;Metazoa_SRP;ABGA01197357.1/14717-14438 9601:Pongo abelii
(Sumatran orangutan)
Length = 280
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||| ||||||||||| |||||||||||||||||| ||||| | |||||||
Sbjct: 280 tgagacggagttctgctcttgttgcacaggctggagtgcagtggtgtgatgtgggctcac 221
Query: 72 cacaacctccgcct 85
| ||||||| ||||
Sbjct: 220 cgcaacctctgcct 207
>RF00017;Metazoa_SRP;ABGA01291646.1/18820-19110 9601:Pongo abelii
(Sumatran orangutan)
Length = 291
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
|||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||
Sbjct: 283 agtttcgctcttgttgcccaggctggagtgcagtggtacgatcttggctcactgcaacct 224
Query: 80 ccgcct 85
| ||||
Sbjct: 223 ctgcct 218
>RF00017;Metazoa_SRP;AACZ02059968.1/17527-17812 9598:Pan troglodytes
(chimpanzee)
Length = 286
Score = 75.8 bits (38), Expect = 1e-13
Identities = 63/71 (88%), Gaps = 4/71 (5%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctgga----gtgcagtggagtgatctcggctcaccac 74
||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| |
Sbjct: 279 gagtttcactcttgttgcccaggctggatggagtgcagtggtgtgatctcggctcaccgc 220
Query: 75 aacctccgcct 85
|||||| ||||
Sbjct: 219 aacctctgcct 209
>RF00017;Metazoa_SRP;AADA01244850.1/579-296 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 26 gctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 269 gctcttgttgcccaggctggagtgcaatggtgtgatctcggctcac 224
>RF00017;Metazoa_SRP;AACZ02006283.1/44997-45278 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
|||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 274 agtttcgctcttgttgcccaggctggagtgcaatggcacgatctcggctcactgcaacct 215
Query: 80 ccgcct 85
| ||||
Sbjct: 214 ctgcct 209
>RF00017;Metazoa_SRP;AC007229.1/34014-33711 9606:Homo sapiens
(human)
Length = 304
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| ||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||
Sbjct: 304 tgagacggagttttgctcttattgcccaggctggagtgcaatggtgcgatctcggctcac 245
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 244 tgcaacctctgcct 231
>RF00017;Metazoa_SRP;AADD01042441.1/10723-11005 9606:Homo sapiens
(human)
Length = 283
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||| ||||||||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 283 tgagatggagcttcgctcttgttgcccaggctggagtgcaatggtgcaatctcagctcac 224
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 223 tgcaacctctgcct 210
>RF00017;Metazoa_SRP;AADC01128110.1/20452-20169 9606:Homo sapiens
(human)
Length = 284
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||
Sbjct: 284 tgagacggagtttcgctcttgttgccaaggctggagtacagtggcacaatctcggctcac 225
Query: 72 cacaacctccgcct 85
||||||||||||
Sbjct: 224 tgcaacctccgcct 211
>RF00017;Metazoa_SRP;AADB02017999.1/3462-3200 9606:Homo sapiens
(human)
Length = 263
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| ||||||| |||||||||||||||||||||||| | ||| | ||||||||
Sbjct: 152 tttttgagacggagttttgctcttgttgcccaggctggagtgaaatggcgccatctcggc 93
Query: 68 tcaccacaacctcc 81
|||| ||||||||
Sbjct: 92 tcactgcaacctcc 79
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||||
Sbjct: 244 tgttgcccaggctggagtgcagtgg 220
>RF00017;Metazoa_SRP;AADB02020052.1/102288-101985 9606:Homo sapiens
(human)
Length = 304
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| ||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||
Sbjct: 304 tgagacggagttttgctcttattgcccaggctggagtgcaatggtgcgatctcggctcac 245
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 244 tgcaacctctgcct 231
>RF00017;Metazoa_SRP;CABD01180400.1/5673-5392 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||||||||||||||||| ||||||| ||| | | ||| ||||||
Sbjct: 282 tgagatggagtttcgctcttgttgcccaggctagagtgcaatggcgcaacctctgctcac 223
Query: 72 cacaacctccgcct 85
| ||||||| ||||
Sbjct: 222 cgcaacctctgcct 209
>RF00017;Metazoa_SRP;CABD01048418.1/5276-4998 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 279
Score = 75.8 bits (38), Expect = 1e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| ||||||||||||||||||||||||| ||||||| ||| | ||||||||
Sbjct: 152 tttttgagacagagtttcgctcttgttgcccaggctagagtgcaatggtgcaatctcggc 93
Query: 68 tcaccacaacctccgcct 85
|||| ||||||| ||||
Sbjct: 92 tcactgcaacctctgcct 75
>RF00017;Metazoa_SRP;AANU01208877.1/1615-1335 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| |||||||||||||||||||||| |||||| || || | ||||||
Sbjct: 281 tgagatggagtttcactcttgttgcccaggctggagtacagtggcatggtcacagctcac 222
Query: 72 cacaacctccgcct 85
||||||||||||
Sbjct: 221 tgcaacctccgcct 208
>RF00017;Metazoa_SRP;AANU01289442.1/905-623 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 283 tgagatggagtctcgctcttgtcacccaggctggagtgcagtggcaagatctcggctcac 224
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 223 tgcaacctctgcct 210
>RF00017;Metazoa_SRP;AANU01272978.1/4107-3825 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| ||
Sbjct: 152 ttttttagatggagtttcgctcttgttacccaggctggagtgcaatggtacgatctcagc 93
Query: 68 tcaccacaacctcc 81
|||| ||||||||
Sbjct: 92 tcactgcaacctcc 79
>RF00017;Metazoa_SRP;AANU01236483.1/36712-36431 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||||
Sbjct: 282 tgagatgaggtttcactcttgttgctaaggctggagtgcaatggcgtgatctcggctcac 223
Query: 72 cacaacctccgcct 85
||||||||||||
Sbjct: 222 ggcaacctccgcct 209
>RF00017;Metazoa_SRP;AANU01292852.1/19895-20182 9544:Macaca mulatta
(rhesus monkey)
Length = 288
Score = 75.8 bits (38), Expect = 1e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgca 51
||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agatggagtttcgctcttgttgcccaggctggagtgca 251
>RF00017;Metazoa_SRP;ABGA01267726.1/8695-8413 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 73.8 bits (37), Expect = 5e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| ||||||| ||||||||||||||||||||| || | ||||||||||||
Sbjct: 283 ttgagatggagtctcgctct-gttgcccaggctggagtgcagaggcgcgatctcggctca 225
Query: 71 c 71
|
Sbjct: 224 c 224
>RF00017;Metazoa_SRP;ABGA01397540.1/2954-3235 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 275 gagtttcgctcttgttgcccaggctggagtgcaatggcgccatctcggctcac 223
>RF00017;Metazoa_SRP;ABGA01338212.1/1509-1791 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| |||||||||||||||||||||||||||| ||||||| |||||| |||||
Sbjct: 276 gagtttcactcttgttgcccaggctggagtgcagtgacatgatctcagctcactgcaacc 217
Query: 79 tccgc 83
|||||
Sbjct: 216 tccgc 212
>RF00017;Metazoa_SRP;AACZ02128713.1/4914-4617 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||
Sbjct: 291 gagtttccctctttttgcccaggctggagtgcaatggcgtgatctcggctcac 239
>RF00017;Metazoa_SRP;AACZ02154509.1/5623-5904 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 17 tggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaa 76
||||||||| ||||||||||||||||||||||||| ||| | |||||||||||| |||
Sbjct: 277 tggagtttcactcttgttgcccaggctggagtgcaatggcgcaatctcggctcactgcaa 218
Query: 77 cctcc 81
|||||
Sbjct: 217 cctcc 213
>RF00017;Metazoa_SRP;ABBA01016899.1/154829-155109 9606:Homo sapiens
(human)
Length = 281
Score = 73.8 bits (37), Expect = 5e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaac 77
||||| |||||||| ||||||||||||||||||||||| | |||||| |||||| ||||
Sbjct: 274 ggagtctcgctctt-ttgcccaggctggagtgcagtggcgcgatctcagctcacggcaac 216
Query: 78 ctccgcctg 86
|||||||||
Sbjct: 215 ctccgcctg 207
>RF00017;Metazoa_SRP;AANU01250058.1/23781-24069 9544:Macaca mulatta
(rhesus monkey)
Length = 289
Score = 73.8 bits (37), Expect = 5e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaac 77
|||||||| ||||||||||| |||||||||||| ||| |||||||||||||||| ||||
Sbjct: 283 ggagtttcactcttgttgcctgggctggagtgcaatggcgtgatctcggctcaccgcaac 224
Query: 78 c 78
|
Sbjct: 223 c 223
>RF00017;Metazoa_SRP;AANU01200547.1/793-1124 9544:Macaca mulatta
(rhesus monkey)
Length = 332
Score = 73.8 bits (37), Expect = 5e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 9 ttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggct 68
||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||| |||
Sbjct: 148 ttttgagatggagtttcgctcttgttgcccagggtggcgtgcaatggcacaatctcagct 89
Query: 69 caccacaacctccgcct 85
|||| ||||||| ||||
Sbjct: 88 caccgcaacctctgcct 72
>RF00017;Metazoa_SRP;ABGA01074417.1/3010-2728 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| ||||||| |||||||||||||||||||||||||| ||| |||||| |||||||
Sbjct: 283 tgagacggagttttgctcttgttgcccaggctggagtgcaatggcatgatcttggctcac 224
>RF00017;Metazoa_SRP;ABGA01063191.1/3004-2650 9601:Pongo abelii
(Sumatran orangutan)
Length = 355
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 152 tttttgagttggagtttcgctcttgtcgcccaggctggagttcagtgg 105
>RF00017;Metazoa_SRP;ABGA01099339.1/28259-27977 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 283 tgagatggagtctcgctcttattgcccaggctggagtgcagtgg 240
>RF00017;Metazoa_SRP;ABGA01335089.1/365-723 9601:Pongo abelii
(Sumatran orangutan)
Length = 359
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||| |||| | |||||||||| |||||||| |||||| ||| |||||
Sbjct: 158 tttttttttttgagacagagtctagctcttgttgtccaggctgcagtgcaatggcgtgat 99
Query: 62 ctcggctcaccacaacctccgcct 85
||||||||||| | ||||| ||||
Sbjct: 98 ctcggctcaccgcgacctctgcct 75
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||||
Sbjct: 342 tgttgcccaggctggagtgcagtgg 318
>RF00017;Metazoa_SRP;AADA01120377.1/5047-5352 9598:Pan troglodytes
(chimpanzee)
Length = 306
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 306 tgagatggagtttcgctgttgttgcccaggctggagtgca 267
>RF00017;Metazoa_SRP;AACZ02154193.1/15706-15985 9598:Pan troglodytes
(chimpanzee)
Length = 280
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 280 tgagatggagtttcactcttgttgcccaggctggagtgca 241
>RF00017;Metazoa_SRP;AADA01108662.1/8975-8682 9598:Pan troglodytes
(chimpanzee)
Length = 294
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 294 tgagatggagtttcactcttgttgcccaggctggagtgca 255
>RF00017;Metazoa_SRP;AACZ02080413.1/42671-42952 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 282 tgagatggagtttcactcttgttgcccaggctggaatgcagtgg 239
>RF00017;Metazoa_SRP;AADA01198236.1/687-398 9598:Pan troglodytes
(chimpanzee)
Length = 290
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 290 tgagacggagtttcgctcttgttgcccaggctggagtgca 251
>RF00017;Metazoa_SRP;AACZ02070716.1/27787-27507 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 281 tgagatggagtttcactcttgttgcccaggctggagtgca 242
>RF00017;Metazoa_SRP;AC003684.1/209339-209700 9606:Homo sapiens
(human)
Length = 362
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 143 tttttgagttggagtttcgctcttgtcgcccaggctggagttcagtgg 96
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||||
Sbjct: 343 tgttgcccaggctggagtgcagtgg 319
>RF00017;Metazoa_SRP;ABBA01075396.1/21166-21447 9606:Homo sapiens
(human)
Length = 282
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||| ||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 282 tgagagggagtttcactcttgttgcccaggctggagtgcaatggcgccatctcggctcac 223
>RF00017;Metazoa_SRP;AADD01198325.1/4187-4480 9606:Homo sapiens
(human)
Length = 294
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 294 tgagatggagtttcactcttgttgcccaggctggagtgca 255
>RF00017;Metazoa_SRP;AADC01144185.1/1515-1226 9606:Homo sapiens
(human)
Length = 290
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 67 tttttgagttggagtttcgctcttgtcgcccaggctggagttcagtgg 20
Score = 50.1 bits (25), Expect = 8e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||||
Sbjct: 271 tgttgcccaggctggagtgcagtgg 247
>RF00017;Metazoa_SRP;AADC01087178.1/2360-2079 9606:Homo sapiens
(human)
Length = 282
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacca 73
||||||||| |||| ||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 279 agatggagtctcgccctt-ttgcccaggctggagtgcagtggtgcgatctcggctcactg 221
Query: 74 caacctccgcct 85
||| ||||||||
Sbjct: 220 caagctccgcct 209
>RF00017;Metazoa_SRP;AADD01142743.1/2651-2932 9606:Homo sapiens
(human)
Length = 282
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaac 77
|||||||| ||||||||||||||||||||||||| ||| | |||||||||||| ||||
Sbjct: 276 ggagtttcactcttgttgcccaggctggagtgcaatggcgcaatctcggctcactgcaac 217
Query: 78 ctcc 81
||||
Sbjct: 216 ctcc 213
>RF00017;Metazoa_SRP;AANU01192641.1/45177-45458 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 26 gctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| ||||
Sbjct: 268 gctcttgttgcccaggctggagtgcaatggcgctatctcggctcaccgcaacctctgcct 209
>RF00004;U2;ABGA01008733.1/748-608 9601:Pongo abelii (Sumatran
orangutan)
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| |||||||| ||||||| ||||||||||||||||| ||| | ||||||||
Sbjct: 73 tttttgagacggagtttccctcttgtcgcccaggctggagtgcaatggcgcaatctcggc 132
Query: 68 tcac 71
||||
Sbjct: 133 tcac 136
>RF00004;U2;AADC01003020.1/13191-13331 9606:Homo sapiens (human)
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 73 tttttgagatggagtttccctcttgtcgcccaggctggagtgca 116
>RF00017;Metazoa_SRP;ABGA01093781.1/18416-18133 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||||||||||||| |||||| |||||||| |||||| ||||
Sbjct: 277 gagtttcactcttgttgcccaggctggagcacagtggcgtgatctcagctcactgtaacc 218
Query: 79 tccgcct 85
|||||||
Sbjct: 217 tccgcct 211
>RF00017;Metazoa_SRP;ABGA01231613.1/858-1155 9601:Pongo abelii
(Sumatran orangutan)
Length = 298
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 125 gcccaggctggagtgcagtcgcgtgatctcggctcactgcaacctccgcct 75
>RF00017;Metazoa_SRP;ABGA01262429.1/35408-35125 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||
Sbjct: 265 tgttgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctctgcct 211
>RF00017;Metazoa_SRP;ABGA01303498.1/2745-2447 9601:Pongo abelii
(Sumatran orangutan)
Length = 299
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 261 tgttgcccaggctggagtgcagtgttgcgatctcggctcactgcaacctccgcct 207
>RF00017;Metazoa_SRP;ABGA01006118.1/24807-24526 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctc 69
|||||||||| ||||||||||||||||||| |||||| ||||||||||||
Sbjct: 275 gagtttcgcttttgttgcccaggctggagtacagtggcatgatctcggctc 225
>RF00017;Metazoa_SRP;ABGA01158646.1/1415-1133 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct: 276 gagtttcactcttgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacc 217
Query: 79 tccgcct 85
|| ||||
Sbjct: 216 tctgcct 210
>RF00017;Metazoa_SRP;AACZ02010415.1/9793-10075 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 260 gcccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcct 210
>RF00017;Metazoa_SRP;AACZ02150364.1/46624-46905 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| || ||| ||||||||||||||||||||||| | ||||||||||||| |||||
Sbjct: 275 gagttttgcccttattgcccaggctggagtgcagtggtgcgatctcggctcactgcaacc 216
Query: 79 tccgcct 85
|| ||||
Sbjct: 215 tctgcct 209
>RF00017;Metazoa_SRP;AACZ02003140.1/751-470 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||
Sbjct: 263 tgttgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctctgcct 209
>RF00017;Metazoa_SRP;AACZ02216483.1/5974-6256 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| | ||||| ||||||||||||||| |||||||| | ||||||||||||
Sbjct: 283 ttgagatggagtcttgctct-gttgcccaggctggaatgcagtggcgcgatctcggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
>RF00017;Metazoa_SRP;AADA01196114.1/23385-23104 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| |||||||||||||||||||||||||| ||| | |||||||||||| |||||
Sbjct: 275 gagttttgctcttgttgcccaggctggagtgcaatggcgccatctcggctcactgcaacc 216
Query: 79 tccgcct 85
|| ||||
Sbjct: 215 tctgcct 209
>RF00017;Metazoa_SRP;AADA01002908.1/3722-3440 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 260 gcccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgcct 210
>RF00017;Metazoa_SRP;ABSL01060815.1/32590-32309 9606:Homo sapiens
(human)
Length = 282
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 259 gcccaggctggagtgcagtggcgtgatctcggctcacagcaacctcc 213
>RF00017;Metazoa_SRP;ABBA01048440.1/9037-9319 9606:Homo sapiens
(human)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||| || ||||||||||||||| ||| ||||||||
Sbjct: 264 tgttgcccaggctggagtgcagaggcgtgatctcggctcactgcaagctccgcct 210
>RF00017;Metazoa_SRP;AADD01109841.1/1684-1407 9606:Homo sapiens
(human)
Length = 278
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||||||||||| |||||| ||||||| ||||
Sbjct: 125 gcccaggctggagtgcagtggagtgatctcagctcactgcaacctctgcct 75
>RF00017;Metazoa_SRP;AADB02035138.1/25911-26193 9606:Homo sapiens
(human)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 27 ctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||||||||||||||||| | |||||| |||||| ||||||||
Sbjct: 268 ctcttgttgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctcc 214
>RF00017;Metazoa_SRP;AADC01071795.1/582-864 9606:Homo sapiens
(human)
Length = 283
Score = 69.9 bits (35), Expect = 8e-12
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| || |||| |||||||||||||||||||||||||| |||| ||||||
Sbjct: 283 ttgagatggagtctcactct-gttgcccaggctggagtgcagtggagcaatcttggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
>RF00017;Metazoa_SRP;AADD01111802.1/3172-3455 9606:Homo sapiens
(human)
Length = 284
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| ||||||||||| |||||||||||||||||| | |||||||||||| |||||
Sbjct: 277 gagttttgctcttgttgctcaggctggagtgcagtggcgctatctcggctcactgcaacc 218
Query: 79 tccgcct 85
|| ||||
Sbjct: 217 tctgcct 211
>RF00017;Metazoa_SRP;CABD01368992.2/4255-4538 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 284
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||||| |||||||||||||||||||| |||||| |||||||| ||| || |||||
Sbjct: 277 gagtttcgcccttgttgcccaggctggagtacagtggtgtgatctcagcttactgcaacc 218
Query: 79 tccgcct 85
|| ||||
Sbjct: 217 tctgcct 211
>RF00017;Metazoa_SRP;AANU01289128.1/38957-38676 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||
Sbjct: 265 tgttgcccaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcct 211
>RF00017;Metazoa_SRP;ABGA01012283.1/3373-3042 9601:Pongo abelii
(Sumatran orangutan)
Length = 332
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||| ||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 155 tttttttttctgagacggagttttgctcttgttgcccaggctggagtgca 106
>RF00017;Metazoa_SRP;ABGA01045104.1/52289-52570 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| |||||||| || ||||||||||||||||||||| |||| ||||| ||||||
Sbjct: 282 tgagacggagtttcacttttgttgcccaggctggagtgcggtggcacgatcttagctcac 223
Query: 72 cacaacctccgcct 85
||||||||| ||||
Sbjct: 222 cacaacctctgcct 209
>RF00017;Metazoa_SRP;ABGA01149634.1/4407-4126 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 24 tcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgc 83
|||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||| ||
Sbjct: 269 tcgctcttgtcccccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgc 210
Query: 84 ct 85
||
Sbjct: 209 ct 208
>RF00017;Metazoa_SRP;ABGA01107186.1/3562-3279 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| ||||| ||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 284 tgagatggagtttcactcttattgcccaggctggagtgcaatggtgcaatctcagctcac 225
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 224 tgcaacctctgcct 211
>RF00017;Metazoa_SRP;AACZ02080787.1/7638-7919 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 157 tttttttttttgagacggagtctcgctct-gttgcccaggctggagtgcagtgg 105
>RF00017;Metazoa_SRP;AADA01182454.1/15096-15380 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 36 cccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||| |||||| |||||||||||| ||| ||||||||||||
Sbjct: 261 cccaggctggagttcagtggcgtgatctcggcttaccgcaacctccgcct 212
>RF00017;Metazoa_SRP;AACZ02155418.1/32750-32469 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgca 51
||||||||||||||||||||||||||||||||||
Sbjct: 276 ggagtttcgctcttgttgcccaggctggagtgca 243
>RF00017;Metazoa_SRP;AADC01020428.1/255356-255076 9606:Homo sapiens
(human)
Length = 281
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 281 tgagatggagtttcgcttttgttgcccagactggagtgcggtggcacgatcttagctcac 222
Query: 72 cacaacctccgcct 85
| ||||||| ||||
Sbjct: 221 cgcaacctctgcct 208
>RF00017;Metazoa_SRP;AADB02323510.1/341-623 9606:Homo sapiens
(human)
Length = 283
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||| | |||||||| ||||||||||||||||||||| | |||| |||||||
Sbjct: 283 tgagatggagtcttgctcttgtcgcccaggctggagtgcagtggcgcaatcttggctcac 224
Query: 72 cacaacctccgcct 85
| || |||| ||||
Sbjct: 223 cgcagcctctgcct 210
>RF00017;Metazoa_SRP;ABSL01062425.1/58132-58433 9606:Homo sapiens
(human)
Length = 302
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
|||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||||
Sbjct: 275 agtttcactcttgttgcccaggctggagtgcaatggcacgatctcggctcacagaaacct 216
Query: 80 ccgcct 85
||||||
Sbjct: 215 ccgcct 210
>RF00017;Metazoa_SRP;AL158801.4/94738-94406 9606:Homo sapiens
(human)
Length = 333
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 155 tttttttttctgagacagagtttcgctcttgttgcccaggctggagtgca 106
>RF00017;Metazoa_SRP;AL590282.6/19296-18996 9606:Homo sapiens
(human)
Length = 301
Score = 67.9 bits (34), Expect = 3e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||| |||||| ||||||| ||| |||||||||||||||| ||| |||||||||||
Sbjct: 284 tttttgaattggagtctcgctct-gttccccaggctggagtgcaatggcgtgatctcggc 226
Query: 68 tcaccacaacctccgcct 85
|||| ||||||| ||||
Sbjct: 225 tcactgcaacctctgcct 208
>RF00017;Metazoa_SRP;ABBA01023443.1/8460-8729 9606:Homo sapiens
(human)
Length = 270
Score = 67.9 bits (34), Expect = 3e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
||||| ||||||||||||||| ||||||| || |||||||||||||||||||||
Sbjct: 157 tttttttttttgagatggagtctcgctct-gtcgcccaggctggagtgcagtgg 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 33 ttgcccaggctggagtgcagtgg 55
|||||||||||||||||||||||
Sbjct: 249 ttgcccaggctggagtgcagtgg 227
>RF00017;Metazoa_SRP;CABD01161913.1/1048-767 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||| ||||| ||||||||||||||||||||||||| ||| ||||||| |||||
Sbjct: 282 tgagatggcgtttcactcttgttgcccaggctggagtgcaatggctcgatctcgactcac 223
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 222 tgcaacctctgcct 209
>RF00017;Metazoa_SRP;CABD01048448.1/7459-7741 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 26 gctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||| |||| ||| |||||||||||||||
Sbjct: 269 gctcttgttgcccaggctggaatgcaatggtgtgatctcggctcac 224
>RF00017;Metazoa_SRP;CABD01530395.2/590-309 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| ||||||| |||||||||||||||||||||||||| ||| | |||| |||||||
Sbjct: 282 tgagacggagttttgctcttgttgcccaggctggagtgcaatggtgcaatcttggctcac 223
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 222 tgcaacctctgcct 209
>RF00017;Metazoa_SRP;AANU01265091.1/38431-38147 9544:Macaca mulatta
(rhesus monkey)
Length = 285
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
|||||||||||||| |||||||||||||||| ||| |||||| ||||||| |||||||
Sbjct: 140 agtttcgctcttgtcacccaggctggagtgcaatggcatgatcttggctcactacaacct 81
Query: 80 cc 81
||
Sbjct: 80 cc 79
>RF00017;Metazoa_SRP;AANU01245857.1/17054-16772 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||| ||| ||||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 283 tgagatggagcttcactcttgttgcccaggctggagtgcaatggcgcaatctcagctcac 224
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 223 tgcaacctctgcct 210
>RF00017;Metazoa_SRP;AANU01197377.1/9650-9932 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||| ||||||| |||||||||||||||||||||||||| ||| | |||||| | |||
Sbjct: 283 tgagacggagttttgctcttgttgcccaggctggagtgcaatggcgcaatctcgacccac 224
Query: 72 cacaacctccgcct 85
||||||||||||
Sbjct: 223 tgcaacctccgcct 210
>RF00017;Metazoa_SRP;ABGA01294512.1/5800-5493 9601:Pongo abelii
(Sumatran orangutan)
Length = 308
Score = 65.9 bits (33), Expect = 1e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 ttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctc 64
|||||||||||| ||||| || |||| |||||||||||||||||||||||| ||||
Sbjct: 150 ttatttttgagacggagtctcactct-gttgcccaggctggagtgcagtggcactatctt 92
Query: 65 ggctcaccacaacctccgcct 85
||||||| ||||||||||||
Sbjct: 91 ggctcactgcaacctccgcct 71
>RF00017;Metazoa_SRP;AADA01298945.1/4281-4568 9598:Pan troglodytes
(chimpanzee)
Length = 288
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||||||| || |||||||||||||||
Sbjct: 269 tgttgcccaggctggagtgcagaggtgtgatctcggctcac 229
>RF00017;Metazoa_SRP;AC109912.10/23323-23605 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||| |||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 276 gagttttgctcttgttgcccaggctggagtgcaatggcgccatctcggctcac 224
>RF00017;Metazoa_SRP;AC021231.8/103254-103536 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||| ||||||||||||||||||||||||| ||| | |||||| ||||||
Sbjct: 276 gagtttcactcttgttgcccaggctggagtgcaatggcgcgatctcagctcac 224
>RF00017;Metazoa_SRP;ABSL01066046.1/14086-14365 9606:Homo sapiens
(human)
Length = 280
Score = 65.9 bits (33), Expect = 1e-10
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||||| ||||||| | |||||||| ||||||||||| | |||
Sbjct: 156 tttttttttttgagatggagtctcgctctg--tccccaggctagagtgcagtggcgcgat 99
Query: 62 ctcggctcaccacaacctcc 81
|||||||||| ||||||||
Sbjct: 98 ctcggctcactgcaacctcc 79
>RF00017;Metazoa_SRP;AC096762.3/144094-143812 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 17 tggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaa 76
|||||||| |||||| ||||||||||||||||||||||| |||||||||||| |||
Sbjct: 278 tggagttttgctcttattgcccaggctggagtgcagtggcaccatctcggctcactgcaa 219
Query: 77 cctccgcct 85
|||| ||||
Sbjct: 218 cctctgcct 210
>RF00017;Metazoa_SRP;AADC01046850.1/136-443 9606:Homo sapiens
(human)
Length = 308
Score = 65.9 bits (33), Expect = 1e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 5 ttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctc 64
|||||||||||||||||| || |||| ||||||||||||||||||||| || | ||||
Sbjct: 150 ttatttttgagatggagtctcactct-gttgcccaggctggagtgcagcggcgctatctt 92
Query: 65 ggctcaccacaacctcc 81
||||||| ||||||||
Sbjct: 91 ggctcactgcaacctcc 75
>RF00017;Metazoa_SRP;AADD01097468.1/8694-8976 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||| ||||||||||| |||||||||||||||||| | |||||| ||||||
Sbjct: 276 gagttttgctcttgttgcgcaggctggagtgcagtggtgcgatctcagctcac 224
>RF00017;Metazoa_SRP;CABD01187458.1/578-859 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 65.9 bits (33), Expect = 1e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| | ||||| || ||||||| ||||||||||||| ||||||||||||||
Sbjct: 282 ttgagatggagtctggctct-gtcgcccaggttggagtgcagtggcgtgatctcggctca 224
Query: 71 c 71
|
Sbjct: 223 c 223
>RF00015;U4;ABGA01119897.1/10380-10186 9601:Pongo abelii (Sumatran
orangutan)
Length = 195
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||||| || || |||||||||| ||||||||||||| |||||
Sbjct: 119 tttttttttttgagatggagtctcact--tgttgcccagactggagtgcagtgatgtgat 176
Query: 62 ctcggctc 69
||||||||
Sbjct: 177 ctcggctc 184
>RF00004;U2;ABSL01059125.1/5621-5763 9606:Homo sapiens (human)
Length = 143
Score = 65.9 bits (33), Expect = 1e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 ttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggct 68
|||||||| |||| ||||||| |||||||||||||||||||||||| | |||||||||
Sbjct: 72 ttttgagacagagtctcgctct-gttgcccaggctggagtgcagtggcgcaatctcggct 130
Query: 69 caccacaacctcc 81
||| ||||||||
Sbjct: 131 cactgcaacctcc 143
>RF00017;Metazoa_SRP;ABGA01185172.1/285-566 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacca 73
|||||||||||| || |||| || |||||||||| ||| | | |||||||||||||||||
Sbjct: 280 agatggagtttcactgttgtcgctcaggctggagcgcaatcgcgtgatctcggctcacca 221
Query: 74 caac 77
||||
Sbjct: 220 caac 217
>RF00017;Metazoa_SRP;AADA01208957.1/8525-8806 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 26 gctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||| |||||||||||| ||| |||||||||||||||||||||| ||||
Sbjct: 268 gctcttgttgcctgggctggagtgcaatggcacgatctcggctcaccacaacctctgcct 209
>RF00017;Metazoa_SRP;AACZ02177801.1/22046-21749 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 63.9 bits (32), Expect = 5e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||| ||||| | ||||||||||||||||||||||||| ||| ||
Sbjct: 288 tttttttttttgagacagagtt-cactcttgttgcccaggctggagtgcaatggcacaat 230
Query: 62 ctcggctcaccacaacctccgcct 85
||||||||||| ||||||| ||||
Sbjct: 229 ctcggctcaccgcaacctctgcct 206
>RF00017;Metazoa_SRP;AADA01131324.1/1735-1380 9598:Pan troglodytes
(chimpanzee)
Length = 356
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 38 caggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||| | |||||| |||||| |||||||||||||
Sbjct: 122 caggctggagtgcagtggtgcgatctcagctcactacaacctccgcct 75
>RF00017;Metazoa_SRP;AACZ02053905.1/141850-141546 9598:Pan
troglodytes (chimpanzee)
Length = 305
Score = 63.9 bits (32), Expect = 5e-10
Identities = 45/48 (93%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 5 ttatttttgagatggagtttcgctcttgttgcccaggctggagtgcag 52
|||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 150 ttatttttgagatggagtctcactct-gttgcccaggctggagtgcag 104
>RF00017;Metazoa_SRP;AADA01003203.1/9383-9681 9598:Pan troglodytes
(chimpanzee)
Length = 299
Score = 63.9 bits (32), Expect = 5e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||| ||||| | ||||||||||||||||||||||||| ||| ||
Sbjct: 288 tttttttttttgagacagagtt-cactcttgttgcccaggctggagtgcaatggcacaat 230
Query: 62 ctcggctcaccacaacctccgcct 85
||||||||||| ||||||| ||||
Sbjct: 229 ctcggctcaccgcaacctctgcct 206
>RF00017;Metazoa_SRP;ABSL01057357.1/238468-238749 9606:Homo sapiens
(human)
Length = 282
Score = 63.9 bits (32), Expect = 5e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcctg 86
|||||||| |||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 259 gcccaggcaggagtgcagtggcgtgatctcggctcactgcaacctctgcctg 208
>RF00017;Metazoa_SRP;ABSL01069009.1/74-362 9606:Homo sapiens (human)
Length = 289
Score = 63.9 bits (32), Expect = 5e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||| | ||| || |||| || ||||||||||||||||||||| |||||
Sbjct: 157 tttttttttttgagacgaagtctcactct-gtagcccaggctggagtgcagtggcgtgat 99
Query: 62 ctcggctcaccacaacctccgcct 85
|| ||||||| |||||| |||||
Sbjct: 98 cttggctcactgcaacctacgcct 75
>RF00017;Metazoa_SRP;AADD01056510.1/4188-4470 9606:Homo sapiens
(human)
Length = 283
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 30 ttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||| ||| | ||||| ||||||| ||||||||||||
Sbjct: 265 ttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctccgcct 210
>RF00017;Metazoa_SRP;ABBA01054788.1/2681-2410 9606:Homo sapiens
(human)
Length = 272
Score = 63.9 bits (32), Expect = 5e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| ||||| ||||| |||| | |||||||||||||||||| |||||||||||
Sbjct: 151 tttttgagacggagtctcgct-ttgtcactcaggctggagtgcagtggtgtgatctcggc 93
Query: 68 tcac 71
||||
Sbjct: 92 tcac 89
>RF00017;Metazoa_SRP;AADB02018414.1/51522-51801 9606:Homo sapiens
(human)
Length = 280
Score = 63.9 bits (32), Expect = 5e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacca 73
||||||||||| | |||||||||||||||||||| || ||| | |||||| ||||||
Sbjct: 280 agatggagtttagatcttgttgcccaggctggagcacaatggtgcgatctcagctcactg 221
Query: 74 caacctccgcct 85
||||||||||||
Sbjct: 220 caacctccgcct 209
>RF00017;Metazoa_SRP;ABSL01065897.1/74662-74943 9606:Homo sapiens
(human)
Length = 282
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
||||||| ||||||||||||||||||||||||| || | |||||||||||| |||||
Sbjct: 275 gagtttcactcttgttgcccaggctggagtgcaatgatgcaatctcggctcactgcaacc 216
Query: 79 tccgcctg 86
|| |||||
Sbjct: 215 tctgcctg 208
>RF00017;Metazoa_SRP;CABD01427964.2/1790-1511 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 280
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 36 cccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||||| |||||||||||||||
Sbjct: 124 cccaggctggagtgcagtggtgtgatctcggctcac 89
>RF00017;Metazoa_SRP;CABD01347647.2/4127-4408 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 282 tgagatggagtttcactcttgttgcccaggctggaatgcggtgg 239
>RF00017;Metazoa_SRP;CABD01602017.2/89-371 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 63.9 bits (32), Expect = 5e-10
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatc 62
|||||||||||| ||||||| |||||||||||||||||||| ||| ||||||
Sbjct: 283 ttgagatggagtctcgctct-gttgcccaggctggagtgcaatggcgtgatc 233
>RF00017;Metazoa_SRP;AANU01123929.1/40195-39914 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 63.9 bits (32), Expect = 5e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgc 50
||||||||||||||||||||||||||||||||
Sbjct: 275 gagtttcgctcttgttgcccaggctggagtgc 244
>RF00017;Metazoa_SRP;AANU01248061.1/85213-84931 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 30 ttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||||||||| |||||| |||||| ||||||||||||
Sbjct: 265 ttgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctccgcct 210
>RF00017;Metazoa_SRP;AANU01108321.1/3057-3354 9544:Macaca mulatta
(rhesus monkey)
Length = 298
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||| |||||||| |||||||||||||||||||||||||
Sbjct: 298 tgagacggagtttcactcttgttgcccaggctggagtgca 259
>RF00019;Y_RNA;ABGA01395454.1/679-574 9601:Pongo abelii (Sumatran
orangutan)
Length = 106
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccagg 41
||||| |||||||||||||||||| |||||||||||||||
Sbjct: 42 tttttttttttgagatggagtttcactcttgttgcccagg 3
>RF00017;Metazoa_SRP;ABGA01319971.1/6088-5802 9601:Pongo abelii
(Sumatran orangutan)
Length = 287
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 125 gcccaggctggagtgcagtggcacgatcttggctcaccacaacctctgcct 75
>RF00017;Metazoa_SRP;ABGA01026025.1/1-283 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| ||||||||||||| ||||||| ||||
Sbjct: 264 tgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctcggcct 210
>RF00017;Metazoa_SRP;ABGA01376699.1/6991-7274 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| ||||||| ||||||| |||||||||||| ||| |||||| ||||||
Sbjct: 284 ttgagatggagtctcgctct-gttgcccgggctggagtgcaatggcatgatcttggctca 226
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 225 ctgcaacctctgcct 211
>RF00017;Metazoa_SRP;ABGA01349066.1/1588-1887 9601:Pongo abelii
(Sumatran orangutan)
Length = 300
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 33 ttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
||||||||||||||||||||||| || |||| ||||||| |||||||
Sbjct: 279 ttgcccaggctggagtgcagtggtgtaatcttggctcactacaacct 233
>RF00017;Metazoa_SRP;ABGA01040313.1/34253-33971 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||| |||||||||| |||||||||||||| ||| ||||||||
Sbjct: 264 tgttgcccaggctgaagtgcagtggcttgatctcggctcactccaatctccgcct 210
>RF00017;Metazoa_SRP;ABGA01146174.1/1083-800 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| | |||||| |||||| ||||||| ||||
Sbjct: 265 tgttgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcct 211
>RF00017;Metazoa_SRP;ABGA01015944.1/10578-10296 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||||||| ||||||||||||| ||||||| ||||
Sbjct: 264 tgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcct 210
>RF00017;Metazoa_SRP;AADA01250173.1/1927-1647 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||| ||||||| ||||||| ||||||| ||||
Sbjct: 258 gcccaggctggagtgcagtggtgtgatcttggctcactgcaacctctgcct 208
>RF00017;Metazoa_SRP;AACZ02021234.1/28696-28417 9598:Pan troglodytes
(chimpanzee)
Length = 280
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 1 atttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||| ||||||||| ||||| | ||||| ||||||||||||||||||||||||
Sbjct: 158 atttttttttttgagacggagtcttgctct-gttgcccaggctggagtgcagtgg 105
>RF00017;Metazoa_SRP;AACZ02160650.1/2-283 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacc 78
|||||| | ||||||||| |||||||||||||| ||| | ||||||||||||| |||||
Sbjct: 275 gagttttggtcttgttgcgcaggctggagtgcaatggtgggatctcggctcacagcaacc 216
Query: 79 tccgcct 85
|| ||||
Sbjct: 215 tctgcct 209
>RF00017;Metazoa_SRP;AACZ02187545.1/3195-2914 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 23 ttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccg 82
|||||| |||||| ||||||||||||||| || | |||||| ||||||| |||||||||
Sbjct: 271 ttcgctgttgttgtccaggctggagtgcaaaggcgcgatctcagctcaccgcaacctccg 212
Query: 83 cct 85
|||
Sbjct: 211 cct 209
>RF00017;Metazoa_SRP;AADA01169128.1/518-817 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 33 ttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
||||||||||||||||||||||| || |||| ||||||| |||||||
Sbjct: 279 ttgcccaggctggagtgcagtggtgtaatcttggctcactacaacct 233
>RF00017;Metazoa_SRP;AADA01295124.1/23-305 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||| |||||||| |||||||| |||||||| |||||| ||||||||||||
Sbjct: 264 tgttgcctaggctggactgcagtggcgtgatctctgctcactgcaacctccgcct 210
>RF00017;Metazoa_SRP;AACZ02150153.1/41116-40818 9598:Pan troglodytes
(chimpanzee)
Length = 299
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||| ||| ||||||||||||||| ||||||| ||||
Sbjct: 257 gcccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcct 207
>RF00017;Metazoa_SRP;AC079176.15/137643-137361 9606:Homo sapiens
(human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 27 ctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||||||||||||||||| | ||||| |||||| ||||||||
Sbjct: 268 ctcttgttgcccaggctggagtgcagtggtgcgatcttagctcactgcaacctcc 214
>RF00017;Metazoa_SRP;ABBA01047241.1/7992-8274 9606:Homo sapiens
(human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||| ||||||| | ||||||||||||| ||||||||||||
Sbjct: 260 gcccaggctggagcgcagtggtgcgatctcggctcactgcaacctccgcct 210
>RF00017;Metazoa_SRP;AADB02012959.1/461482-461201 9606:Homo sapiens
(human)
Length = 282
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 259 gcccaggctggagtgcagtggcgtgatctcagctcacagcaacctcc 213
>RF00017;Metazoa_SRP;AADB02018056.1/11135-11417 9606:Homo sapiens
(human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| | ||||| || |||||||||||||||||||| | ||||||||||||
Sbjct: 283 ttgagatggagtcttgctct-gtcacccaggctggagtgcagtggcgcgatctcggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 gcctgggtgacagagcaagactc 104
|||||||||||||||||||||||
Sbjct: 253 gcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AADD01102462.1/25609-25327 9606:Homo sapiens
(human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| | ||||| || |||||||||||||||||||| | ||||||||||||
Sbjct: 283 ttgagatggagtcttgctct-gtcacccaggctggagtgcagtggcgcgatctcggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 gcctgggtgacagagcaagactc 104
|||||||||||||||||||||||
Sbjct: 253 gcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AL162732.43/134760-134478 9606:Homo sapiens
(human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
|||||||||||| | ||||| || |||||||||||||||||||| | ||||||||||||
Sbjct: 283 ttgagatggagtcttgctct-gtcacccaggctggagtgcagtggcgcgatctcggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 gcctgggtgacagagcaagactc 104
|||||||||||||||||||||||
Sbjct: 253 gcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABBA01074322.1/20848-20555 9606:Homo sapiens
(human)
Length = 294
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 129 tgttgcccaggctggagtgcagtggcgcaatctcggctcactgcaacctcc 79
>RF00017;Metazoa_SRP;AADB02013261.1/2261994-2261712 9606:Homo
sapiens (human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
||||||||||||||| |||| || |||||||||||||||||||| | |||||||||||
Sbjct: 283 ttgagatggagtttcactct-gtcacccaggctggagtgcagtggtgcaatctcggctca 225
Query: 71 ccacaacctccgcct 85
| ||||||| ||||
Sbjct: 224 ctgcaacctctgcct 210
>RF00017;Metazoa_SRP;AC011443.6/4341-4623 9606:Homo sapiens (human)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||| |||||||| | ||||||||||||| ||||||| ||||
Sbjct: 264 tgttgcccaggctggaatgcagtggtgcgatctcggctcactgcaacctctgcct 210
>RF00017;Metazoa_SRP;AADD01162292.1/10312-10024 9606:Homo sapiens
(human)
Length = 289
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||| ||||||||||| ||||||| ||||||| ||||||||
Sbjct: 128 tgttgcccaggctagagtgcagtggtgtgatcttggctcactgcaacctcc 78
>RF00017;Metazoa_SRP;CABD01290083.2/337-622 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 286
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||| ||| | ||||||||||||| ||||||| ||||
Sbjct: 267 tgttgcccaggctggagtgcaatggtgcgatctcggctcactgcaacctctgcct 213
>RF00017;Metazoa_SRP;CABD01098373.1/4907-5189 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 23 ttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccg 82
||||||||||| |||||||||||||||| ||| | |||||| |||||| |||||||||
Sbjct: 272 ttcgctcttgtcccccaggctggagtgcaatggcgcgatctcagctcactgcaacctccg 213
Query: 83 cct 85
|||
Sbjct: 212 cct 210
>RF00017;Metazoa_SRP;AANU01272731.1/4934-4624 9544:Macaca mulatta
(rhesus monkey)
Length = 311
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 5 ttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||||||| ||||| || |||| ||||||||||||||||||||||||
Sbjct: 150 ttatttttgagacggagtctcactct-gttgcccaggctggagtgcagtgg 101
>RF00017;Metazoa_SRP;AANU01204489.1/18176-18458 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||||| |||||||| |||||| ||||||| ||||
Sbjct: 260 gcccaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcct 210
>RF00017;Metazoa_SRP;ABGA01085038.1/2434-2153 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 36 cccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||| | ||||||||||||| ||||||| ||||
Sbjct: 258 cccaggctggagtgcagtggtgcgatctcggctcactgcaacctctgcct 209
>RF00017;Metazoa_SRP;ABGA01207861.1/159-440 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 14 agatggagtttcgctcttgttgcccaggctggagtgca 51
|||||||| ||||||||| |||||||||||||||||||
Sbjct: 280 agatggagcttcgctcttattgcccaggctggagtgca 243
>RF00017;Metazoa_SRP;ABGA01062811.1/1989-1705 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 60.0 bits (30), Expect = 8e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||| ||| |||||||||||||||| ||||||||| |||||| ||| |||||| ||
Sbjct: 152 ttttttagacggagtttcgctcttgtcacccaggctgcagtgcaatggtacgatctcagc 93
Query: 68 tcaccacaacctccgcct 85
|||| ||||||||||||
Sbjct: 92 tcactgcaacctccgcct 75
>RF00017;Metazoa_SRP;ABGA01284229.1/7715-7434 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 12 tgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| ||||||| || |||||||||||||| ||| | |||| |||||||
Sbjct: 282 tgagatggagtttcactcttgtcgctcaggctggagtgcaatggcgccatcttggctcac 223
Query: 72 cacaacctccgcct 85
||||||| ||||
Sbjct: 222 agcaacctctgcct 209
>RF00017;Metazoa_SRP;AACZ02134052.1/6279-6003 9598:Pan troglodytes
(chimpanzee)
Length = 277
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 36 cccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 123 cccaggctggagtgcagtggcgccatctcggctcactgcaacctccgcct 74
>RF00017;Metazoa_SRP;AADA01306243.1/7869-7589 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 60.0 bits (30), Expect = 8e-09
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggct 68
||||||||||||||| || || ||||||||||||||||||| ||| ||||||| ||||
Sbjct: 281 ttgagatggagtttcactttt-ttgcccaggctggagtgcaatggcgtgatcttggct 225
>RF00017;Metazoa_SRP;AACZ02148834.1/216-549 9598:Pan troglodytes
(chimpanzee)
Length = 334
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgca 51
||||| ||| ||||| |||||||||||||||||||||||||||| ||||
Sbjct: 155 tttttttttctgagacagagtttcgctcttgttgcccaggctggaatgca 106
>RF00017;Metazoa_SRP;ABBA01005081.1/46261-46548 9606:Homo sapiens
(human)
Length = 288
Score = 60.0 bits (30), Expect = 8e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
||||| ||||||||| ||||| | ||||| ||||||||||||||||||||||||
Sbjct: 160 tttttttttttgagacggagtcttgctct-gttgcccaggctggagtgcagtgg 108
>RF00017;Metazoa_SRP;AADB02006705.1/5374-5657 9606:Homo sapiens
(human)
Length = 284
Score = 60.0 bits (30), Expect = 8e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||| ||| |||||||||||||||||||||||||
Sbjct: 278 ggagtttcactcatgttgcccaggctggagtgcagtgg 241
>RF00017;Metazoa_SRP;ABSL01047931.1/65695-65972 9606:Homo sapiens
(human)
Length = 278
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggct 68
||||||| ||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 271 gagtttcactcttgttgcccaggctggagtgcaatggcacgatctcggct 222
>RF00017;Metazoa_SRP;AL157409.16/111858-111575 9606:Homo sapiens
(human)
Length = 284
Score = 60.0 bits (30), Expect = 8e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 24 tcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgc 83
|||||||||| |||||||||||||||| ||| | ||||||||||||| ||||||| ||
Sbjct: 271 tcgctcttgtaccccaggctggagtgcaatggtgcgatctcggctcactgcaacctctgc 212
Query: 84 ct 85
||
Sbjct: 211 ct 210
>RF00017;Metazoa_SRP;CABD01261749.1/635-919 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 285
Score = 60.0 bits (30), Expect = 8e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 20 agtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcaccacaacct 79
||||| ||||||||||||| |||||||||||| ||| | |||| ||||||| ||||||
Sbjct: 277 agttttgctcttgttgcccgggctggagtgcaatggtgccatcttggctcactgcaacct 218
Query: 80 ccgcct 85
||||||
Sbjct: 217 ccgcct 212
>RF00017;Metazoa_SRP;CABD01439072.1/559-274 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 286
Score = 60.0 bits (30), Expect = 8e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 18 ggagtttcgctcttgttgcccaggctggagtgca 51
||||||||||||||||||||||||||| ||||||
Sbjct: 282 ggagtttcgctcttgttgcccaggctgcagtgca 249
>RF00017;Metazoa_SRP;CABD01145293.1/2651-2362 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 290
Score = 60.0 bits (30), Expect = 8e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 82 gcctgggtgacagagcaagactctgtctga 111
||||||||||||||||||||||||||||||
Sbjct: 260 gcctgggtgacagagcaagactctgtctga 289
>RF00017;Metazoa_SRP;CABD01198587.1/3422-3699 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 278
Score = 60.0 bits (30), Expect = 8e-09
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
||||| ||||||||| |||||||| |||| |||||||||||||| |||||||||
Sbjct: 156 tttttttttttgagagggagtttcactct-gttgcccaggctggcgtgcagtgg 104
>RF00017;Metazoa_SRP;CABD01334856.2/956-654 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 303
Score = 60.0 bits (30), Expect = 8e-09
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 1 atttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg-agtg 59
|||||| ||||||||||||||| |||||| || ||||||||||||| ||| ||| ||||
Sbjct: 294 atttttttttttgagatggagtctcgctc-tgaggcccaggctggagggcaatggcagtg 236
Query: 60 atctcggctcaccacaacctccgcct 85
||||| |||||| ||||||| ||||
Sbjct: 235 atctcagctcactgcaacctctgcct 210
>RF00017;Metazoa_SRP;AANU01212875.1/19509-19790 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 60.0 bits (30), Expect = 8e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 36 cccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||||||| ||||||| ||||||| ||||||| ||||
Sbjct: 258 cccaggctggagtgcagtggcgtgatcttggctcactgcaacctctgcct 209
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 82 gcctgggtgacagagcaagactctgtct 109
||||||||||||||||||||||||||||
Sbjct: 252 gcctgggtgacagagcaagactctgtct 279
>RF00017;Metazoa_SRP;AANU01283265.1/4573-4851 9544:Macaca mulatta
(rhesus monkey)
Length = 279
Score = 60.0 bits (30), Expect = 8e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 8 tttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggc 67
||||||||| |||| || ||||||| |||||||||||||||||||| | ||||||||
Sbjct: 152 tttttgagacagagtctcactcttgtcacccaggctggagtgcagtggcgcaatctcggc 93
Query: 68 tcaccacaacctcc 81
|||| ||||||||
Sbjct: 92 tcactgcaacctcc 79
>RF00015;U4;AP000717.5/12940-12724 9606:Homo sapiens (human)
Length = 217
Score = 60.0 bits (30), Expect = 8e-09
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||||| | ||| | ||||||||| ||||||||||||| | |||
Sbjct: 114 tttttttttttgagatggagtcttgctgt-gttgcccagactggagtgcagtgatgcgat 172
Query: 62 ctcggctcac 71
||||||||||
Sbjct: 173 ctcggctcac 182
>RF00017;Metazoa_SRP;ABGA01157170.1/890-1172 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 33 ttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||| |||||||||| | ||||||||||||| ||||||| ||||
Sbjct: 262 ttgcccaggctgtagtgcagtggcgcgatctcggctcactgcaacctctgcct 210
>RF00017;Metazoa_SRP;ABGA01218695.1/14472-14118 9601:Pongo abelii
(Sumatran orangutan)
Length = 355
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 37 ccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||||||| || | |||||| ||||||| ||||||||||||
Sbjct: 123 ccaggctggagtgcagaggtgcgatctcagctcaccgcaacctccgcct 75
>RF00017;Metazoa_SRP;ABGA01162754.1/15088-15368 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 33 ttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||||||||||| | ||||| ||||||| ||||||||
Sbjct: 127 ttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctcc 79
>RF00017;Metazoa_SRP;ABGA01385003.1/8363-8640 9601:Pongo abelii
(Sumatran orangutan)
Length = 278
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 41 gctggagtgcagtggagtgatctcggctcaccacaacctcc 81
||||||||||||||| |||||||||||||| |||||||||
Sbjct: 119 gctggagtgcagtggcctgatctcggctcactacaacctcc 79
>RF00017;Metazoa_SRP;ABGA01033679.1/8172-7892 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 58.0 bits (29), Expect = 3e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 13 gagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctcacc 72
|||||||||| | ||||| || ||||||||||||||||||||| | ||||||||||||
Sbjct: 281 gagatggagtcttgctct-gtcgcccaggctggagtgcagtggcgcaatctcggctcact 223
Query: 73 acaacctccgcct 85
||||||| ||||
Sbjct: 222 gcaacctctgcct 210
>RF00017;Metazoa_SRP;AACZ02065039.1/28437-28719 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 264 tgttgcccaggctggagtgcaatggagcgatcttggctcac 224
>RF00017;Metazoa_SRP;AACZ02141705.1/15395-15695 9598:Pan troglodytes
(chimpanzee)
Length = 301
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgca 51
|||||| ||||||||||||||||||||||||||
Sbjct: 275 gagtttagctcttgttgcccaggctggagtgca 243
>RF00017;Metazoa_SRP;AADA01055611.1/9161-9444 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgca 51
|||||| ||||||||||||||||||||||||||
Sbjct: 277 gagttttgctcttgttgcccaggctggagtgca 245
>RF00017;Metazoa_SRP;AACZ02178435.1/37297-37014 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 19 gagtttcgctcttgttgcccaggctggagtgca 51
||||||| |||||||||||||||||||||||||
Sbjct: 277 gagtttcactcttgttgcccaggctggagtgca 245
>RF00017;Metazoa_SRP;AC216066.3/52272-52554 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||||||||||| | |||||||||||||||
Sbjct: 264 tgttgcccaggctggagtgcagcgtcgtgatctcggctcac 224
>RF00017;Metazoa_SRP;AACZ02012885.1/24458-24739 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 263 tgttgcccaggctggagtgcagtggcttgatctcagctcac 223
>RF00017;Metazoa_SRP;AADA01252628.1/3222-2940 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 tgttgcccaggctggagtgcagtggtacgatctcggctcac 224
>RF00017;Metazoa_SRP;AADA01043475.1/5398-5680 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 264 tgttgcccaggcaggagtgcagtggcgtgatctcagctcac 224
>RF00017;Metazoa_SRP;AL162586.26/43059-42783 9606:Homo sapiens
(human)
Length = 277
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||||||||||| |||||||||| | |||||||||||||
Sbjct: 258 tgttgcccaggctgaagtgcagtggtgagatctcggctcac 218
>RF00017;Metazoa_SRP;AADC01130061.1/7118-6836 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 33 ttgcccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
|||||||||||| |||||||||| |||||||| |||||| ||||||| ||||
Sbjct: 262 ttgcccaggctgtagtgcagtggtgtgatctcagctcactgcaacctctgcct 210
>RF00017;Metazoa_SRP;AC034259.7/96418-96698 9606:Homo sapiens
(human)
Length = 281
Score = 58.0 bits (29), Expect = 3e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgatctcggctca 70
||||||||||||||| ||||| ||||||||||| ||||| | ||| ||||||| ||||||
Sbjct: 281 ttgagatggagtttcactctt-ttgcccaggctagagtgtaatggcgtgatcttggctca 223
Query: 71 c 71
|
Sbjct: 222 c 222
>RF00017;Metazoa_SRP;ABSL01022297.1/5514-5788 9606:Homo sapiens
(human)
Length = 275
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 37 ccaggctggagtgcagtggagtgatctcggctcaccacaacctccgcct 85
||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 123 ccaggctggagtgcagtggcaggatctcggctcactgcaacctccgcct 75
>RF00017;Metazoa_SRP;ABBA01045915.1/13370-13653 9606:Homo sapiens
(human)
Length = 284
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
|||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 265 tgttgctcaggctggagtgtagtggtgtgatctcggctcac 225
>RF00017;Metazoa_SRP;AADB02002874.1/204472-204774 9606:Homo sapiens
(human)
Length = 303
Score = 58.0 bits (29), Expect = 3e-08
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg-agtga 60
||||| ||||||||||||||| |||||| || ||||||||||||| ||| ||| ||||
Sbjct: 292 tttttttttttgagatggagtctcgctc-tgaggcccaggctggagggcaatggcggtga 234
Query: 61 tctcggctcaccacaacctccgcct 85
||||||||||| ||||||| ||||
Sbjct: 233 tctcggctcactgcaacctctgcct 209
>RF00017;Metazoa_SRP;ABBA01069196.1/132324-132042 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 11 ttgagatggagtttcgctcttgttgcccaggctggagtgcagtgg 55
|||||||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 283 ttgagatggaatctcgctct-gttgcccaggctggagtgcagtgg 240
>RF00017;Metazoa_SRP;AADC01117423.1/758827-758524 9606:Homo sapiens
(human)
Length = 304
Score = 58.0 bits (29), Expect = 3e-08
Identities = 71/84 (84%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 2 tttttatttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggagtgat 61
||||| ||||||||||||| ||| |||| |||||||||||||||||||| ||| ||
Sbjct: 293 tttttttttttgagatggaattttgctc--gttgcccaggctggagtgcaatggcacaat 236
Query: 62 ctcggctcaccacaacctccgcct 85
|| |||||||| ||||||| ||||
Sbjct: 235 cttggctcaccgcaacctctgcct 212
>RF00017;Metazoa_SRP;AADC01113928.1/198072-197791 9606:Homo sapiens
(human)
Length = 282
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 31 tgttgcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 263 tgttgcccaggctggagtgcaatggtgtgatcttggctcac 223
>RF00017;Metazoa_SRP;AADB02013304.1/59422-59704 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 35 gcccaggctggagtgcagtggagtgatctcggctcac 71
||||||||||||||||||||| | |||||||||||||
Sbjct: 260 gcccaggctggagtgcagtggcgcgatctcggctcac 224
