miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;AANU01212875.1/19509-19790 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||||||||||||||||
Sbjct: 244 gcactccagcctgggtgacagagcaagactctgtct 279
>RF00017;Metazoa_SRP;ABGA01141226.1/3408-3111 9601:Pongo abelii
(Sumatran orangutan)
Length = 298
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgt 77
||||||||||| ||||||||||||||||||||||
Sbjct: 110 gcactccagcctgggtgacagagcaagactctgt 143
>RF00017;Metazoa_SRP;ABBA01020160.1/24340-24621 9606:Homo sapiens
(human)
Length = 282
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| ||||||||||||||||||||||||
Sbjct: 246 actccagcctgggtgacagagcaagactctgtct 279
>RF00017;Metazoa_SRP;AADC01047521.1/166550-166837 9606:Homo sapiens
(human)
Length = 288
Score = 58.0 bits (29), Expect = 2e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtctt 80
||||||||||| ||||||||||||||||||| |||||
Sbjct: 250 gcactccagcctgggtgacagagcaagactccgtctt 286
>RF00017;Metazoa_SRP;ABGA01172272.1/9412-9694 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactct 75
||||||||||| ||||||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagactct 276
>RF00017;Metazoa_SRP;ABGA01265337.1/4413-4694 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||||||||||||||||
Sbjct: 244 gcactccagcctaggtgacagagcaagactctgtct 279
>RF00017;Metazoa_SRP;ABGA01095204.1/17559-17841 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 tccagcccgggtgacagagcaagactctgtct 79
||||||| ||||||||||||||||||||||||
Sbjct: 249 tccagcctgggtgacagagcaagactctgtct 280
>RF00017;Metazoa_SRP;AADA01079623.1/10445-10731 9598:Pan troglodytes
(chimpanzee)
Length = 287
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||||||| ||||||||||||||| ||||
Sbjct: 249 gcactccagcccgggcgacagagcaagactccgtct 284
>RF00017;Metazoa_SRP;AADA01187409.1/9085-8803 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactct 75
||||||||||| ||||||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagactct 276
>RF00017;Metazoa_SRP;AADA01082877.1/12416-12136 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| | ||||||||||||||||||||||
Sbjct: 243 gcactccagcctgagtgacagagcaagactctgtct 278
>RF00017;Metazoa_SRP;AADA01008014.1/760-478 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| ||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagtaagactctgtct 280
>RF00017;Metazoa_SRP;ABSL01045524.1/410-121 9606:Homo sapiens
(human)
Length = 290
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||||||| |||||||||
Sbjct: 110 gcactccagcctgggtgacagagcaatactctgtct 145
>RF00017;Metazoa_SRP;ABBA01031768.1/44728-45012 9606:Homo sapiens
(human)
Length = 285
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||||||||||| ||||
Sbjct: 247 gcactccagcctgggtgacagagcaagactccgtct 282
>RF00017;Metazoa_SRP;ABBA01039597.1/45953-45684 9606:Homo sapiens
(human)
Length = 270
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactct 75
|||||||||||| |||||||||||||||||||
Sbjct: 110 gcactccagcccaggtgacagagcaagactct 141
>RF00017;Metazoa_SRP;ABBA01005882.1/5078-5354 9606:Homo sapiens
(human)
Length = 277
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||||||||| ||||||
Sbjct: 110 gcactccagcctgggtgacagagcaagaccctgtct 145
>RF00017;Metazoa_SRP;ABBA01028980.1/11771-11491 9606:Homo sapiens
(human)
Length = 281
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||||||||||||||||
Sbjct: 243 gcactccagcctaggtgacagagcaagactctgtct 278
>RF00017;Metazoa_SRP;AADD01150616.1/16450-16738 9606:Homo sapiens
(human)
Length = 289
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||||||| |||||||||
Sbjct: 110 gcactccagcctgggtgacagagcaatactctgtct 145
>RF00017;Metazoa_SRP;CABD01145293.1/2651-2362 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 290
Score = 56.0 bits (28), Expect = 9e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 tccagcccgggtgacagagcaagactctgtct 79
||||||| ||||||||||||||||||||||||
Sbjct: 256 tccagcctgggtgacagagcaagactctgtct 287
>RF00017;Metazoa_SRP;ABGA01216320.1/8744-8462 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| |||||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AADB02018056.1/11135-11417 9606:Homo sapiens
(human)
Length = 283
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| |||||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AADD01102462.1/25609-25327 9606:Homo sapiens
(human)
Length = 283
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| |||||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AL162732.43/134760-134478 9606:Homo sapiens
(human)
Length = 283
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| |||||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABGA01177534.1/7970-7688 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactct 75
||||||||| ||||||||||||||||||||
Sbjct: 247 actccagcctgggtgacagagcaagactct 276
>RF00017;Metazoa_SRP;AADB02008084.1/44190-43904 9606:Homo sapiens
(human)
Length = 287
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| ||| ||||||||||||||||||||
Sbjct: 251 actccagcctgggcgacagagcaagactctgtct 284
>RF00017;Metazoa_SRP;ABBA01034472.1/94407-94689 9606:Homo sapiens
(human)
Length = 283
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| ||||||||||||||||||| ||||
Sbjct: 247 actccagcctgggtgacagagcaagactccgtct 280
>RF00017;Metazoa_SRP;ABBA01055032.1/8237-8520 9606:Homo sapiens
(human)
Length = 284
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgt 77
||||| ||||| ||||||||||||||||||||||
Sbjct: 246 gcactgcagcctgggtgacagagcaagactctgt 279
>RF00017;Metazoa_SRP;AADC01009840.1/7346-7628 9606:Homo sapiens
(human)
Length = 283
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| ||| ||||||||||||||||||||
Sbjct: 247 actccagcctgggcgacagagcaagactctgtct 280
>RF00017;Metazoa_SRP;AACZ02130640.1/1563-1266 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 47 ctccagcccgggtgacagagcaagactctgtct 79
|||||||| ||| ||||||||||||||||||||
Sbjct: 246 ctccagcctgggcgacagagcaagactctgtct 278
>RF00017;Metazoa_SRP;AACZ02132279.1/8599-8317 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtctt 80
||||||||||| ||| |||||||| ||||||||||||
Sbjct: 245 gcactccagcctgggcgacagagcgagactctgtctt 281
>RF00017;Metazoa_SRP;AADC01025049.1/6196-6478 9606:Homo sapiens
(human)
Length = 283
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagac 72
||||||||||| |||||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaagac 273
>RF00017;Metazoa_SRP;AANU01283611.1/736-444 9544:Macaca mulatta
(rhesus monkey)
Length = 293
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactc 74
||||||||| |||||||||||||||||||
Sbjct: 257 actccagcctgggtgacagagcaagactc 285
>RF00017;Metazoa_SRP;AANU01105175.1/9945-9665 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctg 76
||||||||||| ||| |||||||||||||||||
Sbjct: 243 gcactccagcctgggcgacagagcaagactctg 275
>RF00017;Metazoa_SRP;AANU01194555.1/9029-8746 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtctt 80
||||||||||| ||| ||||||||||||||| |||||
Sbjct: 246 gcactccagcctgggcgacagagcaagactccgtctt 282
>RF00017;Metazoa_SRP;ABGA01255151.1/8211-7930 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| ||||||||||||||| ||||
Sbjct: 244 gcactccagcctgggcgacagagcaagactccgtct 279
>RF00017;Metazoa_SRP;ABGA01054859.1/6382-6661 9601:Pongo abelii
(Sumatran orangutan)
Length = 280
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 242 gcactccagcctgggtgacagagtgagactctgtct 277
>RF00017;Metazoa_SRP;ABGA01141136.1/2459-2170 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||||| |||||| ||||
Sbjct: 110 gcactccagcctgggtgacagagcgagactccgtct 145
>RF00017;Metazoa_SRP;ABGA01189266.1/1283-1563 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 243 gcactccagccagggtgacagagtgagactctgtct 278
>RF00017;Metazoa_SRP;ABGA01067256.1/4913-4635 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| |||||||| |||||||||||
Sbjct: 241 gcactccagcctgggcgacagagcgagactctgtct 276
>RF00017;Metazoa_SRP;ABGA01024319.1/3420-3703 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 246 gcactccagcctgggtgacagagtgagactctgtct 281
>RF00017;Metazoa_SRP;ABGA01391766.1/7562-7278 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| ||||||||||||||| ||||
Sbjct: 247 gcactccagcctgggcgacagagcaagactccgtct 282
>RF00017;Metazoa_SRP;ABGA01014693.1/1591-1309 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 245 gcactccagcctgggtgacagagtgagactctgtct 280
>RF00017;Metazoa_SRP;AACZ02043925.1/33237-32935 9598:Pan troglodytes
(chimpanzee)
Length = 303
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| |||||||||| |||||||||
Sbjct: 246 gcactccagcctgggagacagagcaaaactctgtct 281
>RF00017;Metazoa_SRP;AACZ02075603.1/13997-14269 9598:Pan troglodytes
(chimpanzee)
Length = 273
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 235 gcactccagcctgggtgacagagtgagactctgtct 270
>RF00017;Metazoa_SRP;AADA01011428.1/7525-7243 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||| |||||||| ||||
Sbjct: 245 gcactccagcctgggtgacagaacaagactccgtct 280
>RF00017;Metazoa_SRP;AACZ02154330.1/4044-3762 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||| ||||| |||||||| |||||||||||||||
Sbjct: 245 gcactgcagcctgggtgacaaagcaagactctgtct 280
>RF00017;Metazoa_SRP;AC195530.3/659-953 9598:Pan troglodytes
(chimpanzee)
Length = 295
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||| |||||| ||||||||||||
Sbjct: 257 gcactccagcctgggtaacagagtaagactctgtct 292
>RF00017;Metazoa_SRP;AADA01114716.1/5515-5233 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||| ||||| |||||||| |||||||||||||||
Sbjct: 245 gcactgcagcctgggtgacaaagcaagactctgtct 280
>RF00017;Metazoa_SRP;AACZ02005603.1/12096-12395 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||| | ||||||||||||||||||| ||||
Sbjct: 243 gcactccagactgggtgacagagcaagactccgtct 278
>RF00017;Metazoa_SRP;AADA01002908.1/3722-3440 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| |||||||||||||| |||||
Sbjct: 245 gcactccagcctgggcgacagagcaagactgtgtct 280
>RF00017;Metazoa_SRP;AACZ02111432.1/5472-5754 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
|||||||||||| ||||||||||| |||||| ||||
Sbjct: 245 gcactccagcccaggtgacagagcgagactccgtct 280
>RF00017;Metazoa_SRP;AADB02018502.1/111428-111708 9606:Homo sapiens
(human)
Length = 281
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| ||||||||||||||| ||||
Sbjct: 243 gcactccagcctgggcgacagagcaagactccgtct 278
>RF00017;Metazoa_SRP;AL117344.12/53999-53717 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 48 tccagcccgggtgacagagcaagactctgtct 79
||||||| ||| ||||||||||||||||||||
Sbjct: 249 tccagcctgggcgacagagcaagactctgtct 280
>RF00017;Metazoa_SRP;AK057594.1/1557-1837 9606:Homo sapiens (human)
Length = 281
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| ||||||||||||||| ||||
Sbjct: 243 gcactccagcctgggcgacagagcaagactccgtct 278
>RF00017;Metazoa_SRP;ABSL01070932.1/5777-6059 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 245 gcactccagcctgggtgacagagtgagactctgtct 280
>RF00017;Metazoa_SRP;AADC01003362.1/5618-5894 9606:Homo sapiens
(human)
Length = 277
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||||||| | ||||||
Sbjct: 109 gcactccagcctgggtgacagagcaagtccctgtct 144
>RF00017;Metazoa_SRP;ABBA01038406.1/5117-5399 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||| ||||| |||||||| |||||||||||||||
Sbjct: 245 gcactgcagcctgggtgacaaagcaagactctgtct 280
>RF00017;Metazoa_SRP;AADD01037841.1/13600-13316 9606:Homo sapiens
(human)
Length = 285
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| | ||||||||||||||| ||||||
Sbjct: 247 gcactccagcctgagtgacagagcaagaccctgtct 282
>RF00017;Metazoa_SRP;AADB02009732.1/81584-81866 9606:Homo sapiens
(human)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| |||||||||||||||||||
Sbjct: 245 gcactccagcctgggcaacagagcaagactctgtct 280
>RF00017;Metazoa_SRP;CABD01427964.2/1790-1511 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 280
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| |||||||||||| |||||| ||||
Sbjct: 110 gcactccagcctgggtgacagagcgagactccgtct 145
>RF00017;Metazoa_SRP;CABD01014788.1/6794-7076 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgt 77
||||||| | ||||||||||||||||||||||
Sbjct: 247 actccagtctgggtgacagagcaagactctgt 278
>RF00017;Metazoa_SRP;CABD01344972.2/2480-2782 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 303
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||| |||||||||| |||||||||
Sbjct: 245 gcactccagcctgggagacagagcaaaactctgtct 280
>RF00017;Metazoa_SRP;AANU01236619.1/11775-12057 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| |||||||||||
Sbjct: 245 gcactccagcctgggtgacagagtgagactctgtct 280
>RF00017;Metazoa_SRP;AANU01232491.1/12086-12368 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
||||||||||| ||||||||||| | ||||||||||
Sbjct: 245 gcactccagcctgggtgacagagtatgactctgtct 280
>RF00017;Metazoa_SRP;AANU01267855.1/1623-1923 9544:Macaca mulatta
(rhesus monkey)
Length = 301
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
|||||||||| ||||||||||||||| ||||||||
Sbjct: 244 gcactccagcgtgggtgacagagcaaggctctgtct 279
>RF00045;SNORA73;ABRT010232023.1/6302-6098 9478:Tarsius syrichta
(Philippine tarsier)
Length = 205
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgtct 79
|||||||| || ||||||||||||||||| ||||||
Sbjct: 71 gcactccaccctgggtgacagagcaagaccctgtct 106
>RF00017;Metazoa_SRP;ABGA01033679.1/8172-7892 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| ||| |||||||||||||||
Sbjct: 245 gcactccagcctgggcgacagagcaagactc 275
>RF00017;Metazoa_SRP;AC068722.6/3090-2807 9606:Homo sapiens (human)
Length = 284
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||||||| ||||||||||||||
Sbjct: 245 gcactccagcccgggcaacagagcaagactc 275
>RF00017;Metazoa_SRP;AADD01174862.1/2022-2305 9606:Homo sapiens
(human)
Length = 284
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| ||| |||||||||||||||
Sbjct: 246 gcactccagcctgggcgacagagcaagactc 276
>RF00017;Metazoa_SRP;ABBA01042561.1/12853-12565 9606:Homo sapiens
(human)
Length = 289
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| |||||||||||| ||||||
Sbjct: 251 gcactccagcctgggtgacagagccagactc 281
>RF00017;Metazoa_SRP;AL022323.7/46269-46551 9606:Homo sapiens
(human)
Length = 283
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| ||| |||||||||||||||
Sbjct: 245 gcactccagcctgggcgacagagcaagactc 275
>RF00017;Metazoa_SRP;CABD01145890.1/7107-6825 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| |||||||||| ||||||||
Sbjct: 245 gcactccagcctgggtgacagaacaagactc 275
>RF00017;Metazoa_SRP;AANU01293401.1/70984-71266 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactc 74
||||||||||| | |||||||||||||||||
Sbjct: 245 gcactccagcctgagtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AANU01049102.1/520-821 9544:Macaca mulatta
(rhesus monkey)
Length = 302
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaag 70
||||||||||| |||||||||||||||
Sbjct: 245 gcactccagcctgggtgacagagcaag 271
>RF00017;Metazoa_SRP;AANU01268800.1/47177-46894 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 ctccagcccgggtgacagagcaagactctgt 77
|||||||| |||||||| |||||||||||||
Sbjct: 249 ctccagcctgggtgacaaagcaagactctgt 279
>RF00017;Metazoa_SRP;ABDC01524278.1/508-207 30608:Microcebus murinus
(gray mouse lemur)
Length = 302
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| ||| |||||||||||||||||||
Sbjct: 266 actccagcctgggcaacagagcaagactctgtct 299
>RF00017;Metazoa_SRP;ABGA01148240.1/6183-5903 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagact 73
||||||||||| ||| ||||||||||||||
Sbjct: 245 gcactccagcctgggcgacagagcaagact 274
>RF00017;Metazoa_SRP;AACZ02112558.1/5910-6203 9598:Pan troglodytes
(chimpanzee)
Length = 294
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagact 73
||||||||||| |||||||||||| |||||
Sbjct: 110 gcactccagcctgggtgacagagcgagact 139
>RF00017;Metazoa_SRP;AACZ02170952.1/22613-22896 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgt 77
||||| ||||| || |||||||||||||||||||
Sbjct: 246 gcactgcagcctggatgacagagcaagactctgt 279
>RF00017;Metazoa_SRP;AACZ02114187.1/25615-25895 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagact 73
||||||||||| |||||||| |||||||||
Sbjct: 245 gcactccagcctgggtgacaaagcaagact 274
>RF00017;Metazoa_SRP;AL358612.9/35723-35431 9606:Homo sapiens
(human)
Length = 293
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagact 73
||||||||||| |||||||||||| |||||
Sbjct: 110 gcactccagcctgggtgacagagcgagact 139
>RF00017;Metazoa_SRP;AC138417.3/10028-9739 9606:Homo sapiens (human)
Length = 290
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagactctgt 77
||||||||||| ||| |||||||||||||||||
Sbjct: 252 gcactccagcctgggcaacagagcaagactctgt 285
>RF00017;Metazoa_SRP;ABSL01047875.1/79690-79970 9606:Homo sapiens
(human)
Length = 281
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 gcactccagcccgggtgacagagcaagact 73
||||||||||| |||||||| |||||||||
Sbjct: 245 gcactccagcctgggtgacaaagcaagact 274
>RF00017;Metazoa_SRP;AANU01176107.1/18-301 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 gggtgacagagcaagactctgt 77
||||||||||||||||||||||
Sbjct: 122 gggtgacagagcaagactctgt 143
>RF00554;SNORA48;CU104675.1/69513-69359 9593:Gorilla gorilla
(Western Gorilla)
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| || ||||||||| |||||||||||
Sbjct: 2 actccagcctggatgacagagccagactctgtct 35
>RF00554;SNORA48;AANU01228109.1/31707-31548 9544:Macaca mulatta
(rhesus monkey)
Length = 160
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 46 actccagcccgggtgacagagcaagactctgtct 79
||||||||| ||| |||||||| |||||||||||
Sbjct: 2 actccagcctgggcgacagagccagactctgtct 35
