miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33416_bta-mir-544b-1:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 cctggaaagcttgttaaaatgcagattc 30
|||||| |||||||||||||||||||||
Sbjct: 4 cctggatagcttgttaaaatgcagattc 31
>27230_eca-mir-544-2:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 20 cttgttaaaaggcagattctgattc 44
>27994_mml-mir-544:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 20 cttgttaaaaagcagattctgattc 44
>28792_hsa-mir-544:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 20 cttgttaaaaagcagattctgattc 44
>30468_ptr-mir-544:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 19 cttgttaaaaagcagattctgattc 43
>31131_ppy-mir-544:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 20 cttgttaaaaagcagattctgattc 44
>33415_bta-mir-544a:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 20 cttgttaaaaggcagattctgattc 44
>33870_oar-mir-544:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 24 cttgttaaaaggcagattctgattc 48
>33871_oar-mir-544:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgattc 36
|||||||||| ||||||||||||||
Sbjct: 24 cttgttaaaaggcagattctgattc 48
>26878_cfa-mir-544:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgatt 35
|||||||||| |||||||||||||
Sbjct: 20 cttgttaaaaggcagattctgatt 43
>32955_rno-mir-544:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 cttgttaaaatgcagattctgatt 35
|||||||||| |||||||||||||
Sbjct: 12 cttgttaaaaagcagattctgatt 35
