miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28968_hsa-mir-650:mirbase
Length = 96
Score = 105 bits (53), Expect = 3e-24
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 68
>30571_ptr-mir-650:mirbase
Length = 95
Score = 97.6 bits (49), Expect = 7e-22
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
|||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 15 aggaggcagcgctctcaggacgtcaccaccatggccagggctctgctcctcct 67
>28078_mml-mir-650a-1:mirbase
Length = 95
Score = 89.7 bits (45), Expect = 2e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 16 aggaggcagcgctctcaggacgtctccaccatggtctgggctctgctcctcct 68
>28079_mml-mir-650a-2:mirbase
Length = 95
Score = 81.8 bits (41), Expect = 4e-17
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
||||||||||||||||||||| || ||||||||| ||||||||||||||||||
Sbjct: 16 aggaggcagcgctctcaggacttctccaccatggtctgggctctgctcctcct 68
>31220_ppy-mir-650:mirbase
Length = 95
Score = 73.8 bits (37), Expect = 1e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
|||||||||| ||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 16 aggaggcagctctctcgggacgtctccaccatggcctggtctctgctcctcct 68
>28080_mml-mir-650b:mirbase
Length = 95
Score = 69.9 bits (35), Expect = 1e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctc 51
|||||||||||||||| |||| || ||||||||||||||| ||||||||||
Sbjct: 16 aggaggcagcgctctcgggacatctccaccatggcctgggatctgctcctc 66
>28082_mml-mir-650d:mirbase
Length = 92
Score = 65.9 bits (33), Expect = 2e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
||||| ||| ||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 16 aggagacagtgctgtcgggacgtctccaccatggcctgggctctgctcctcct 68
>28081_mml-mir-650c:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 9e-12
Identities = 48/53 (90%), Gaps = 4/53 (7%)
Strand = Plus / Plus
Query: 1 aggaggcagcgctctcaggacgtcaccaccatggcctgggctctgctcctcct 53
|||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 16 aggaggcagcgctctcag----tctccaccatggcctgggctctgctcctcct 64
