miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27831_mml-mir-302a:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 7 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 60
Query: 67 tggtgatgg 75
|||||||||
Sbjct: 61 tggtgatgg 69
>28555_hsa-mir-302a:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 7 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 60
Query: 67 tggtgatgg 75
|||||||||
Sbjct: 61 tggtgatgg 69
>30310_ptr-mir-302a:mirbase
Length = 68
Score = 135 bits (68), Expect = 5e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 7 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 60
Query: 67 tggtgatg 74
||||||||
Sbjct: 61 tggtgatg 68
>26790_cfa-mir-302a:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 7 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 66
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 1 ccaccacttaaacgtggatgtacttgctttgaaactcaaaaagtaagtgcttccatgttt 60
Query: 67 tggtgatgg 75
| |||||||
Sbjct: 61 tagtgatgg 69
>27115_eca-mir-302a:mirbase
Length = 68
Score = 111 bits (56), Expect = 7e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 7 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 66
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1 ccaccacttaaacgtggatgtacttgctttgaaactataaaagtaagtgcttccatgttt 60
Query: 67 tggtgatg 74
| ||||||
Sbjct: 61 tagtgatg 68
>33310_bta-mir-302a:mirbase
Length = 70
Score = 99.6 bits (50), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 6 cccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgtt 65
||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 1 cccaccacttaaacgtggatgtacttgctttatagctaaaaaagtaagtgcttccatgtt 60
Query: 66 ttggtgatgg 75
|| |||||||
Sbjct: 61 ttagtgatgg 70
>31982_mmu-mir-302a:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 3e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 7 ccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgttt 66
||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||||
Sbjct: 1 ccaccacttaaacgtggttgtacttgctttagacctaagaaagtaagtgcttccatgttt 60
Query: 67 tggtgatgg 75
|||||||||
Sbjct: 61 tggtgatgg 69
>27438_mdo-mir-302a:mirbase
Length = 70
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 6 cccaccacttaaacgtggatgtacttgctttgaaactaaagaagtaagtgcttccatgtt 65
||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 cccactacttaaacgtggatttacttgctttgtttctaaaaaagtaagtgcttccatgtt 60
Query: 66 ttggtgatgg 75
|| |||||||
Sbjct: 61 ttagtgatgg 70
>31546_oan-mir-302-1:mirbase
Length = 126
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttttggtgatggt 76
||||||||||||||||||||| ||||||||
Sbjct: 75 aagtaagtgcttccatgttttagtgatggt 104
>30928_ppy-mir-302b:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 aaagaagtaagtgcttccatgtttt 67
|||||||||||||||||||||||||
Sbjct: 43 aaagaagtaagtgcttccatgtttt 67
>27439_mdo-mir-302b:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 gtaagtgcttccatgttttggt 70
||||||||||||||||||||||
Sbjct: 44 gtaagtgcttccatgttttggt 65
>26017_gga-mir-302a:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 aagtgcttccatgttttggtgatgg 75
||||||||||||||||| |||||||
Sbjct: 43 aagtgcttccatgttttagtgatgg 67
>26018_gga-mir-302b:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgtttt 67
|||||||||||||||||||||
Sbjct: 43 aagtaagtgcttccatgtttt 63
>26020_gga-mir-302d:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgtttt 67
|||||||||||||||||||||
Sbjct: 41 aagtaagtgcttccatgtttt 61
>27832_mml-mir-302b:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgtttt 67
|||||||||||||||||||||
Sbjct: 47 aagtaagtgcttccatgtttt 67
>28556_hsa-mir-302b:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgtttt 67
|||||||||||||||||||||
Sbjct: 44 aagtaagtgcttccatgtttt 64
>30311_ptr-mir-302b:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgtttt 67
|||||||||||||||||||||
Sbjct: 44 aagtaagtgcttccatgtttt 64
>31547_oan-mir-302-2:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgtttt 67
|||||||||||||||||||||
Sbjct: 39 aagtaagtgcttccatgtttt 59
>26019_gga-mir-302c:mirbase
Length = 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 37 aagtaagtgcttccatgttt 56
>26791_cfa-mir-302b:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 47 agtaagtgcttccatgtttt 66
>26792_cfa-mir-302c:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
>27116_eca-mir-302b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 48 agtaagtgcttccatgtttt 67
>27117_eca-mir-302c:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
>27440_mdo-mir-302c:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 34 aagtaagtgcttccatgttt 53
>27833_mml-mir-302c:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
>28557_hsa-mir-302c:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
>30312_ptr-mir-302c:mirbase
Length = 67
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
>30929_ppy-mir-302c:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
>31983_mmu-mir-302b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 46 agtaagtgcttccatgtttt 65
>33311_bta-mir-302b:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 agtaagtgcttccatgtttt 67
||||||||||||||||||||
Sbjct: 47 agtaagtgcttccatgtttt 66
>33312_bta-mir-302c:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 aagtaagtgcttccatgttt 66
||||||||||||||||||||
Sbjct: 40 aagtaagtgcttccatgttt 59
