miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31354_ppy-mir-1299:mirbase
Length = 83
Score = 101 bits (51), Expect = 1e-22
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 12 cctcatagcagtgttctggaatcctttgtgagggacaaacattcagaccccagcaggagg 71
||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |
Sbjct: 1 cctcatagcagtgttctggaaacctacgtgagggacaaacattcagaccacagcaggtgt 60
Query: 72 gatctggaatcctgtgtgaggga 94
| ||||||||||| |||||||||
Sbjct: 61 gttctggaatcctatgtgaggga 83
>29157_hsa-mir-1299:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 12 cctcatagcagtgttctggaatcctttgtgagggacaaacattcagaccccagcaggagg 71
|||||| |||||||||||||||||| ||||||||||| ||||||||||| | || ||
Sbjct: 1 cctcatggcagtgttctggaatcctacgtgagggacaatcattcagacccacgtagcagt 60
Query: 72 gatctggaatcctgtgtgaggga 94
| |||||||| ||||||||||||
Sbjct: 61 gttctggaattctgtgtgaggga 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 4 attcagaccctcatagcagtgttctggaatcctttgtgaggga 46
|||||||||| | ||||||||||||||||| || |||||||||
Sbjct: 41 attcagacccacgtagcagtgttctggaattctgtgtgaggga 83
>30713_ptr-mir-1299:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 19 gcagtgttctggaatcctttgtgagggacaaacattcagaccccagcaggagggatctgg 78
|||||||||| ||||||| |||||||||| ||||||||||| | || || | |||||
Sbjct: 8 gcagtgttctcgaatcctacatgagggacaatcattcagacccacgtagcagtgttctgg 67
Query: 79 aatcctgtgtgaggg 93
||| |||||||||||
Sbjct: 68 aattctgtgtgaggg 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 4 attcagaccctcatagcagtgttctggaatcctttgtgaggg 45
|||||||||| | ||||||||||||||||| || ||||||||
Sbjct: 41 attcagacccacgtagcagtgttctggaattctgtgtgaggg 82
