miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28904_hsa-mir-589:mirbase
Length = 99
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 gcctgtgcccagcagcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctgtgcccagcagcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 64
Query: 61 aacaaatgccggttcccagacgctgccagctggcc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 65 aacaaatgccggttcccagacgctgccagctggcc 99
>30524_ptr-mir-589:mirbase
Length = 99
Score = 172 bits (87), Expect = 3e-44
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 1 gcctgtgcccagcagcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 gcctgtgcccagcagcccctgagaaccatgtctgctctgagctgggtactgcctgttcag 64
Query: 61 aacaaatgccggttcccagacgctgccagctggcc 95
|||||| ||||||||||||||||||||||||||||
Sbjct: 65 aacaaacgccggttcccagacgctgccagctggcc 99
>28036_mml-mir-589:mirbase
Length = 99
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 gcctgtgcccagcagcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctgtgcccagcagcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 64
Query: 61 aacaaatgccggttcccagacgctgccagctggcc 95
|||| | || | |||||||||||||||||||||||
Sbjct: 65 aacagacgctgcttcccagacgctgccagctggcc 99
>31168_ppy-mir-589:mirbase
Length = 99
Score = 149 bits (75), Expect = 4e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 1 gcctgtgcccagcagcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 60
|||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctgtgctcatcggcccctgagaaccacgtctgctctgagctgggtactgcctgttcag 64
Query: 61 aacaaatgccggttcccagacgctgccagctggcc 95
|||||| || |||||||||||||||||||||||||
Sbjct: 65 aacaaacgctggttcccagacgctgccagctggcc 99
>26886_cfa-mir-589:mirbase
Length = 72
Score = 67.9 bits (34), Expect = 1e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 19 ctgagaaccacgtctgctctgagctgggtactgcctgttcagaaca 64
|||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 5 ctgagaaccatgtctgatcagagctgggtactgcctgttcagaaca 50
