miRNEST 2.0, an integrative microRNA resource :: BLAST
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 87.7 bits (44), Expect = 1e-18
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 ttaggttgctgcgaaagtaattgtggt-tttgccattgaaagtaatcacaaaaaccgtaa 70
|||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||| |
Sbjct: 83 ttaggttggtgcaaaagtaattgtggtgtttgccattgaaagtaatgacaaaaaccgcga 24
Query: 71 ttacttttgcac 82
||||||||||||
Sbjct: 23 ttacttttgcac 12
>28828_hsa-mir-548f-4:mirbase
Length = 105
Score = 73.8 bits (37), Expect = 2e-14
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtttt-gccattgaaagtaatcacaaaaaccgtaa 70
|||||||| ||| |||||||| |||||||| |||||| |||||||| |||||||| ||||
Sbjct: 14 ttaggttggtgcaaaagtaatagtggtttttgccattaaaagtaatgacaaaaactgtaa 73
Query: 71 ttacttttg 79
|||||||||
Sbjct: 74 ttacttttg 82
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 10 atttaggttgctgcgaaagtaattgtgg-ttttgccattgaaagtaatcacaaaaacc 66
|||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 87 atttaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaaacc 30
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 10 atttaggttgctgcgaaagtaattgtgg-ttttgccattgaaagtaatcacaaaaacc 66
|||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 11 atttaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaaacc 68
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 10 atttaggttgctgcgaaagtaattgtgg-ttttgccattgaaagtaatcacaaaaacc 66
|||||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 11 atttaggttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaaacc 68
>30483_ptr-mir-548j:mirbase
Length = 111
Score = 58.0 bits (29), Expect = 1e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
||||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 69 ttttgccattgaaagtaatatcaaagaccgcaattacttttgcac 25
>28002_mml-mir-548f:mirbase
Length = 85
Score = 56.0 bits (28), Expect = 5e-09
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 10 atttaggttgctgcgaaagtaattgtgg-ttttgccattgaaagtaat 56
|||||||||| ||| |||||||||| || |||||||||||||||||||
Sbjct: 1 atttaggttggtgcaaaagtaattgcggattttgccattgaaagtaat 48
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 5e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtttt-gccattgaaagtaatcacaaaaaccgtaa 70
|||||||| ||| |||||||| | |||||| | ||||||||||||| ||||||| | ||
Sbjct: 17 ttaggttggtgcaaaagtaatcgcggtttttgtcattgaaagtaatagcaaaaactgcaa 76
Query: 71 ttacttttgcac 82
||||||||||||
Sbjct: 77 ttacttttgcac 88
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 65 ttttgctactgaaagtaatggcaaaaaccgcaattacttttgcac 21
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 65 ttttgctactgaaagtaatggcaaaaaccgcaattacttttgcac 21
>28831_hsa-mir-548h-1:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||| ||||| |||||||| |||||||||| |||||||||||||
Sbjct: 61 ttttaccattaaaagtaatgacaaaaaccgcgattacttttgcac 17
>28840_hsa-mir-548j:mirbase
Length = 112
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||||| |||||||||| |||| |||| ||||||||||||||
Sbjct: 69 ttttgccactgaaagtaataccaaagaccgcaattacttttgcac 25
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 33 ttttgctactgaaagtaatggcaaaaaccgcaattacttttgcac 77
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 65 ttttgctactgaaagtaatggcaaaaaccgcaattacttttgcac 21
>30476_ptr-mir-548h:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||| ||||| |||||||| |||||||||| |||||||||||||
Sbjct: 61 ttttaccattaaaagtaatgacaaaaaccgcgattacttttgcac 17
>27999_mml-mir-548d:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtt-ttgccattgaaagtaatcacaaaaaccgtaa 70
|||||||| ||| ||||||||||||||| ||||| | |||||||| |||||||| ||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccacaa 72
Query: 71 ttacttttgcac 82
|| |||||||||
Sbjct: 73 tttcttttgcac 84
>28000_mml-mir-548d:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtt-ttgccattgaaagtaatcacaaaaaccgtaa 70
|||||||| ||| ||||||||||||||| ||||| | |||||||| |||||||| ||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaaaccacaa 72
Query: 71 ttacttttgcac 82
|| |||||||||
Sbjct: 73 tttcttttgcac 84
>28830_hsa-mir-548g:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 37 gttttgccattgaaagtaatcacaaaaaccgtaattacttttgcactaatct 88
|||||||||| ||| ||||| ||||||| | ||||||||||||||||||||
Sbjct: 58 gttttgccatagaacgtaatg-caaaaactgcaattacttttgcactaatct 8
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 16 gttgctgcgaaagtaattgtgg-ttttgccattgaaagtaatcacaaaaaccgtaattac 74
|||| ||| ||||||||||||| |||||||||| ||||||| |||||| | ||||||
Sbjct: 16 gttggtgcaaaagtaattgtggtttttgccattaaaagtaacgacaaaactggcaattac 75
Query: 75 ttttgcac 82
||||||||
Sbjct: 76 ttttgcac 83
>28001_mml-mir-548e:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 36 ggttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
||||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 67 ggttttgccattgaaagtaatggtaaaactcgcaattacttttgcac 21
>28797_hsa-mir-548a-3:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 37 gttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 66 gttttgccattgaaagtaatggtaaaactcgcaattacttttgcac 21
>28798_hsa-mir-548a-3:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 37 gttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 66 gttttgccattgaaagtaatggtaaaactcgcaattacttttgcac 21
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 ttaggttgctgcgaaagtaattgtggtttt 41
|||||||| ||| |||||||||||||||||
Sbjct: 85 ttaggttggtgcaaaagtaattgtggtttt 56
>28803_hsa-mir-548ad:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtttt 41
|||||||| ||| |||||||||||||||||
Sbjct: 4 ttaggttggtgcaaaagtaattgtggtttt 33
>28816_hsa-mir-548b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 tatttaggttgctgcgaaagtaattgtggttttg 42
||||||||||| || ||||||||||||||||||
Sbjct: 10 tatttaggttggcgcaaaagtaattgtggttttg 43
>28817_hsa-mir-548b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 9 tatttaggttgctgcgaaagtaattgtggttttg 42
||||||||||| || ||||||||||||||||||
Sbjct: 10 tatttaggttggcgcaaaagtaattgtggttttg 43
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtttt 41
|||||||| ||| |||||||||||||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttt 42
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggtttt 41
|||||||| ||| |||||||||||||||||
Sbjct: 13 ttaggttggtgcaaaagtaattgtggtttt 42
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 49 aaagtaatcacaaaaaccgtaattacttttgcac 82
|||||||| |||||||||| |||||||||||||
Sbjct: 46 aaagtaatgacaaaaaccgcgattacttttgcac 13
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 taatcacaaaaaccgtaattacttttgcac 82
|||| |||||||||| ||||||||||||||
Sbjct: 65 taatgacaaaaaccgcaattacttttgcac 94
>28855_hsa-mir-548x-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 25 aaagtaattgtgg-ttttgccattgaaagtaatcacaaaaaccgtaattacttt 77
||||||||||||| |||||||||| |||||||| |||||| | |||||||||
Sbjct: 24 aaagtaattgtggcttttgccattaaaagtaatggtaaaaactgcaattacttt 77
>27996_mml-mir-548a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 7e-05
Identities = 42/48 (87%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 16 gttgctgcgaaagtaattgtgg--ttttgccattgaaagtaatcacaa 61
|||| ||| ||||||||||||| |||||||||| |||||||| ||||
Sbjct: 17 gttggtgcaaaagtaattgtggttttttgccattaaaagtaatgacaa 64
>28807_hsa-mir-548ag-2:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 7e-05
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 28 gtaattgtggttt-tgccattgaaagtaa 55
||||||||||||| |||||||||||||||
Sbjct: 8 gtaattgtggtttctgccattgaaagtaa 36
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||| ||||| |||||||| ||||||| | ||||||||||||||
Sbjct: 59 ttttaccattaaaagtaatagcaaaaactgcaattacttttgcac 15
>28825_hsa-mir-548f-1:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 46 ttgaaagtaatcacaaaaaccgtaattacttttgcac 82
||||||||||| ||||||| || |||||||||||||
Sbjct: 46 ttgaaagtaatgtcaaaaactgtgattacttttgcac 10
>28827_hsa-mir-548f-3:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 50 aagtaatcacaaaaaccgtaattacttttgcac 82
||||||| ||||||| ||||||||||||||||
Sbjct: 44 aagtaattgcaaaaactgtaattacttttgcac 76
>28829_hsa-mir-548f-5:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtggttttg-ccattgaaagtaatcacaaaaaccgtaa 70
|||||||||||| |||||||| || |||| |||||| ||||||| |||||| ||||
Sbjct: 3 ttaggttgctgcaaaagtaatcatgtttttttccattgtaagtaatgggaaaaactgtaa 62
Query: 71 ttacttttg 79
|||||||||
Sbjct: 63 ttacttttg 71
>28847_hsa-mir-548p:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattactttt 78
|||||| |||||||||||| |||||||| | ||||| ||||
Sbjct: 54 ttttgctattgaaagtaatgacaaaaactgcaattaatttt 14
>28854_hsa-mir-548x:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 45 attgaaagtaatcacaaaaaccgtaattacttttgcactaa 85
||||||||||| | ||||||| | |||||||||||||||||
Sbjct: 43 attgaaagtaa-cgcaaaaactgcaattacttttgcactaa 4
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||||| ||| |||||| ||||||| || |||||||||||||
Sbjct: 63 ttttgccactgagagtaatggcaaaaacagtgattacttttgcac 19
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 caaaaaccgtaattacttttgcac 82
|||||||||| |||||||||||||
Sbjct: 59 caaaaaccgtgattacttttgcac 82
>30471_ptr-mir-548a-2:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
|||||||||| |||||||| |||||| | ||||||||||||||
Sbjct: 39 ttttgccattaaaagtaatgacaaaactggcaattacttttgcac 83
>30475_ptr-mir-548f-2:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 50 aagtaatcacaaaaaccgtaattacttttgcac 82
||||||| ||||||| ||||||||||||||||
Sbjct: 44 aagtaattgcaaaaactgtaattacttttgcac 76
>30487_ptr-mir-548p:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 38 ttttgccattgaaagtaatcacaaaaaccgtaattactttt 78
|||||| |||||||||||| |||||||| | ||||| ||||
Sbjct: 54 ttttgctattgaaagtaatgacaaaaactgcaattaatttt 14
>28795_hsa-mir-548a-1:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 16 gttgctgcgaaagtaattgtg-gttttgccattgaaagtaatcacaaaaaccgtaattac 74
|||| ||| |||||||||||| |||||||||| ||||||| |||||| | ||||||
Sbjct: 17 gttggtgcaaaagtaattgtgatttttgccattaaaagtaacgacaaaactggcaattac 76
Query: 75 ttttgcac 82
||||||||
Sbjct: 77 ttttgcac 84
>28808_hsa-mir-548ah:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 39 tttgccattgaaagtaatcacaaaaaccgtaattacttttgcac 82
||||||| | |||||||| |||||||| | | ||||||||||||
Sbjct: 27 tttgccaataaaagtaatgacaaaaactgcagttacttttgcac 70
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 59 caaaaaccgtaattacttttgcac 82
||||||||| ||||||||||||||
Sbjct: 29 caaaaaccgcaattacttttgcac 6
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 ttaggttgctgcgaaagtaattgtgg-ttttgccattgaaagtaatcacaaaaaccgtaa 70
|||||||| ||| |||| ||||||| ||||||| | |||||||| ||||||||| ||
Sbjct: 3 ttaggttggtgcaaaaggcattgtggtttttgcctataaaagtaatggcaaaaaccgcaa 62
Query: 71 ttacttttgcac 82
|| |||||||||
Sbjct: 63 ttccttttgcac 74
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 caaaaaccgtaattacttttgcac 82
||||||| ||||||||||||||||
Sbjct: 58 caaaaactgtaattacttttgcac 81
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 59 caaaaaccgtaattacttttgcac 82
||||||||| ||||||||||||||
Sbjct: 26 caaaaaccgcaattacttttgcac 3
>28850_hsa-mir-548t:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 14 aggttgctgcgaaagtaattgtggtttt 41
|||||| ||| |||||||||||||||||
Sbjct: 74 aggttggtgcaaaagtaattgtggtttt 47
>30474_ptr-mir-548f-1:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 caaaaaccgtaattacttttgcac 82
||||||| ||||||||||||||||
Sbjct: 47 caaaaactgtaattacttttgcac 70
