miRNEST 2.0, an integrative microRNA resource :: BLAST
>31526_oan-mir-196b:mirbase
Length = 85
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagca 67
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aactggtctgtgatttaggtagtttcctgttgttggggctccacctttctctcgacagca 60
Query: 68 cgacactgccttcattactt 87
||||||||||||||||||||
Sbjct: 61 cgacactgccttcattactt 80
>31917_mmu-mir-196b:mirbase
Length = 85
Score = 143 bits (72), Expect = 3e-35
Identities = 79/80 (98%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagca 67
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagca 59
Query: 68 cgacactgccttcattactt 87
||||||||||||||||||||
Sbjct: 60 cgacactgccttcattactt 79
>32784_rno-mir-196b:mirbase
Length = 85
Score = 143 bits (72), Expect = 3e-35
Identities = 79/80 (98%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagca 67
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagca 59
Query: 68 cgacactgccttcattactt 87
||||||||||||||||||||
Sbjct: 60 cgacactgccttcattactt 79
>33270_bta-mir-196b:mirbase
Length = 85
Score = 143 bits (72), Expect = 3e-35
Identities = 79/80 (98%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagca 67
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagca 59
Query: 68 cgacactgccttcattactt 87
||||||||||||||||||||
Sbjct: 60 cgacactgccttcattactt 79
>28509_hsa-mir-196b:mirbase
Length = 84
Score = 141 bits (71), Expect = 1e-34
Identities = 78/79 (98%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcac 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagcac 59
Query: 69 gacactgccttcattactt 87
|||||||||||||||||||
Sbjct: 60 gacactgccttcattactt 78
>30273_ptr-mir-196b:mirbase
Length = 83
Score = 141 bits (71), Expect = 1e-34
Identities = 78/79 (98%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcac 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagcac 59
Query: 69 gacactgccttcattactt 87
|||||||||||||||||||
Sbjct: 60 gacactgccttcattactt 78
>30889_ppy-mir-196b:mirbase
Length = 84
Score = 141 bits (71), Expect = 1e-34
Identities = 78/79 (98%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcac 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagcac 59
Query: 69 gacactgccttcattactt 87
|||||||||||||||||||
Sbjct: 60 gacactgccttcattactt 78
>34027_ssc-mir-196b:mirbase
Length = 80
Score = 139 bits (70), Expect = 4e-34
Identities = 77/78 (98%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ctggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcacg 69
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagcacg 59
Query: 70 acactgccttcattactt 87
||||||||||||||||||
Sbjct: 60 acactgccttcattactt 77
>34028_ssc-mir-196b:mirbase
Length = 80
Score = 139 bits (70), Expect = 4e-34
Identities = 77/78 (98%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ctggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcacg 69
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagcacg 59
Query: 70 acactgccttcattactt 87
||||||||||||||||||
Sbjct: 60 acactgccttcattactt 77
>27416_mdo-mir-196b:mirbase
Length = 86
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagca 67
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aactggtctgtgatttaggtagtttcctgttgttggggctccacctttctctcgacagca 60
Query: 68 cgacactgccttcattactt 87
||| ||||||||||||||||
Sbjct: 61 cgatactgccttcattactt 80
>27792_mml-mir-196b:mirbase
Length = 75
Score = 135 bits (68), Expect = 7e-33
Identities = 75/76 (98%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcac 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttggg-atccacctttctctcgacagcac 59
Query: 69 gacactgccttcatta 84
||||||||||||||||
Sbjct: 60 gacactgccttcatta 75
>27081_eca-mir-196b:mirbase
Length = 84
Score = 133 bits (67), Expect = 3e-32
Identities = 77/79 (97%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagcac 68
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttggg-atccagctttctctcgacagcac 59
Query: 69 gacactgccttcattactt 87
|||||||||||||||||||
Sbjct: 60 gacactgccttcattactt 78
>26754_cfa-mir-196b:mirbase
Length = 58
Score = 101 bits (51), Expect = 9e-23
Identities = 58/59 (98%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 23 taggtagtttcctgttgttggggatccacctttctctcgacagcacgacactgccttca 81
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggtagtttcctgttgttggg-atccacctttctctcgacagcacgacactgccttca 58
>25986_gga-mir-196-2:mirbase
Length = 94
Score = 97.6 bits (49), Expect = 1e-21
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggggatccacctttctctcgacagca 67
||||| || ||| ||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 1 aactgctctgtggtttaggtagtttcatgttgttggggctccacctttctctctacagca 60
Query: 68 cgacactgccttcattactttcagttganatc 99
||| |||||||| ||||| ||||||||| |||
Sbjct: 61 cgaaactgccttaattac-ttcagttgatatc 91
>25817_xtr-mir-196b:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggggatccacctttctctcgacagcacgacactgccttc 80
|||||||||||| |||||||||| || |||||||||||| ||| || || ||||||||
Sbjct: 14 tttaggtagttttatgttgttgggcattcacctttctctctacaacaagaaactgcctta 73
Query: 81 attac 85
|||||
Sbjct: 74 attac 78
>34622_fru-mir-196a-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggggat 47
||||||||||||| |||||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggggat 40
>34769_tni-mir-196a-1:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggggat 47
||||||||||||| |||||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggggat 40
>25985_gga-mir-196-1:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 7 gaactggtcggtgatttaggtagtttcctgttgttggg 44
|||||| || |||| |||||||||||| ||||||||||
Sbjct: 8 gaactgctctgtgaattaggtagtttcatgttgttggg 45
>34623_fru-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggg 45
||||||||||||| |||||||||||
Sbjct: 9 tttaggtagtttcatgttgttgggg 33
>34770_tni-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggg 45
||||||||||||| |||||||||||
Sbjct: 9 tttaggtagtttcatgttgttgggg 33
>25816_xtr-mir-196a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg 44
||||||||||||| ||||||||||
Sbjct: 23 tttaggtagtttcatgttgttggg 46
>25987_gga-mir-196-3:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg 44
||||||||||||| ||||||||||
Sbjct: 22 tttaggtagtttcatgttgttggg 45
>26752_cfa-mir-196a-1:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 9 gtgaattaggtagtttcatgttgttggg 36
>27080_eca-mir-196a:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgagttaggtagtttcatgttgttggg 28
>27790_mml-mir-196a-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>28323_ggo-mir-196-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>28507_hsa-mir-196a-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>30887_ppy-mir-196-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>33268_bta-mir-196a-1:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 18 gtgaattaggtagtttcatgttgttggg 45
>34347_dre-mir-196a-1:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg 44
||||||||||||| ||||||||||
Sbjct: 19 tttaggtagtttcatgttgttggg 42
>34348_dre-mir-196a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg 44
||||||||||||| ||||||||||
Sbjct: 9 tttaggtagtttcatgttgttggg 32
>34349_dre-mir-196b:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
||||||||||||||||| |||||||||
Sbjct: 5 gtgatttaggtagtttcaagttgttggg 32
>34351_dre-mir-196d:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||||||||||||||| ||||||||||
Sbjct: 2 gtgatttaggtagttttatgttgttggg 29
