miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28990_hsa-mir-675:mirbase
Length = 73
Score = 119 bits (60), Expect = 3e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 7 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 65
>31235_ppy-mir-675a:mirbase
Length = 73
Score = 119 bits (60), Expect = 3e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 7 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 65
>31236_ppy-mir-675b:mirbase
Length = 95
Score = 119 bits (60), Expect = 3e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 7 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 78
>28110_mml-mir-675:mirbase
Length = 73
Score = 111 bits (56), Expect = 7e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 7 ggtctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 ggtctggtgcggagagggcccacagtggacttggtgacactgtatgccctcaccgctcag 65
>32290_mmu-mir-675:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 1e-14
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 10 ctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
|||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 14 ctggtgcggaaagggcccacagtggacttggt-acactgtatgccctaaccgctcag 69
>32291_mmu-mir-675:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 1e-14
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 10 ctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
|||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 14 ctggtgcggaaagggcccacagtggacttggt-acactgtatgccctaaccgctcag 69
>32979_rno-mir-675:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 1e-14
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 10 ctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
|||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 14 ctggtgcggaaagggcccacagtggacttggtg-cactgtatgccctaaccgctcag 69
>27256_eca-mir-675:mirbase
Length = 73
Score = 65.9 bits (33), Expect = 4e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 10 ctggtgcggagagggcccacagtggacttggtgacgctgtatgccctcaccgctcag 66
|||| ||||||||||||||||||| ||| ||||| ||||||||| |||||||||||
Sbjct: 9 ctggcgcggagagggcccacagtgcactcagtgacactgtatgccttcaccgctcag 65
