miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29190_hsa-mir-1908:mirbase
          Length = 80

 Score =  151 bits (76), Expect = 1e-37
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                       
Query: 21  cggggatgccgcggcggggacggcgattggtccgtatgtgtggtgccaccggccgccggc 80
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgggaatgccgcggcggggacggcgattggtccgtatgtgtggtgccaccggccgccggc 60

                               
Query: 81  tccgccccggcccccgcccc 100
           ||||||||||||||||||||
Sbjct: 61  tccgccccggcccccgcccc 80




>31375_ppy-mir-1908:mirbase
          Length = 78

 Score =  131 bits (66), Expect = 1e-31
 Identities = 75/78 (96%)
 Strand = Plus / Plus

                                                                       
Query: 23  gggatgccgcggcggggacggcgattggtccgtatgtgtggtgccaccggccgccggctc 82
           |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1   gggatgccgcggcggggaaggcgattggtccggatgtgtggtaccaccggccgccggctc 60

                             
Query: 83  cgccccggcccccgcccc 100
           ||||||||||||||||||
Sbjct: 61  cgccccggcccccgcccc 78