miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||||||||||
Sbjct: 7 tgcaaaagtaattgcggtttttgc 30
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||||||||||
Sbjct: 22 tgcaaaagtaattgcggtttttgc 45
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||||||||||
Sbjct: 22 tgcaaaagtaattgcggtttttgc 45
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||||||||||
Sbjct: 4 tgcaaaagtaattgcggtttttgc 27
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||||||||||
Sbjct: 76 tgcaaaagtaattgcggtttttgc 53
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||||||||||
Sbjct: 22 tgcaaaagtaattgcggtttttgc 45
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttg 83
|||||||||||||||||||||||
Sbjct: 93 tgcaaaagtaattgcggtttttg 71
>28812_hsa-mir-548ak:mirbase
Length = 57
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttt 81
|||||||||||||||||||||
Sbjct: 56 tgcaaaagtaattgcggtttt 36
>28830_hsa-mir-548g:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgca 85
||||||||||||||| |||||||||
Sbjct: 15 tgcaaaagtaattgcagtttttgca 39
>28002_mml-mir-548f:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 12 tgcaaaagtaattgcggattttgc 35
>28027_mml-mir-579:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 taggtgaatgcaaaagtaattgcggttt 80
||||| |||||||||||||| |||||||
Sbjct: 6 taggttaatgcaaaagtaatcgcggttt 33
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 76 tgcaaaagtaattgtggtttttgc 53
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 76 tgcaaaagtaattgtggtttttgc 53
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||| ||||||||
Sbjct: 16 tgcaaaagtaattgcagtttttgc 39
>28813_hsa-mir-548al:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||| ||||||||
Sbjct: 7 tgcaaaagtaattgctgtttttgc 30
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||| |||||||||||||||
Sbjct: 73 tgcaaaaggaattgcggtttttgc 50
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 22 tgcaaaagtaattgtggtttttgc 45
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 22 tgcaaaagtaattgtggtttttgc 45
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 22 tgcaaaagtaattgtggtttttgc 45
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 22 tgcaaaagtaattgtggtttttgc 45
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||| ||||||||
Sbjct: 87 tgcaaaagtaattgcagtttttgc 64
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 36 tgcaaaagtaattgcggattttgc 59
>28837_hsa-mir-548i-2:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 36 tgcaaaagtaattgcggattttgc 59
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 36 tgcaaaagtaattgcggattttgc 59
>28839_hsa-mir-548i-4:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 8 tgcaaaagtaattgcggattttgc 31
>28844_hsa-mir-548n:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 66 tgcaaaagtaattgcgggttttgc 43
>28848_hsa-mir-548q:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||| |||||||||||
Sbjct: 13 tgcaaaagtaatggcggtttttgc 36
>28852_hsa-mir-548v:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 gcaaaagtaattgcggtttt 81
||||||||||||||||||||
Sbjct: 15 gcaaaagtaattgcggtttt 34
>28853_hsa-mir-548w:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||| ||||||||||||
Sbjct: 7 tgcaaaagtaactgcggtttttgc 30
>28854_hsa-mir-548x:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||| ||||||||
Sbjct: 8 tgcaaaagtaattgcagtttttgc 31
>28893_hsa-mir-579:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 taggtgaatgcaaaagtaattgcggttt 80
||||| |||||||||||||| |||||||
Sbjct: 6 taggttaatgcaaaagtaatcgcggttt 33
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
|||||||||||||| |||||||||
Sbjct: 21 tgcaaaagtaattgtggtttttgc 44
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 36 tgcaaaagtaattgcggattttgc 59
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 36 tgcaaaagtaattgcggattttgc 59
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 35 tgcaaaagtaattgcggattttgc 58
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 36 tgcaaaagtaattgcggattttgc 59
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 35 tgcaaaagtaattgcggattttgc 58
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tgcaaaagtaattgcggtttttgc 84
||||||||||||||||| ||||||
Sbjct: 35 tgcaaaagtaattgcggattttgc 58
>30515_ptr-mir-579:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 taggtgaatgcaaaagtaattgcggttt 80
||||| |||||||||||||| |||||||
Sbjct: 5 taggttaatgcaaaagtaatcgcggttt 32
>31158_ppy-mir-579:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 taggtgaatgcaaaagtaattgcggttt 80
||||| |||||||||||||| |||||||
Sbjct: 6 taggttaatgcaaaagtaatcgcggttt 33
