miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 81.8 bits (41), Expect = 8e-17
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgc 66
|||||| |||||||||||||||||| | || |||| ||||||||||||||| ||||||||
Sbjct: 94 tattaagttggtgcaaaagtaattgagatttttgctactgaaagtaatggcaaaaaccgc 35
Query: 67 gatgacttttgcaccagtctaatag 91
|| |||||||||||| |||||||
Sbjct: 34 aattacttttgcaccaacctaatag 10
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tctattaaattggtgcaaaagtaattgcggttgttgcca 44
||||||| ||||||||||||||||||||||| ||||||
Sbjct: 9 tctattaggttggtgcaaaagtaattgcggtttttgcca 47
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 81.8 bits (41), Expect = 8e-17
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgc 66
|||||| |||||||||||||||||| | || |||| ||||||||||||||| ||||||||
Sbjct: 94 tattaagttggtgcaaaagtaattgagatttttgctactgaaagtaatggcaaaaaccgc 35
Query: 67 gatgacttttgcaccagtctaatag 91
|| |||||||||||| |||||||
Sbjct: 34 aattacttttgcaccaacctaatag 10
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tctattaaattggtgcaaaagtaattgcggttgttgcca 44
||||||| ||||||||||||||||||||||| ||||||
Sbjct: 9 tctattaggttggtgcaaaagtaattgcggtttttgcca 47
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 81.8 bits (41), Expect = 8e-17
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgc 66
|||||| |||||||||||||||||| | || |||| ||||||||||||||| ||||||||
Sbjct: 4 tattaagttggtgcaaaagtaattgagatttttgctactgaaagtaatggcaaaaaccgc 63
Query: 67 gatgacttttgcaccagtctaatag 91
|| |||||||||||| |||||||
Sbjct: 64 aattacttttgcaccaacctaatag 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 6 tctattaaattggtgcaaaagtaattgcggttgttgcca 44
||||||| ||||||||||||||||||||||| ||||||
Sbjct: 89 tctattaggttggtgcaaaagtaattgcggtttttgcca 51
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 81.8 bits (41), Expect = 8e-17
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgc 66
|||||| |||||||||||||||||| | || |||| ||||||||||||||| ||||||||
Sbjct: 94 tattaagttggtgcaaaagtaattgagatttttgctactgaaagtaatggcaaaaaccgc 35
Query: 67 gatgacttttgcaccagtctaatag 91
|| |||||||||||| |||||||
Sbjct: 34 aattacttttgcaccaacctaatag 10
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 tctattaaattggtgcaaaagtaattgcggttgttgcca 44
||||||| ||||||||||||||||||||||| ||||||
Sbjct: 9 tctattaggttggtgcaaaagtaattgcggtttttgcca 47
>28832_hsa-mir-548h-2:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgcgatgact 73
|||||||||||||||||| ||| |||||| ||||||||||| | ||||||||||| |||
Sbjct: 78 ttggtgcaaaagtaattgtggtgtttgccattgaaagtaatgacaaaaaccgcgattact 19
Query: 74 tttgcacca 82
|||||||||
Sbjct: 18 tttgcacca 10
>28800_hsa-mir-548aa-2:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 8e-14
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| |||||| |||||||||||||||||
Sbjct: 80 ttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaa 33
>28822_hsa-mir-548d-2:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 8e-14
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| |||||| |||||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaa 65
>28823_hsa-mir-548d-2:mirbase
Length = 97
Score = 71.9 bits (36), Expect = 8e-14
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| |||||| |||||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgtggtttttgccattgaaagtaatggcaaaa 65
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgcgatgact 73
|||||||||||||||| ||||| |||||||||| ||||||||| ||||| | ||| |||
Sbjct: 85 ttggtgcaaaagtaatcacggtttttgccactgagagtaatggcaaaaacagtgattact 26
Query: 74 tttgcaccagtctaatag 91
||||||||| |||||||
Sbjct: 25 tttgcaccaacctaatag 8
>28002_mml-mir-548f:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggc 58
||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 8 ttggtgcaaaagtaattgcggattttgccattgaaagtaatggc 51
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 32 ttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 79
>28837_hsa-mir-548i-2:mirbase
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 32 ttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 79
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 31 ttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 78
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 32 ttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 79
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 31 ttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 78
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 31 ttggtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 78
>28001_mml-mir-548e:mirbase
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaac-cgcgatgact 73
||||||||||||||| ||| | | |||||| |||||||||||| ||||| ||| || |||
Sbjct: 87 ttggtgcaaaagtaactgccggttttgccattgaaagtaatggtaaaactcgcaattact 28
Query: 74 tttgcacca 82
|||||||||
Sbjct: 27 tttgcacca 19
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcg 34
||||||||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgcg 37
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 1e-09
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgcgatgact 73
|||||||||||||||| |||||| ||| || |||||||||| || ||||| || || |||
Sbjct: 22 ttggtgcaaaagtaatcgcggtttttgtcattgaaagtaatagcaaaaactgcaattact 81
Query: 74 tttgcacca 82
|||||||||
Sbjct: 82 tttgcacca 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 59 aaaaccgcgatgacttttgcacca 82
||||||||||| ||||||||||||
Sbjct: 46 aaaaccgcgattacttttgcacca 23
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgc 42
||||||||||||||||||| ||| ||||
Sbjct: 91 ttggtgcaaaagtaattgcagtttttgc 64
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 58.0 bits (29), Expect = 1e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 18 gtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| | |||||| | |||||||||||||||
Sbjct: 35 gtgcaaaagtaattgcggattttgccattaaaagtaatggcaaaa 79
>28840_hsa-mir-548j:mirbase
Length = 112
Score = 58.0 bits (29), Expect = 1e-09
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 16 tggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaa-accgcgatgactt 74
||||||||||||||| || ||| ||||||||||||||||| |||| ||||| || ||||
Sbjct: 89 tggtgcaaaagtaat-gcagtttttgccactgaaagtaataccaaagaccgcaattactt 31
Query: 75 ttgcaccag 83
|||||||||
Sbjct: 30 ttgcaccag 22
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tggtgcaaaagtaattgcggt 36
|||||||||||||||||||||
Sbjct: 23 tggtgcaaaagtaattgcggt 43
>28846_hsa-mir-548o-2:mirbase
Length = 70
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 16 tggtgcaaaagtaattgcggttgttgccactgaaagtaatg 56
|||||||||||||||||||||| |||||| | |||||||||
Sbjct: 1 tggtgcaaaagtaattgcggtttttgccattaaaagtaatg 41
>27999_mml-mir-548d:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| ||||| | |||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaa 65
>28000_mml-mir-548d:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| ||||| | |||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgtggttcttgcctataaaagtaatggcaaaa 65
>28797_hsa-mir-548a-3:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaac-cgcgatgact 73
||||||||||||||||||| | |||||| |||||||||||| ||||| ||| || |||
Sbjct: 87 ttggtgcaaaagtaattgccagttttgccattgaaagtaatggtaaaactcgcaattact 28
Query: 74 tttgcacc 81
||||||||
Sbjct: 27 tttgcacc 20
>28798_hsa-mir-548a-3:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaac-cgcgatgact 73
||||||||||||||||||| | |||||| |||||||||||| ||||| ||| || |||
Sbjct: 87 ttggtgcaaaagtaattgccagttttgccattgaaagtaatggtaaaactcgcaattact 28
Query: 74 tttgcacc 81
||||||||
Sbjct: 27 tttgcacc 20
>28799_hsa-mir-548aa-1:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| ||||| | |||||||||||||||
Sbjct: 80 ttggtgcaaaagtaattgtggtttttgcctgtaaaagtaatggcaaaa 33
>28814_hsa-mir-548am:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||||| ||||| |||| |||||||||||
Sbjct: 3 ttggtgcaaaagtaattgcggtttttgccgtcgaaaataatggcaaaa 50
>28820_hsa-mir-548d-1:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| ||||| | |||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgtggtttttgcctgtaaaagtaatggcaaaa 65
>28821_hsa-mir-548d-1:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||||| |||| ||||| | |||||||||||||||
Sbjct: 18 ttggtgcaaaagtaattgtggtttttgcctgtaaaagtaatggcaaaa 65
>30470_ptr-mir-548a-1:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 5e-09
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaac 63
|||||| |||||||||||||||||| |||| |||||| | ||||||| | ||||||
Sbjct: 10 tattaagttggtgcaaaagtaattgtggtttttgccattaaaagtaacgacaaaac 65
>30474_ptr-mir-548f-1:mirbase
Length = 81
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||| | ||| |||||| ||||||||||||||||
Sbjct: 73 ttggtgcaaaagtaattacagtttttgccatagaaagtaatggcaaaa 26
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | || ||||||||||||
Sbjct: 32 ttggtgcaaaagtaattgcggattttgccattaaacgtaatggcaaaa 79
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||||||||||| | |||||| | ||||||| |||||||
Sbjct: 32 ttggtgcaaaagtaattgcggattttgccattaaaagtaacggcaaaa 79
>28847_hsa-mir-548p:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||| |||||||||||||||| ||| ||| |||| | ||||||||||| |||||
Sbjct: 83 tattacattggtgcaaaagtaactgcagtttttgctattgaaagtaatgacaaaa 29
>30487_ptr-mir-548p:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||| |||||||||||||||| ||| ||| |||| | ||||||||||| |||||
Sbjct: 83 tattacattggtgcaaaagtaactgcagtttttgctattgaaagtaatgacaaaa 29
>28831_hsa-mir-548h-1:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 18 gtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa-ccgcgatgactttt 76
|||||||||||||| | ||| || ||| | ||||||||| ||||| ||||||| ||||||
Sbjct: 80 gtgcaaaagtaattccagtttttaccattaaaagtaatgacaaaaaccgcgattactttt 21
Query: 77 gcacc 81
|||||
Sbjct: 20 gcacc 16
>30476_ptr-mir-548h:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 18 gtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa-ccgcgatgactttt 76
|||||||||||||| | ||| || ||| | ||||||||| ||||| ||||||| ||||||
Sbjct: 80 gtgcaaaagtaattccagtttttaccattaaaagtaatgacaaaaaccgcgattactttt 21
Query: 77 gcacc 81
|||||
Sbjct: 20 gcacc 16
>30483_ptr-mir-548j:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 16 tggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaa-accgcgatgactt 74
|||||||||||||| ||| ||| |||||| |||||||||| |||| ||||| || ||||
Sbjct: 89 tggtgcaaaagtaa-tgcagtttttgccattgaaagtaatatcaaagaccgcaattactt 31
Query: 75 ttgcaccag 83
|||||||||
Sbjct: 30 ttgcaccag 22
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 tggtgcaaaagtaattgcggt 36
|||||||||||||||||||||
Sbjct: 23 tggtgcaaaagtaattgcggt 43
>28795_hsa-mir-548a-1:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 8 tattaaattggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaac 63
|||||| |||||||||||||||||| | || |||||| | ||||||| | ||||||
Sbjct: 11 tattaagttggtgcaaaagtaattgtgatttttgccattaaaagtaacgacaaaac 66
>28828_hsa-mir-548f-4:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||||| | |||| |||||| | ||||||||| |||||
Sbjct: 19 ttggtgcaaaagtaatagtggtttttgccattaaaagtaatgacaaaa 66
>28848_hsa-mir-548q:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 48 aaagtaatggcaaaa-ccgcgatgacttttgcaccagtctaata 90
||||||||||||||| |||| || ||||||||||||| ||||||
Sbjct: 45 aaagtaatggcaaaaaccgccattacttttgcaccagcctaata 2
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 16 tggtgcaaaagtaattgcggttgttgcca 44
||||||||||||||| |||||| ||||||
Sbjct: 10 tggtgcaaaagtaatggcggtttttgcca 38
>30485_ptr-mir-548l:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||| |||||| | ||| || ||||||||||||||||
Sbjct: 8 ttggtgcaaaagtatttgcgggttttgtcatagaaagtaatggcaaaa 55
>28813_hsa-mir-548al:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 17 ggtgcaaaagtaattgcggttgttgccactgaaagtaatggca 59
||||||||||||||||| ||| |||||| | ||| ||||||||
Sbjct: 5 ggtgcaaaagtaattgctgtttttgccattaaaaataatggca 47
Score = 40.1 bits (20), Expect = 3e-04
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 48 aaagtaatggc-aaaaccgcgatgacttttgcaccagtctaata 90
||||||||||| ||||| || |||||||||| |||| |||||||
Sbjct: 51 aaagtaatggcaaaaacggcaatgacttttgtaccaatctaata 94
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggtt 37
|||||||||||||||||||||||
Sbjct: 97 ttggtgcaaaagtaattgcggtt 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 59 aaaaccgcgatgacttttgcaccagtctaatagc 92
||||||||||| |||||||||||| ||||||||
Sbjct: 34 aaaaccgcgattacttttgcaccaacctaatagc 1
>27996_mml-mir-548a:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 tattaaattggtgcaaaagtaattgcggtt 37
|||||| |||||||||||||||||| ||||
Sbjct: 11 tattaagttggtgcaaaagtaattgtggtt 40
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgcca 44
|||||||||||| |||||||||| ||||||
Sbjct: 77 ttggtgcaaaaggaattgcggtttttgcca 48
Score = 42.1 bits (21), Expect = 7e-05
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgcgatgact 73
|||||||||||| |||| |||| ||||| | ||||||||||| |||||||| || ||
Sbjct: 8 ttggtgcaaaaggcattgtggtttttgcctataaaagtaatggcaaaaaccgcaattcct 67
Query: 74 tttgcacca 82
|||||||||
Sbjct: 68 tttgcacca 76
>28826_hsa-mir-548f-2:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatg 56
||||||||||||||||| | ||| |||||| | |||||||||
Sbjct: 84 ttggtgcaaaagtaattacagtttttgccattaaaagtaatg 43
>28839_hsa-mir-548i-4:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgcca 44
||||||||||||||||||||| | ||||||
Sbjct: 4 ttggtgcaaaagtaattgcggattttgcca 33
>28853_hsa-mir-548w:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaacc 64
||||||||||||||| ||||||| ||||| | || |||||||||||||
Sbjct: 3 ttggtgcaaaagtaactgcggtttttgcctttcaacataatggcaaaacc 52
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggc-aaaaccgcgatgact 73
|||||| |||||||||||| ||| || ||| | |||||||| || ||||| || || |||
Sbjct: 81 ttggtgtaaaagtaattgcagtttttaccattaaaagtaatagcaaaaactgcaattact 22
Query: 74 tttgcacca 82
|||||||||
Sbjct: 21 tttgcacca 13
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgc 42
||||||||||||||||||| ||| ||||
Sbjct: 12 ttggtgcaaaagtaattgcagtttttgc 39
>28844_hsa-mir-548n:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 ttggtgcaaaagtaattgcgg 35
|||||||||||||||||||||
Sbjct: 70 ttggtgcaaaagtaattgcgg 50
>28808_hsa-mir-548ah:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
||||||||||||| ||||| || |||||| | ||||||||| |||||
Sbjct: 4 ttggtgcaaaagtgattgcagtgtttgccaataaaagtaatgacaaaa 51
>28842_hsa-mir-548l:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 15 ttggtgcaaaagtaattgcggttgttgccactgaaagtaatggcaaaa 62
|||||||||||||| |||||| | ||| | ||||||||||||||||
Sbjct: 8 ttggtgcaaaagtatttgcgggttttgtcgtagaaagtaatggcaaaa 55
