miRNEST 2.0, an integrative microRNA resource :: BLAST
>28584_hsa-mir-335:mirbase
Length = 94
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 7 tgttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcatt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcatt 60
Query: 67 attgctcctgacctcctctcatttgctatat 97
|||||||||||||||||||||||||||||||
Sbjct: 61 attgctcctgacctcctctcatttgctatat 91
>30332_ptr-mir-335:mirbase
Length = 93
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 8 gttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcatta 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcatta 60
Query: 68 ttgctcctgacctcctctcatttgctatat 97
||||||||||||||||||||||||||||||
Sbjct: 61 ttgctcctgacctcctctcatttgctatat 90
>30952_ppy-mir-335:mirbase
Length = 92
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 9 ttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 60
Query: 69 tgctcctgacctcctctcatttgctatat 97
|||||||||||||||||||||||||||||
Sbjct: 61 tgctcctgacctcctctcatttgctatat 89
>27847_mml-mir-335:mirbase
Length = 88
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 13 gagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgct 60
Query: 73 cctgacctcctctcatttgctatat 97
|||||||||||||||||||||||||
Sbjct: 61 cctgacctcctctcatttgctatat 85
>33325_bta-mir-335:mirbase
Length = 92
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 9 ttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 68
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 60
Query: 69 tgctcctgacctcctctcatttgct 93
|||||||||||||||||||||||||
Sbjct: 61 tgctcctgacctcctctcatttgct 85
>27128_eca-mir-335:mirbase
Length = 75
Score = 149 bits (75), Expect = 4e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 13 gagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgct 60
Query: 73 cctgacctcctctca 87
|||||||||||||||
Sbjct: 61 cctgacctcctctca 75
>34060_ssc-mir-335:mirbase
Length = 80
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 9 ttttgagcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 68
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattat 61
Query: 69 tgctcctgacctcctctca 87
|||||||||||||||||||
Sbjct: 62 tgctcctgacctcctctca 80
>32853_rno-mir-335:mirbase
Length = 98
Score = 125 bits (63), Expect = 6e-30
Identities = 85/92 (92%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 9 ttttgagcgggggtcaagagcaataacgaaaaatgtttgt----cataaaccgtttttca 64
||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 3 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 62
Query: 65 ttattgctcctgacctcctctcatttgctata 96
||||||||||||||||||||||||||| ||||
Sbjct: 63 ttattgctcctgacctcctctcatttgttata 94
>26804_cfa-mir-335:mirbase
Length = 58
Score = 115 bits (58), Expect = 6e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 22 tcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgctcctgacc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaagagcaataacgaaaaatgtttgtcataaaccgtttttcattattgctcctgacc 58
>32000_mmu-mir-335:mirbase
Length = 98
Score = 109 bits (55), Expect = 4e-25
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 9 ttttgagcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttca 64
||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 3 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 62
Query: 65 ttattgctcctgacctcctctcat 88
||||||||||||||| ||||||||
Sbjct: 63 ttattgctcctgaccccctctcat 86
>32001_mmu-mir-335:mirbase
Length = 98
Score = 109 bits (55), Expect = 4e-25
Identities = 77/84 (91%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 9 ttttgagcgggggtcaagagcaataacgaaaaatgtttg----tcataaaccgtttttca 64
||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 3 ttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgtttttca 62
Query: 65 ttattgctcctgacctcctctcat 88
||||||||||||||| ||||||||
Sbjct: 63 ttattgctcctgaccccctctcat 86
