miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40788_mtr-MIR2587c:mirbase
Length = 110
Score = 174 bits (88), Expect = 2e-44
Identities = 100/104 (96%)
Strand = Plus / Plus
Query: 42 cgatggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgta 101
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1 cgatggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcatttta 60
Query: 102 gcttgtgtggggttcatataacggtcaacagagacccttgacat 145
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 acttgtgtggggttcatataacggtcaatagagacccttgacat 104
>40786_mtr-MIR2587a:mirbase
Length = 110
Score = 174 bits (88), Expect = 2e-44
Identities = 100/104 (96%)
Strand = Plus / Plus
Query: 42 cgatggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgta 101
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1 cgatggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcatttta 60
Query: 102 gcttgtgtggggttcatataacggtcaacagagacccttgacat 145
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 acttgtgtggggttcatataacggtcaatagagacccttgacat 104
>40791_mtr-MIR2587f:mirbase
Length = 105
Score = 129 bits (65), Expect = 8e-31
Identities = 92/101 (91%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 45 tggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagct 104
|||||||||||||||||||||||||||||| |||||||||||| |||||| ||||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaat-----agcattgcagct 58
Query: 105 tgtgtggggttcatataacggtcaacagagacccttgacat 145
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 59 tgtgtggggttcatataacggtcaacagagactcttgacat 99
>40790_mtr-MIR2587e:mirbase
Length = 105
Score = 129 bits (65), Expect = 8e-31
Identities = 92/101 (91%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 45 tggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagct 104
|||||||||||||||||||||||||||||| |||||||||||| |||||| ||||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaat-----agcattgcagct 58
Query: 105 tgtgtggggttcatataacggtcaacagagacccttgacat 145
||||||||||||||||||||||||||||||||| |||||||
Sbjct: 59 tgtgtggggttcatataacggtcaacagagaccattgacat 99
>40789_mtr-MIR2587d:mirbase
Length = 115
Score = 121 bits (61), Expect = 2e-28
Identities = 91/101 (90%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 45 tggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagct 104
|||||||||||||||||||||||||||||| |||||||||||| |||||| ||||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaat-----agcattgcagct 58
Query: 105 tgtgtggggttcatataacggtcaacagagacccttgacat 145
||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 59 tgtgtggggttcatataacggtcaacatagaccattgacat 99
>40787_mtr-MIR2587b:mirbase
Length = 98
Score = 109 bits (55), Expect = 8e-25
Identities = 90/100 (90%), Gaps = 5/100 (5%)
Strand = Plus / Plus
Query: 46 ggtgtcatggtcattgttgaccgttcataggaaccctgcaattgcaatgcattgtagctt 105
||||||||||||||||||||||||||||| |||||||||||| || ||||| | |||
Sbjct: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaat---aa--cattgcaactt 56
Query: 106 gtgtggggttcatataacggtcaacagagacccttgacat 145
||||||||||||||||||||||||| |||||| |||||||
Sbjct: 57 gtgtggggttcatataacggtcaactgagacctttgacat 96
