miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>50427_osa-miRf11212-akr:pmrd
          Length = 152

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 250 tttatttagggacggagggagtat 273
           ||||||||||||||||||||||||
Sbjct: 34  tttatttagggacggagggagtat 11



 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atactccctccgtccctaaataaa 34
          ||||||||||||||||||||||||
Sbjct: 11 atactccctccgtccctaaataaa 34



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtccctaaata 32
           ||||||||||||||||||||||
Sbjct: 142 atactccctccgtccctaaata 121



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 252 tatttagggacggagggagtat 273
           ||||||||||||||||||||||
Sbjct: 121 tatttagggacggagggagtat 142




>49712_osa-miRf10497-akr:pmrd
          Length = 172

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 252 tatttagggacggagggagtat 273
           ||||||||||||||||||||||
Sbjct: 22  tatttagggacggagggagtat 1



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtccctaaata 32
          ||||||||||||||||||||||
Sbjct: 1  atactccctccgtccctaaata 22




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 252 tatttagggacggagggagta 272
           |||||||||||||||||||||
Sbjct: 25  tatttagggacggagggagta 5



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tactccctccgtccctaaata 32
          |||||||||||||||||||||
Sbjct: 5  tactccctccgtccctaaata 25



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  tactccctccgtccctaaata 32
           |||||||||||||||||||||
Sbjct: 113 tactccctccgtccctaaata 93



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 252 tatttagggacggagggagta 272
           |||||||||||||||||||||
Sbjct: 93  tatttagggacggagggagta 113




>50827_osa-miRf11612-akr:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 252 tatttagggacggagggagta 272
           |||||||||||||||||||||
Sbjct: 21  tatttagggacggagggagta 1



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tactccctccgtccctaaata 32
          |||||||||||||||||||||
Sbjct: 1  tactccctccgtccctaaata 21



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  tactccctccgtccctaaata 32
           |||||||||||||||||||||
Sbjct: 126 tactccctccgtccctaaata 106



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 252 tatttagggacggagggagta 272
           |||||||||||||||||||||
Sbjct: 106 tatttagggacggagggagta 126




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 252 tatttagggacggagggagta 272
           |||||||||||||||||||||
Sbjct: 27  tatttagggacggagggagta 7



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tactccctccgtccctaaata 32
          |||||||||||||||||||||
Sbjct: 7  tactccctccgtccctaaata 27




>49433_osa-miRf10218-akr:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 gggacggagggagtatgtttt 278
           |||||||||||||||||||||
Sbjct: 69  gggacggagggagtatgtttt 89




>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 246 gtcatttatttagggacggagggagtatg 274
           |||| |||||| |||||||||||||||||
Sbjct: 54  gtcacttattttgggacggagggagtatg 82



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 11 atactccctccgtccctaaataaatgac 38
          |||||||||||||||| |||||| ||||
Sbjct: 81 atactccctccgtcccaaaataagtgac 54




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 249 atttatttagggacggagggagta 272
           |||||||| |||||||||||||||
Sbjct: 34  atttattttgggacggagggagta 11



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtccctaaataaat 35
          ||||||||||||||| ||||||||
Sbjct: 11 tactccctccgtcccaaaataaat 34




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 249 atttatttagggacggagggagta 272
           |||||||| |||||||||||||||
Sbjct: 34  atttattttgggacggagggagta 11



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtccctaaataaat 35
          ||||||||||||||| ||||||||
Sbjct: 11 tactccctccgtcccaaaataaat 34




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 atactccctccgtccctaaataaa 34
          |||||||||||||||| |||||||
Sbjct: 92 atactccctccgtcccaaaataaa 69



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 250 tttatttagggacggagggagtat 273
           ||||||| ||||||||||||||||
Sbjct: 69  tttattttgggacggagggagtat 92




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  atactccctccgtccctaaataaa 34
           |||||||||||||||| |||||||
Sbjct: 123 atactccctccgtcccaaaataaa 100



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 250 tttatttagggacggagggagtat 273
           ||||||| ||||||||||||||||
Sbjct: 100 tttattttgggacggagggagtat 123




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 atactccctccgtccctaaataaa 34
          |||||||||||||||| |||||||
Sbjct: 88 atactccctccgtcccaaaataaa 65



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 250 tttatttagggacggagggagtat 273
           ||||||| ||||||||||||||||
Sbjct: 65  tttattttgggacggagggagtat 88