miRNEST 2.0, an integrative microRNA resource :: BLAST
>45238_miR444:micropc
Length = 108
Score = 206 bits (104), Expect = 3e-54
Identities = 107/108 (99%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 108 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaatgatcggtatggttcaaa 49
Query: 72 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 119
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 1
>45131_miR444:micropc
Length = 108
Score = 200 bits (101), Expect = 2e-52
Identities = 106/108 (98%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 108 ggcagcaagcttgagacaacaactgcacaacntgcaagaaaattatcggtatggttcgaa 49
Query: 72 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 119
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 1
>46185_miR444:micropc
Length = 108
Score = 198 bits (100), Expect = 7e-52
Identities = 106/108 (98%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 108 ggcagcaagcttgagacagcaactgcacaacttgcaagaaaattatcggtatggttcgaa 49
Query: 72 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 119
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 76 aattttcttgcaagatatgcagttgctgcctctagcttg 114
|||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 65 aattttcttgcaagttgtgcagttgctgtctcaagcttg 103
>44872_miR444:micropc
Length = 106
Score = 194 bits (98), Expect = 1e-50
Identities = 104/106 (98%)
Strand = Plus / Minus
Query: 13 gcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaa 72
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 106 gcagcaagcttgagacagcaactgcacaacttgcaagaaaattatcggtatggttcgaaa 47
Query: 73 accaattttcttgcaagatatgcagttgctgcctctagcttgtcac 118
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 accaattttcttgcaagatatgcagttgctgcctctagcttgtcac 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 76 aattttcttgcaagatatgcagttgctgcctctagcttg 114
|||||||||||||| | ||||||||||| ||| ||||||
Sbjct: 64 aattttcttgcaagttgtgcagttgctgtctcaagcttg 102
>45024_miR444:micropc
Length = 96
Score = 190 bits (96), Expect = 2e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 60
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagatatgcagttgctgcctctagctt 96
>45135_miR444:micropc
Length = 96
Score = 182 bits (92), Expect = 4e-47
Identities = 95/96 (98%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaaaatgatcggtatggttcaaaaaccaa 37
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaagatatgcagttgctgcctctagctt 1
>45525_miR444:micropc
Length = 94
Score = 178 bits (90), Expect = 7e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 19 agcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaat 78
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 agcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcgaaaaccaat 60
Query: 79 tttcttgcaagatatgcagttgctgcctctagct 112
||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcttgcaagatatgcagttgctgcctctagct 94
>45230_miR444:micropc
Length = 96
Score = 176 bits (89), Expect = 3e-45
Identities = 94/96 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 96 aagcttgagacaacaactgcacaacntgcaagaaaattatcggtatggttcgaaaaccaa 37
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaagatatgcagttgctgcctctagctt 1
>45562_miR444:micropc
Length = 96
Score = 174 bits (88), Expect = 1e-44
Identities = 94/96 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 96 aagcttgagacagcaactgcacaacttgcaagaaaattatcggtatggttcgaaaaccaa 37
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaagatatgcagttgctgcctctagctt 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 aattttcttgcaagatatgcagttgctgcctctagctt 113
|||||||||||||| | ||||||||||| ||| |||||
Sbjct: 59 aattttcttgcaagttgtgcagttgctgtctcaagctt 96
>46476_miR444:micropc
Length = 96
Score = 159 bits (80), Expect = 6e-40
Identities = 92/96 (95%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggtttgaaacccaa 37
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||| ||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaatatatgcagttgctgcctctagctt 1
>45734_miR444:micropc
Length = 96
Score = 159 bits (80), Expect = 6e-40
Identities = 92/96 (95%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggtttgaaacccaa 37
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||| ||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaatatatgcagttgctgcctctagctt 1
>45697_miR444:micropc
Length = 96
Score = 159 bits (80), Expect = 6e-40
Identities = 92/96 (95%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 96 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggtttgaaacccaa 37
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||| ||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaatatatgcagttgctgcctctagctt 1
>45828_miR444:micropc
Length = 114
Score = 123 bits (62), Expect = 3e-29
Identities = 102/114 (89%), Gaps = 6/114 (5%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggt-tcaa 70
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||
Sbjct: 114 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcggtatggtctgaa 55
Query: 71 aaacc-----aattttcttgcaagatatgcagttgctgcctctagcttgtcacc 119
||||| ||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 54 aaaccctaaagattttcttgcaagatgtgcagttgctgccacaagcttgtcacc 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaaat 54
|||||||| | || |||||||||| |||||||||||||
Sbjct: 6 caagcttgtggcagcaactgcacatcttgcaagaaaat 43
>45451_miR444:micropc
Length = 110
Score = 115 bits (58), Expect = 8e-27
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 110 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcggtacgtcaacaa 51
Query: 72 aaccaa--ttttcttgcaagatatgcagttgctgcctctagcttg 114
|||| | |||||||||||| ||||||||||||||||||||||||
Sbjct: 50 aaccgattttttcttgcaaggtatgcagttgctgcctctagcttg 6
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaa 53
||||||||||| ||| || |||||||| | ||||||||||||
Sbjct: 1 ggcagcaagctagaggcagcaactgcataccttgcaagaaaa 42
>45168_miR444:micropc
Length = 110
Score = 115 bits (58), Expect = 8e-27
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 110 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcggtacgtcaacaa 51
Query: 72 aaccaa--ttttcttgcaagatatgcagttgctgcctctagcttg 114
|||| | |||||||||||| ||||||||||||||||||||||||
Sbjct: 50 aaccgattttttcttgcaaggtatgcagttgctgcctctagcttg 6
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaa 53
||||||||||| ||| || |||||||| | ||||||||||||
Sbjct: 1 ggcagcaagctagaggcagcaactgcataccttgcaagaaaa 42
>45175_miR444:micropc
Length = 98
Score = 101 bits (51), Expect = 1e-22
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaaaaccaa 77
||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |
Sbjct: 1 aagcttgagacaacaactgcacaacttgcaagaaaatcatcggtacgtcaacaaaaccga 60
Query: 78 --ttttcttgcaagatatgcagttgctgcctctagctt 113
|||||||||||| |||||||||||||||||||||||
Sbjct: 61 ttttttcttgcaaggtatgcagttgctgcctctagctt 98
>46210_miR444:micropc
Length = 102
Score = 99.6 bits (50), Expect = 5e-22
Identities = 84/94 (89%), Gaps = 6/94 (6%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggt-tcaaaaacc- 75
||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 102 aagcttgagacaacaactgcacaacttgcaagaaaatcatcggtatggtctgaaaaaccc 43
Query: 76 ----aattttcttgcaagatatgcagttgctgcc 105
||||||||||||||| |||||||||||||
Sbjct: 42 taaagattttcttgcaagatgtgcagttgctgcc 9
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaat 54
||||||| | || |||||||||| |||||||||||||
Sbjct: 1 aagcttgtggcagcaactgcacatcttgcaagaaaat 37
>45742_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaa 53
||||||||| ||||||||||||||||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
|||||||||||| | |||||||| |||||| |||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
>45712_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaaa 53
||||||||| ||||||||||||||||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 78 ttttcttgcaagatatgcagttgctgcctctagctt 113
|||||||||||| | |||||||| |||||| |||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
>45665_miR444:micropc
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 gcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||| || ||||||||||||||||||||||
Sbjct: 111 gcagcaagcttgaggcagcaactgcacaacttgcaagaaa 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | ||||||||||||||| ||||||
Sbjct: 72 tttcttgcaagttgtgcagttgctgcctcaagcttg 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaa 52
||||| |||| ||||||||||| ||||||||||||
Sbjct: 5 caagcatgaggcaacaactgcattacttgcaagaaa 40
>46669_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
||||||||| |||||||||||||||||||||||||
Sbjct: 136 aagcttgaggcaacaactgcacaacttgcaagaaa 102
>46544_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
||||||||| |||||||||||||||||||||||||
Sbjct: 136 aagcttgaggcaacaactgcacaacttgcaagaaa 102
>46412_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||| ||||||||||||||||||||||
Sbjct: 1 aagcttgagacagcaactgcacaacttgcaagaaa 35
>45976_miR444:micropc
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
||||||||| |||||||||||||||||||||||||
Sbjct: 133 aagcttgaggcaacaactgcacaacttgcaagaaa 99
>46601_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 gcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||| || ||||||||| ||||||||||||
Sbjct: 151 gcagcaagcttgaggcagcaactgcacgacttgcaagaaa 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| ||||||||||||||| ||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttg 147
>45144_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 gcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||| || ||||||||| ||||||||||||
Sbjct: 151 gcagcaagcttgaggcagcaactgcacgacttgcaagaaa 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| ||||||||||||||| ||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttg 147
>46299_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||| |||||||||||||||| |||||
Sbjct: 103 aagcttgagacagcaactgcacaacttgcgagaaa 69
>45960_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||| |||||||||||||||| |||||
Sbjct: 103 aagcttgagacagcaactgcacaacttgcgagaaa 69
>45334_miR444:micropc
Length = 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
||||||||| || ||||||||||||||||||||||
Sbjct: 101 aagcttgaggcagcaactgcacaacttgcaagaaa 67
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||| | ||||||||||||||| |||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
>46094_miR444:micropc
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 13 gcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||| || |||||||| ||||||||||||
Sbjct: 151 gcagcaagcttgaggcagcaactgcatgacttgcaagaaa 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| |||||||||||||||| ||||||
Sbjct: 112 tttcttgcaagtcatgcagttgctgcctcaagcttg 147
>46182_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
||||||||| || ||||||||| ||||||||||||
Sbjct: 144 aagcttgaggcagcaactgcacgacttgcaagaaa 110
>45904_miR444:micropc
Length = 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagctt 113
||||||||||| |||||||||||||||| |||||
Sbjct: 107 tttcttgcaagtcatgcagttgctgcctcaagctt 141
>44855_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 18 aagcttgagacaacaactgcacaacttgcaagaaa 52
||||||||| || ||||||||| ||||||||||||
Sbjct: 144 aagcttgaggcagcaactgcacgacttgcaagaaa 110
