miRNEST 2.0, an integrative microRNA resource :: BLAST
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 206 bits (104), Expect = 3e-54
Identities = 107/108 (99%)
Strand = Plus / Minus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 108 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcgaa 49
Query: 72 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 119
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 1
>42086_osa-MIR444c:mirbase
Length = 138
Score = 163 bits (82), Expect = 4e-41
Identities = 106/114 (92%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 135 tggcaaagggaggcagcaagcttgagacaacaactgcacagcttgcaagaaaatcatcgg 76
Query: 61 tatggttcaaaaaccaattttcttgcaagatatgcagttgctgcctctagcttg 114
||||| |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 75 tatggccataaaaccgattttcttgcaagatatgcagttgctgtctctagcttg 22
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaat 54
|||||| ||||||| |||||| |||||||| | |||||||||||||
Sbjct: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaat 59
>42085_osa-MIR444c:mirbase
Length = 138
Score = 163 bits (82), Expect = 4e-41
Identities = 106/114 (92%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 135 tggcaaagggaggcagcaagcttgagacaacaactgcacagcttgcaagaaaatcatcgg 76
Query: 61 tatggttcaaaaaccaattttcttgcaagatatgcagttgctgcctctagcttg 114
||||| |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 75 tatggccataaaaccgattttcttgcaagatatgcagttgctgtctctagcttg 22
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaat 54
|||||| ||||||| |||||| |||||||| | |||||||||||||
Sbjct: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaat 59
>42084_osa-MIR444b:mirbase
Length = 138
Score = 153 bits (77), Expect = 4e-38
Identities = 124/137 (90%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 137 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcgg 78
Query: 61 tatggt-tcaaaaacc-----aattttcttgcaagatatgcagttgctgcctctagcttg 114
|||||| | ||||||| ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 77 tatggtctgaaaaaccctaaagattttcttgcaagatgtgcagttgctgccacaagcttg 18
Query: 115 tcacca-ccccttgcat 130
|||||| ||||||||||
Sbjct: 17 tcaccatccccttgcat 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaaat 54
|||||||| | || |||||||||| |||||||||||||
Sbjct: 18 caagcttgtggcagcaactgcacatcttgcaagaaaat 55
>42083_osa-MIR444b:mirbase
Length = 138
Score = 153 bits (77), Expect = 4e-38
Identities = 124/137 (90%), Gaps = 7/137 (5%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 137 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcgg 78
Query: 61 tatggt-tcaaaaacc-----aattttcttgcaagatatgcagttgctgcctctagcttg 114
|||||| | ||||||| ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 77 tatggtctgaaaaaccctaaagattttcttgcaagatgtgcagttgctgccacaagcttg 18
Query: 115 tcacca-ccccttgcat 130
|||||| ||||||||||
Sbjct: 17 tcaccatccccttgcat 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaaat 54
|||||||| | || |||||||||| |||||||||||||
Sbjct: 18 caagcttgtggcagcaactgcacatcttgcaagaaaat 55
>42091_osa-MIR444f:mirbase
Length = 154
Score = 79.8 bits (40), Expect = 5e-16
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 153 ggaggcagcaagcttgaggcaacaactgcacaacttgcaagaaa 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | |||||||| |||||| ||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagcttg 145
>42089_osa-MIR444d:mirbase
Length = 143
Score = 79.8 bits (40), Expect = 5e-16
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 140 tggcagagggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | ||||||||||||||| ||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttg 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||| ||||| |||| ||||||||||| ||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 57
>42088_osa-MIR444d:mirbase
Length = 143
Score = 79.8 bits (40), Expect = 5e-16
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 140 tggcagagggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | ||||||||||||||| ||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttg 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||| ||||| |||| ||||||||||| ||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 57
>42087_osa-MIR444d:mirbase
Length = 143
Score = 79.8 bits (40), Expect = 5e-16
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 140 tggcagagggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | ||||||||||||||| ||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagcttg 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||| ||||| |||| ||||||||||| ||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 57
>42648_tae-MIR444:mirbase
Length = 426
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 185 tggcaaagggaggcagcaagcttgaggcagcaactgcatgacttgcaagaaa 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| |||||||||||||||| ||||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169
>42082_osa-MIR444a:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatg 64
|||||||||||||||||| || |||||||| |||||||||||| || |||||||||
Sbjct: 123 ggaggcagcaagcttgaggcagcaactgcataacttgcaagaatatcatcggtatg 68
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 80 ttcttgcaagatatgcagttgctgcctctagcttg 114
|||||||||| ||||||||||||||||| ||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttg 115
>42081_osa-MIR444a:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatg 64
|||||||||||||||||| || |||||||| |||||||||||| || |||||||||
Sbjct: 123 ggaggcagcaagcttgaggcagcaactgcataacttgcaagaatatcatcggtatg 68
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 80 ttcttgcaagatatgcagttgctgcctctagcttg 114
|||||||||| ||||||||||||||||| ||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttg 115
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 ggagtcagcaagcttgagacagcaactgcacaacttgcaagaaa 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | ||||||||||| ||| ||||||
Sbjct: 78 tttcttgcaagttgtgcagttgctgtctcaagcttg 113
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaaa 53
|||||||||| ||||||||||||||||||||||||||
Sbjct: 105 caagcttgaggcaacaactgcacaacttgcaagaaaa 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 78 ttttcttgcaagatatgcagttgctgcctctagcttg 114
|||||||||||| | |||||||| |||||| ||||||
Sbjct: 69 ttttcttgcaagttgtgcagttgttgcctcaagcttg 105
>42649_tae-MIR444b:mirbase
Length = 162
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 9 ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||||||| || ||||||||| ||||||||||||
Sbjct: 153 ggaggcagcaagcttgaggcagcaactgcacgacttgcaagaaa 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| ||||||||||||||| ||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagcttg 145
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||| |||||||||||||||||||||||||
Sbjct: 106 caagcttgaggcaacaactgcacaacttgcaagaaa 71
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| | |||||||| |||||| ||||||
Sbjct: 71 tttcttgcaagttgtgcagttgttgcctcaagcttg 106
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 11 aggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
|||||||||||||||| || ||||||||| ||||||||||||
Sbjct: 114 aggcagcaagcttgaggcagcaactgcacgacttgcaagaaa 73
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 79 tttcttgcaagatatgcagttgctgcctctagcttg 114
||||||||||| ||||||||||||||| ||||||
Sbjct: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttg 108
>42090_osa-MIR444e:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 79 tttcttgcaagatatgcagttgctgcctctagctt 113
||||| ||||| |||||||||| ||||||||||||
Sbjct: 56 tttctcgcaagttatgcagttggtgcctctagctt 22
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 85 gcaagatatgcagttgctgcctctagctt 113
||||| ||||||||||||||||| |||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagctt 119
>41805_bdi-MIR444:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 13 gcagcaagcttgagacaacaactgcacaactt 44
|||||||||||||| || |||||||| |||||
Sbjct: 110 gcagcaagcttgaggcagcaactgcataactt 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 tatgcagttgctgcctctagcttg 114
||||||||||||||||| ||||||
Sbjct: 83 tatgcagttgctgcctcaagcttg 106
