miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54220_ptc-miRf12398-akr:pmrd
          Length = 69

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 21 aaaaccgaaccgaaccgaaccgaaa 45
          |||||||||||||||||||||||||
Sbjct: 1  aaaaccgaaccgaaccgaaccgaaa 25




>53966_ptc-miRf12144-akr:pmrd
          Length = 77

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 21 aaaaccgaaccgaaccgaaccgaaatt 47
          |||||||||| ||||||||||||||||
Sbjct: 5  aaaaccgaactgaaccgaaccgaaatt 31



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 23 aaccgaaccgaaccgaaccgaaa 45
          |||||||||||||||||||||||
Sbjct: 71 aaccgaaccgaaccgaaccgaaa 49



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 23 aaccgaaccgaaccgaaccgaa 44
          ||||||||||||||||||||||
Sbjct: 76 aaccgaaccgaaccgaaccgaa 55




>52930_ptc-miRf11108-akr:pmrd
          Length = 79

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 23 aaccgaaccgaaccgaaccgaaa 45
          |||||||||||||||||||||||
Sbjct: 17 aaccgaaccgaaccgaaccgaaa 39



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 aaccgaaccgaaccgaaccgaa 44
          ||||||||||||||||||||||
Sbjct: 7  aaccgaaccgaaccgaaccgaa 28



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 aaccgaaccgaaccgaaccgaa 44
          ||||||||||||||||||||||
Sbjct: 12 aaccgaaccgaaccgaaccgaa 33




>54261_ptc-miRf12439-akr:pmrd
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 21 aaaaccgaaccgaaccgaaccg 42
          ||||||||||||||||||||||
Sbjct: 34 aaaaccgaaccgaaccgaaccg 13




>54026_ptc-miRf12204-akr:pmrd
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 21 aaaaccgaaccgaaccgaaccg 42
          ||||||||||||||||||||||
Sbjct: 34 aaaaccgaaccgaaccgaaccg 13




>53912_ptc-miRf12090-akr:pmrd
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 21 aaaaccgaaccgaaccgaaccg 42
          ||||||||||||||||||||||
Sbjct: 34 aaaaccgaaccgaaccgaaccg 13




>53910_ptc-miRf12088-akr:pmrd
          Length = 90

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 21 aaaaccgaaccgaaccgaaccg 42
          ||||||||||||||||||||||
Sbjct: 34 aaaaccgaaccgaaccgaaccg 13




>54339_ptc-miRf12517-akr:pmrd
          Length = 92

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 aaaccgaaccgaaccgaaccg 42
          |||||||||||||||||||||
Sbjct: 72 aaaccgaaccgaaccgaaccg 92



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 aaccgaaccgaaccgaaat 46
          |||||||||||||||||||
Sbjct: 22 aaccgaaccgaaccgaaat 4




>54074_ptc-miRf12252-akr:pmrd
          Length = 92

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 aaaccgaaccgaaccgaaccg 42
          |||||||||||||||||||||
Sbjct: 72 aaaccgaaccgaaccgaaccg 92



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 aaccgaaccgaaccgaaat 46
          |||||||||||||||||||
Sbjct: 22 aaccgaaccgaaccgaaat 4




>53838_ptc-miRf12016-akr:pmrd
          Length = 127

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  aaaaccgaaccgaaccgaacc 41
           |||||||||||||||||||||
Sbjct: 121 aaaaccgaaccgaaccgaacc 101




>53731_ptc-miRf11909-akr:pmrd
          Length = 74

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 21 aaaaccgaaccgaaccgaaccgaaa 45
          ||||| |||||||||||||||||||
Sbjct: 4  aaaactgaaccgaaccgaaccgaaa 28




>53395_ptc-miRf11573-akr:pmrd
          Length = 74

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 21 aaaaccgaaccgaaccgaaccgaaa 45
          ||||| |||||||||||||||||||
Sbjct: 4  aaaactgaaccgaaccgaaccgaaa 28




>54349_ptc-miRf12527-akr:pmrd
          Length = 68

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 23 aaccgaaccgaaccgaaccg 42
          ||||||||||||||||||||
Sbjct: 7  aaccgaaccgaaccgaaccg 26




>54306_ptc-miRf12484-akr:pmrd
          Length = 100

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 gaaccgaaccgaaccgaaa 45
          |||||||||||||||||||
Sbjct: 29 gaaccgaaccgaaccgaaa 11




>54036_ptc-miRf12214-akr:pmrd
          Length = 99

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 gaaccgaaccgaaccgaaa 45
          |||||||||||||||||||
Sbjct: 24 gaaccgaaccgaaccgaaa 6




>53686_ptc-miRf11864-akr:pmrd
          Length = 69

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 23 aaccgaaccgaaccgaaccgaaa 45
          |||||||||||| ||||||||||
Sbjct: 67 aaccgaaccgaatcgaaccgaaa 45




>53625_ptc-miRf11803-akr:pmrd
          Length = 152

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  aaaaccgaaccgaaccgaa 39
           |||||||||||||||||||
Sbjct: 100 aaaaccgaaccgaaccgaa 82




>53555_ptc-miRf11733-akr:pmrd
          Length = 99

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 gaaccgaaccgaaccgaaa 45
          |||||||||||||||||||
Sbjct: 24 gaaccgaaccgaaccgaaa 6




>53388_ptc-miRf11566-akr:pmrd
          Length = 99

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 gaaccgaaccgaaccgaaa 45
          |||||||||||||||||||
Sbjct: 29 gaaccgaaccgaaccgaaa 11




>52512_ptc-miRf10690-akr:pmrd
          Length = 120

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 gaaccgaaccgaaccgaaa 45
          |||||||||||||||||||
Sbjct: 21 gaaccgaaccgaaccgaaa 39




>51832_ptc-miRf10010-akr:pmrd
          Length = 97

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 gaaccgaaccgaaccgaaa 45
          |||||||||||||||||||
Sbjct: 70 gaaccgaaccgaaccgaaa 88