miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9ZQ34|Y2433_ARATH Uncharacterized protein At2g24330
OS=Arabidopsis thaliana GN=At2g24330 PE=2 SV=1
Length = 408
Score = 47.0 bits (110), Expect(2) = 1e-06
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 56 AVSYAIMSTRDEDLDWKLRSFR 121
AVSYAIM+TRDEDLDWKLRSFR
Sbjct: 99 AVSYAIMTTRDEDLDWKLRSFR 120
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 3 RKLIRNLIAFSVF 41
R IRNLIAFSVF
Sbjct: 82 RNFIRNLIAFSVF 94
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q944G5|PTR44_ARATH Probable peptide/nitrate transporter
At3g47960 OS=Arabidopsis thaliana GN=At3g47960 PE=1 SV=2
Length = 636
Score = 65.5 bits (158), Expect = 1e-10
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 95 LKPVKQPWVDLYNHIPRNYANLTLKYTDQFR 3
LKPVKQPWV+LYNHIP NYAN TLKYTDQFR
Sbjct: 300 LKPVKQPWVNLYNHIPSNYANTTLKYTDQFR 330
>sp|Q9LV10|PTR53_ARATH Probable peptide/nitrate transporter
At5g62680 OS=Arabidopsis thaliana GN=At5g62680 PE=2 SV=1
Length = 616
Score = 53.1 bits (126), Expect = 5e-07
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -3
Query: 95 LKPVKQPWVDLYNHIPRNYANLTLKYTDQFR 3
LKP KQPW++LYN+ P YAN LKYTDQFR
Sbjct: 284 LKPAKQPWLNLYNYYPPKYANSKLKYTDQFR 314
