miRNEST 2.0, an integrative microRNA resource :: BLAST
>45921_miR162:micropc
Length = 110
Score = 111 bits (56), Expect = 1e-25
Identities = 95/110 (86%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctgtggannnnnnnnnnggttg-tttgttgtt 69
||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgtggatttttttgtttgtttctttgttgtt 60
Query: 70 gttggaaagagattaaaagcatgaacggatcgataaacctctgcatccag 119
||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 61 gttggaaagagattaaaagcacgaacagatcgataaacctctgcatccag 110
>45508_miR162:micropc
Length = 108
Score = 107 bits (54), Expect = 2e-24
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctgtggannnnnnnnnnggttg-tttgttgttg 70
|||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgtggatttttttgtttgtttctttgttgttg 60
Query: 71 ttggaaagagattaaaagcatgaacggatcgataaacctctgcatcca 118
|||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 61 ttggaaagagattaaaagcacgaacagatcgataaacctctgcatcca 108
>46549_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 70 gatcgataaacctctgcatccag 92
>46096_miR162:micropc
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccag 87
>46039_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 70 gatcgataaacctctgcatccag 92
>45545_miR162:micropc
Length = 91
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 69 gatcgataaacctctgcatccag 91
>46511_miR162:micropc
Length = 89
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 68 gatcgataaacctctgcatcca 89
>46504_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 69 gatcgataaacctctgcatcca 90
>45903_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 69 gatcgataaacctctgcatcca 90
>44920_miR162:micropc
Length = 85
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85
>46456_miR162:micropc
Length = 89
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctg 32
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 84 aaaagcatgaacggatcgataaacctctgcatccag 119
|||| ||||||| |||||||||||||||||||||||
Sbjct: 54 aaaaacatgaaccgatcgataaacctctgcatccag 89
>45283_miR162:micropc
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctg 31
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 84 aaaagcatgaacggatcgataaacctctgcatcca 118
|||| ||||||| ||||||||||||||||||||||
Sbjct: 53 aaaaacatgaaccgatcgataaacctctgcatcca 87
>44984_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
||||| |||||||||||||||||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctcttcctg 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 65 tcgataaacctctgcatccag 85
>46792_miR162:micropc
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
|||| |||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 64 tcgataaacctctgcatcca 83
>46676_miR162:micropc
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 86 aagcatgaacggatcgataaacctctgcatccag 119
||||||||| |||||||||||||||||||||||
Sbjct: 64 aagcatgaatcgatcgataaacctctgcatccag 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctgtg 43
||||||||||||||||||||||| ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtg 33
>44934_miR162:micropc
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 86 aagcatgaacggatcgataaacctctgcatccag 119
||||||||| |||||||||||||||||||||||
Sbjct: 64 aagcatgaatcgatcgataaacctctgcatccag 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctgtg 43
||||||||||||||||||||||| ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtg 33
>46394_miR162:micropc
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 86 aagcatgaacggatcgataaacctctgcatcca 118
||||||||| ||||||||||||||||||||||
Sbjct: 63 aagcatgaatcgatcgataaacctctgcatcca 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctgtg 43
|||||||||||||||||||||| ||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtg 32
>46364_miR162:micropc
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 86 aagcatgaacggatcgataaacctctgcatcca 118
||||||||| ||||||||||||||||||||||
Sbjct: 63 aagcatgaatcgatcgataaacctctgcatcca 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctgtg 43
|||||||||||||||||||||| ||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtg 32
>45617_miR162:micropc
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatct 34
||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatct 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 68 tcgataaacctctgcatccag 88
>46817_miR162:micropc
Length = 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccag 93
>46026_miR162:micropc
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
||||| |||||||||||||||||| ||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctg 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccag 87
>45991_miR162:micropc
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 86 gatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatccag 111
>45757_miR162:micropc
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatct 34
|||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatct 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatcca 86
>45749_miR162:micropc
Length = 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatccag 119
|||||||||||||||||||||||
Sbjct: 77 gatcgataaacctctgcatccag 99
>46597_miR162:micropc
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatc 33
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 70 gatcgataaacctctgcatcca 91
>46557_miR162:micropc
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctg 41
|||| |||||||||||||||||| ||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctg 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85
>46457_miR162:micropc
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 76 gatcgataaacctctgcatcca 97
>44845_miR162:micropc
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcgataaacctctgcatcca 118
||||||||||||||||||||||
Sbjct: 85 gatcgataaacctctgcatcca 106
>46628_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcc 39
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>46169_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcc 39
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>45084_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcc 39
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>44890_miR162:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcc 39
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141
>44807_miR162:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcc 39
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatccag 119
|||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141
>46470_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcc 39
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcc 39
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcc 39
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45416_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcc 39
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
>45197_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcc 39
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 tcgataaacctctgcatcca 118
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
