miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00027;let-7;AAQR01020418.1/249-164 30611:Otolemur garnettii
          (small-eared galago)
          Length = 86

 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  gggtgaggtagtaggttgtgtgg 23
          |||||||||||||||||||||||
Sbjct: 4  gggtgaggtagtaggttgtgtgg 26




>RF00027;let-7;AAGW01230269.1/1770-1854 9986:Oryctolagus cuniculus
          (rabbit)
          Length = 85

 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  gggtgaggtagtaggttgtgtgg 23
          |||||||||||||||||||||||
Sbjct: 4  gggtgaggtagtaggttgtgtgg 26




>RF00027;let-7;AANH01001398.1/49056-49141 69293:Gasterosteus
          aculeatus (three-spined stickleback)
          Length = 86

 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  gggtgaggtagtaggttgtgtgg 23
          |||||||||||||||||||||||
Sbjct: 4  gggtgaggtagtaggttgtgtgg 26




>RF00027;let-7;BAAE01218263.1/598-683 8090:Oryzias latipes
          (Japanese medaka)
          Length = 86

 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  gggtgaggtagtaggttgtgtgg 23
          |||||||||||||||||||||||
Sbjct: 4  gggtgaggtagtaggttgtgtgg 26




>RF00027;let-7;AAWZ01027397.1/1152-1066 28377:Anolis carolinensis
          (green anole)
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 2  ggtgaggtagtaggttgtgtgg 23
          ||||||||||||||||||||||
Sbjct: 5  ggtgaggtagtaggttgtgtgg 26