miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41113_tcc-MIR169l:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 47 tagtgcagccaaggatgacttgccgg 72
||||||||||||||||||||||||||
Sbjct: 16 tagtgcagccaaggatgacttgccgg 41
>40687_mtr-MIR169j:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 48 agtgcagccaaggatgacttgccggt 73
||||||||||||||||||||||||||
Sbjct: 2 agtgcagccaaggatgacttgccggt 27
>41607_vvi-MIR169k:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 agtgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||||
Sbjct: 9 agtgcagccaaggatgacttgccgg 33
>41606_vvi-MIR169j:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 agtgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||||
Sbjct: 9 agtgcagccaaggatgacttgccgg 33
>41965_osa-MIR169b:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccggt 73
||||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccggt 32
>41619_vvi-MIR169w:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccgg 72
||||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccgg 33
>41536_sly-MIR169c:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 agtgcagccaaggatgacttgccg 71
||||||||||||||||||||||||
Sbjct: 37 agtgcagccaaggatgacttgccg 60
>41360_ptc-MIR169f:mirbase
Length = 239
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccgg 72
||||||||||||||||||||||||
Sbjct: 8 gtgcagccaaggatgacttgccgg 31
>41112_tcc-MIR169k:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccgg 72
||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccgg 41
>41106_tcc-MIR169e:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 agtgcagccaaggatgacttgccg 71
||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccg 40
>41102_tcc-MIR169a:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 48 agtgcagccaaggatgacttgccg 71
||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccg 40
>42745_zma-MIR169c:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41
>42744_zma-MIR169b:mirbase
Length = 156
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40
>42743_zma-MIR169a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40
>41979_osa-MIR169p:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 118 tgcagccaaggatgacttgccgg 96
>41966_osa-MIR169c:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccgg 31
>41964_osa-MIR169a:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 35 gtgcagccaaggatgacttgccg 57
>41758_bdi-MIR169f:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccgg 53
>41755_bdi-MIR169c:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccgg 53
>41615_vvi-MIR169s:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33
>41603_vvi-MIR169g:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32
>41602_vvi-MIR169f:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32
>41599_vvi-MIR169c:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33
>41597_vvi-MIR169a:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33
>41534_sly-MIR169a:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccgg 61
>41361_ptc-MIR169g:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccgg 31
>41358_ptc-MIR169d:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccgg 31
>41176_aqc-MIR169c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 3 tgcagccaaggatgacttgccgg 25
>41104_tcc-MIR169c:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40
>41103_tcc-MIR169b:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41
>40684_mtr-MIR169g:mirbase
Length = 211
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 4 tgcagccaaggatgacttgccgg 26
>40449_gma-MIR169a:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41
>40273_bna-MIR169b:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccg 37
>40272_bna-MIR169a:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 16 gtgcagccaaggatgacttgccg 38
>40046_ath-MIR169b:mirbase
Length = 181
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 41 tgcagccaaggatgacttgccgg 63
>40045_ath-MIR169a:mirbase
Length = 226
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccg 37
>39835_aly-MIR169b:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccgg 72
|||||||||||||||||||||||
Sbjct: 44 tgcagccaaggatgacttgccgg 66
>39834_aly-MIR169a:mirbase
Length = 263
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 gtgcagccaaggatgacttgccg 71
|||||||||||||||||||||||
Sbjct: 24 gtgcagccaaggatgacttgccg 46
>42760_zma-MIR169r:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gcagccaaggatgacttgccgg 72
||||||||||||||||||||||
Sbjct: 1 gcagccaaggatgacttgccgg 22
>41359_ptc-MIR169e:mirbase
Length = 166
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 gcagccaaggatgacttgccgg 72
||||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccgg 31
>41357_ptc-MIR169c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccg 71
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41356_ptc-MIR169b:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccg 71
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>41349_ptc-MIR169a:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccg 71
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>40679_mtr-MIR169b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccg 71
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>40678_mtr-MIR169a:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccg 71
||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40
>40450_gma-MIR169b:mirbase
Length = 183
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 50 tgcagccaaggatgacttgccg 71
||||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccg 30
>40047_ath-MIR169c:mirbase
Length = 411
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccggt 73
||||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccggt 134
>39836_aly-MIR169c:mirbase
Length = 292
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccggt 73
||||||||||||||||||||||
Sbjct: 45 cagccaaggatgacttgccggt 66
>42539_sbi-MIR169k:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccgg 72
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>42530_sbi-MIR169b:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccgg 72
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgg 21
>41373_ptc-MIR169s:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccgg 72
|||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccgg 32
>41362_ptc-MIR169h:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccgg 72
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31
>40690_mtr-MIR169m:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggt 27
>40689_mtr-MIR169l:mirbase
Length = 240
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggt 27
>40682_mtr-MIR169e:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 8 agccaaggatgacttgccggt 28
>40681_mtr-MIR169d:mirbase
Length = 240
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 7 agccaaggatgacttgccggt 27
>40452_gma-MIR169d:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgccggt 36
>40357_rco-MIR169b:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccgg 72
|||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccgg 26
>40356_rco-MIR169a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 cagccaaggatgacttgccgg 72
|||||||||||||||||||||
Sbjct: 6 cagccaaggatgacttgccgg 26
>40050_ath-MIR169f:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccggt 54
>39839_aly-MIR169f:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgccggt 73
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccggt 63
