miRNEST 2.0, an integrative microRNA resource :: BLAST
>48560_gma-miR168:pmrd
Length = 125
Score = 93.7 bits (47), Expect = 3e-20
Identities = 99/113 (87%), Gaps = 5/113 (4%)
Strand = Plus / Plus
Query: 4 gcggtctctaattcgcttggtgcaggtcgggaaccgatcttcccgcgcgtaatgga--tg 61
|||||||||||||||||||||||||||||||||||| | || |||||| |||||| |
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaaccggtttt--cgcgcggaatggaggag 64
Query: 62 ccgttggcggcggcgaatttggatcccgccttgcatcaaatgaatcggaggcc 114
| || | ||||| |||| ||||||||||||||||||||| |||||||||||||
Sbjct: 65 cggtcgccggcgccgaa-ttggatcccgccttgcatcaactgaatcggaggcc 116
>54802_vvi-miR168:pmrd
Length = 132
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 6 ggtctctaattcgcttggtgcaggtcgggaaccga 40
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccga 35
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 74 gcgaatttggatcccgccttgcatcaaatgaatcggag 111
||||||| |||||||||||||||||| ||||||||||
Sbjct: 90 gcgaattccgatcccgccttgcatcaactgaatcggag 127
>54388_rco-miR168:pmrd
Length = 156
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 4 gcggtctctaattcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaaatgaatcg 108
||||||||||||||||||||| |||||||
Sbjct: 113 ttggatcccgccttgcatcaactgaatcg 141
>51651_ptc-miR168b:pmrd
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 6 ggtctctaattcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||||||||| ||||||||||
Sbjct: 104 ttggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaaatgaatcggagg 112
||||||||||||||||||||| |||||||||||
Sbjct: 128 ttggatcccgccttgcatcaactgaatcggagg 160
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 6 ggtctctaattcgcttggtgcaggtcgggaac 37
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaaatgaatcgga 110
||||||||||||||||||||| |||||||||
Sbjct: 92 ttggatcccgccttgcatcaactgaatcgga 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 attcgcttggtgcaggtcgggaacc 38
|||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaacc 35
>46957_ath-miR168a:pmrd
Length = 138
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaaatgaatcgga 110
||||||||||||||||||||| |||||||||
Sbjct: 97 ttggatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 attcgcttggtgcaggtcgggaacc 38
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>55000_zma-miR168b:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>46958_ath-miR168b:pmrd
Length = 124
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 4 gcggtctctaattcgcttggtgcaggtcgggaac 37
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctcggattcgcttggtgcaggtcgggaac 40
>46959_ath-miR168m:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaacc 38
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaa 100
|||||||||||||||||||||
Sbjct: 80 ttggatcccgccttgcatcaa 100
>54999_zma-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>54637_sof-miR168b:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>54636_sof-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>54375_pts-miR168b:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaa 100
|||||||||||||||||||||
Sbjct: 116 ttggatcccgccttgcatcaa 136
>54374_pts-miR168a:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaa 100
|||||||||||||||||||||
Sbjct: 94 ttggatcccgccttgcatcaa 114
>54366_ptr-miR168:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 ttggatcccgccttgcatcaa 100
|||||||||||||||||||||
Sbjct: 94 ttggatcccgccttgcatcaa 114
>48873_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48872_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48871_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 ggatcccgccttgcatcaaatgaatcggag 111
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>48649_hte-miR168:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48349_bna-miR168:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcgggaac 37
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>54665_stu-miR168:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcggga 35
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 tcgcttggtgcaggtcggga 35
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
