miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40648_mtr-MIR156:mirbase
          Length = 460

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 80  cttgagaggaattccttgaaacaggatcctgagagctctttcttcttctttcattgtgcc 139
           |||| |||||||||||   ||||| ||| || ||||||||||||||||| ||||||||||
Sbjct: 389 cttgtgaggaattcctcccaacagaatcatgggagctctttcttcttctctcattgtgcc 448

              
Query: 140 ctg 142
           |||
Sbjct: 449 ctg 451



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gatgacagaagagagagagcaca 32
          |||||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagcaca 41




>42687_zma-MIR156j:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gatgacagaagagagagagcaca 32
          |||||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagcaca 41




>42488_sbi-MIR156d:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gatgacagaagagagagagcaca 32
          |||||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagcaca 41




>41914_osa-MIR156k:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gatgacagaagagagagagcaca 32
          |||||||||||||||||||||||
Sbjct: 9  gatgacagaagagagagagcaca 31




>39415_pta-MIR156a:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 gatgacagaagagagagagcacatcc 35
          |||||||||||| |||||||||||||
Sbjct: 1  gatgacagaagatagagagcacatcc 26




>41877_far-MIR529:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 48 tgacagaagagagagagcaca 68




>41867_far-MIR156b:mirbase
          Length = 180

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 54 tgacagaagagagagagcaca 74




>41866_far-MIR156a:mirbase
          Length = 180

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 54 tgacagaagagagagagcaca 74




>41726_bdi-MIR156:mirbase
          Length = 147

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  tgacagaagagagagagcaca 32
           |||||||||||||||||||||
Sbjct: 101 tgacagaagagagagagcaca 121




>41204_aqc-MIR529:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcaca 38




>41080_tcc-MIR156a:mirbase
          Length = 124

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41




>40430_gma-MIR156f:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 12 tgacagaagagagagagcaca 32




>40426_gma-MIR156b:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41




>40396_ahy-MIR156c:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 22 tgacagaagagagagagcaca 42




>40393_ahy-MIR156a:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcaca 38




>40334_rco-MIR156e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagagagcaca 32
          |||||||||||||||||||||
Sbjct: 6  tgacagaagagagagagcaca 26




>41568_vvi-MIR156h:mirbase
          Length = 228

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 atgacagaagagagagagca 30
          ||||||||||||||||||||
Sbjct: 10 atgacagaagagagagagca 29