miRNEST 2.0, an integrative microRNA resource :: BLAST
>51807_ptc-miR530b:pmrd
Length = 172
Score = 182 bits (92), Expect = 5e-47
Identities = 145/159 (91%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaa 60
||||||||||||||||||||||||||||||| ||||||||| |||| | |||| |||| |
Sbjct: 10 ttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccaca 68
Query: 61 aaacaaatccaagttccgtgccgatccagaatgtgggacaattagatatggaaactaata 120
|| ||||| |||||| || |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 69 aacaaaatc-aagttctgt--cgatacagtatgtgggacaattagatatggaaactaata 125
Query: 121 agcttagttgaggtgcaggtgcaagtgcaggtgaatgcc 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agcttagttgaggtgcaggtgcaagtgcaggtgaatgcc 164
>53341_ptc-miRf11519-akr:pmrd
Length = 152
Score = 176 bits (89), Expect = 3e-45
Identities = 142/156 (91%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 3 gcctttatctgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaa 62
||||||||||||||||||||||||||||| ||||||||| |||| | |||| |||| |||
Sbjct: 1 gcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaa 59
Query: 63 acaaatccaagttccgtgccgatccagaatgtgggacaattagatatggaaactaataag 122
||||| |||||| || |||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 60 caaaatc-aagttctgt--cgatacagtatgtgggacaattagatatggaaactaataag 116
Query: 123 cttagttgaggtgcaggtgcaagtgcaggtgaatgc 158
||||||||||||||||||||||||||||||||||||
Sbjct: 117 cttagttgaggtgcaggtgcaagtgcaggtgaatgc 152
>52847_ptc-miRf11025-akr:pmrd
Length = 138
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||||| ||||
Sbjct: 7 ttgcctttatctgcatttgcacctgcacctta 38
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 128 ttgaggtgcaggtgcaagtgcaggtgaatgcc 159
|||||||||||||||| |||||||||||||||
Sbjct: 102 ttgaggtgcaggtgcaggtgcaggtgaatgcc 133
>51806_ptc-miR530a:pmrd
Length = 144
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||||| ||||
Sbjct: 10 ttgcctttatctgcatttgcacctgcacctta 41
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 128 ttgaggtgcaggtgcaagtgcaggtgaatgcc 159
|||||||||||||||| |||||||||||||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgcc 136
>52848_ptc-miRf11026-akr:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 128 ttgaggtgcaggtgcaagtgcaggtgaatgc 158
|||||||||||||||| ||||||||||||||
Sbjct: 94 ttgaggtgcaggtgcaggtgcaggtgaatgc 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 gcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||| ||||
Sbjct: 1 gcctttatctgcatttgcacctgcacctta 30
>51904_ptc-miRf10082-akr:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 128 ttgaggtgcaggtgcaagtgcaggtgaa 155
|||||||||||||||| |||||||||||
Sbjct: 91 ttgaggtgcaggtgcaggtgcaggtgaa 118
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tttatctgcatttgcacctgcatctta 32
|||||||||||||||||||||| ||||
Sbjct: 1 tttatctgcatttgcacctgcacctta 27
>46904_aqc-miR530:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tctgcatttgcacctgcatct 30
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
