miRNEST 2.0, an integrative microRNA resource :: BLAST
>51807_ptc-miR530b:pmrd
Length = 172
Score = 264 bits (133), Expect = 2e-71
Identities = 147/149 (98%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgac 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 10 ttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactcc-ac 67
Query: 61 aaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataag 127
Query: 121 cttagttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||||||||||||||||
Sbjct: 128 cttagttgaggtgcaggtgcaagtgcagg 156
>53341_ptc-miRf11519-akr:pmrd
Length = 152
Score = 260 bits (131), Expect = 3e-70
Identities = 145/147 (98%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 3 gcctttatctgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaa 62
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 1 gcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactcc-acaa 58
Query: 63 acaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataagct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 acaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataagct 118
Query: 123 tagttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||||||||||||||
Sbjct: 119 tagttgaggtgcaggtgcaagtgcagg 145
>52847_ptc-miRf11025-akr:pmrd
Length = 138
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||||| ||||
Sbjct: 7 ttgcctttatctgcatttgcacctgcacctta 38
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 ttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||| |||||||
Sbjct: 102 ttgaggtgcaggtgcaggtgcagg 125
>51806_ptc-miR530a:pmrd
Length = 144
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||||| ||||
Sbjct: 10 ttgcctttatctgcatttgcacctgcacctta 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 ttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||| |||||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcagg 128
>52848_ptc-miRf11026-akr:pmrd
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 gcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||| ||||
Sbjct: 1 gcctttatctgcatttgcacctgcacctta 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 ttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||| |||||||
Sbjct: 94 ttgaggtgcaggtgcaggtgcagg 117
>51904_ptc-miRf10082-akr:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 tttatctgcatttgcacctgcatctta 32
|||||||||||||||||||||| ||||
Sbjct: 1 tttatctgcatttgcacctgcacctta 27
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 126 ttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||| |||||||
Sbjct: 91 ttgaggtgcaggtgcaggtgcagg 114
>46904_aqc-miR530:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tctgcatttgcacctgcatct 30
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
