miRNEST 2.0, an integrative microRNA resource :: BLAST
>45885_miR530:micropc
Length = 135
Score = 206 bits (104), Expect = 4e-54
Identities = 129/136 (94%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 12 tgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaaacaaaatca 71
||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 1 tgcatttgcacctgcatcttattgcttttgttttgttcttgactcc-acaaacaaaatca 59
Query: 72 agttctgtcgatacagtatgtgggacaattagatatggaaactaataagcttagttgagg 131
| ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||
Sbjct: 60 acttctgtcgatacagtatgtggtacaattagctatggaaactcataagcttagttgagg 119
Query: 132 tgcaggtgcaagtgca 147
||||||||||||||||
Sbjct: 120 tgcaggtgcaagtgca 135
>46279_miR530:micropc
Length = 148
Score = 172 bits (87), Expect = 5e-44
Identities = 134/150 (89%), Gaps = 16/150 (10%)
Strand = Plus / Plus
Query: 12 tgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaaacaaaatca 71
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactcc-acaaacaaaatca 58
Query: 72 agttctgtcgatacagtatgtgggacaa--------------ttagatatggaaactaat 117
|||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 59 agttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaat 118
Query: 118 aagcttagttgaggtgcaggtgcaagtgca 147
||||||||||||||||||||||||||||||
Sbjct: 119 aagcttagttgaggtgcaggtgcaagtgca 148
>46654_miR1030:micropc
Length = 151
Score = 170 bits (86), Expect = 2e-43
Identities = 136/153 (88%), Gaps = 16/153 (10%)
Strand = Plus / Minus
Query: 11 ctgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaaacaaaatc 70
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 151 ctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactcc-acaaacaaaatc 94
Query: 71 aagttctgtcgatacagtatgtgggacaattag--------------atatggaaactaa 116
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 93 aagttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaa 34
Query: 117 taagcttagttgaggtgcaggtgcaagtgcagg 149
||||||||||||||||||||||||| |||||||
Sbjct: 33 taagcttagttgaggtgcaggtgcaggtgcagg 1
>45830_miR1030:micropc
Length = 150
Score = 168 bits (85), Expect = 8e-43
Identities = 135/152 (88%), Gaps = 16/152 (10%)
Strand = Plus / Minus
Query: 11 ctgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaaacaaaatc 70
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 150 ctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactcc-acaaacaaaatc 93
Query: 71 aagttctgtcgatacagtatgtgggacaattag--------------atatggaaactaa 116
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 92 aagttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaa 33
Query: 117 taagcttagttgaggtgcaggtgcaagtgcag 148
||||||||||||||||||||||||| ||||||
Sbjct: 32 taagcttagttgaggtgcaggtgcaggtgcag 1
>45983_miR530:micropc
Length = 138
Score = 165 bits (83), Expect = 1e-41
Identities = 125/138 (90%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 12 tgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaaacaaaatca 71
|||||||||||||||||||||||||||||| |||| | |||| ||| | ||||||| ||
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 72 agttctgt--cgatacagtatgtgggacaattagatatggaaactaataagcttagttga 129
||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaattagatatggaaactaataagcttagttga 120
Query: 130 ggtgcaggtgcaagtgca 147
||||||||||||||||||
Sbjct: 121 ggtgcaggtgcaagtgca 138
>45671_miR530:micropc
Length = 138
Score = 165 bits (83), Expect = 1e-41
Identities = 125/138 (90%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 12 tgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgacaaacaaaatca 71
|||||||||||||||||||||||||||||| |||| | |||| ||| | ||||||| ||
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 72 agttctgt--cgatacagtatgtgggacaattagatatggaaactaataagcttagttga 129
||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaattagatatggaaactaataagcttagttga 120
Query: 130 ggtgcaggtgcaagtgca 147
||||||||||||||||||
Sbjct: 121 ggtgcaggtgcaagtgca 138
>46152_miR530:micropc
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tgcatttgcacctgcatcttattgcgtt 39
|||||||||||||||||||| |||||||
Sbjct: 1 tgcatttgcacctgcatcttgttgcgtt 28
>45910_miR530:micropc
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tgcatttgcacctgcatcttattgcgtt 39
|||||||||||||||||||| |||||||
Sbjct: 1 tgcatttgcacctgcatcttgttgcgtt 28
>44837_miR1030:micropc
Length = 109
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 126 ttgaggtgcaggtgcaagtgcagg 149
|||||||||||||||| |||||||
Sbjct: 24 ttgaggtgcaggtgcaggtgcagg 1
