miRNEST 2.0, an integrative microRNA resource :: BLAST
>41510_ptc-MIR530b:mirbase
Length = 172
Score = 311 bits (157), Expect = 1e-85
Identities = 170/173 (98%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 9 gccaatatgttgcctttatctgcatttgcacctgcatcttattgcgtgggttttgttttt 68
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgttttt 59
Query: 69 gactccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaa 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gactccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaa 119
Query: 129 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 172
>41509_ptc-MIR530a:mirbase
Length = 144
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 9 gccaatatgttgcctttatctgcatttgcacctgcatctta 49
||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgcacctta 41
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 181
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
>41263_csi-MIR530b:mirbase
Length = 154
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 21 cctttatctgcatttgcacctgcatcttattgcgt 55
|||||||||||||||||||||||||||| ||||||
Sbjct: 3 cctttatctgcatttgcacctgcatcttgttgcgt 37
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 145 aggtgcaggtgcaagtgcaggtgaatgcc 173
|||||||| ||||||||||| ||||||||
Sbjct: 126 aggtgcagttgcaagtgcagatgaatgcc 154
>41158_tcc-MIR530b:mirbase
Length = 178
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 atgttgcctttatctgcatttgcacctgca 44
|||| |||||||||||||||||||||||||
Sbjct: 7 atgtagcctttatctgcatttgcacctgca 36
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 144 gaggtgcaggtgcaagtgcaggtgaatgccattttgg 180
|||||||||| ||| |||||||||||||||||||||
Sbjct: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
>41157_tcc-MIR530a:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tttatctgcatttgcacctgca 44
||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36
>41205_aqc-MIR530:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 tctgcatttgcacctgcatct 47
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
