miRNEST 2.0, an integrative microRNA resource :: BLAST
>51807_ptc-miR530b:pmrd
Length = 172
Score = 311 bits (157), Expect = 1e-85
Identities = 170/173 (98%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 9 gccaatatgttgcctttatctgcatttgcacctgcatcttattgcgtgggttttgttttt 68
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgttttt 59
Query: 69 gactccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaa 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gactccacaaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaa 119
Query: 129 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 172
>53341_ptc-miRf11519-akr:pmrd
Length = 152
Score = 272 bits (137), Expect = 9e-74
Identities = 150/153 (98%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 20 gcctttatctgcatttgcacctgcatcttattgcgtgggttttgtttttgactccacaaa 79
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1 gcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaa 59
Query: 80 caaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataagctt 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 caaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataagctt 119
Query: 140 agttgaggtgcaggtgcaagtgcaggtgaatgc 172
|||||||||||||||||||||||||||||||||
Sbjct: 120 agttgaggtgcaggtgcaagtgcaggtgaatgc 152
>51806_ptc-miR530a:pmrd
Length = 144
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 9 gccaatatgttgcctttatctgcatttgcacctgcatctta 49
||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgcacctta 41
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 181
|||||||||||||||| ||||||||||||||||| |||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
>52847_ptc-miRf11025-akr:pmrd
Length = 138
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 atgttgcctttatctgcatttgcacctgcatctta 49
|||||||||||||||||||||||||||||| ||||
Sbjct: 4 atgttgcctttatctgcatttgcacctgcacctta 38
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgccat 175
|||||||||||||||| |||||||||||||||||
Sbjct: 102 ttgaggtgcaggtgcaggtgcaggtgaatgccat 135
>52848_ptc-miRf11026-akr:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgc 172
|||||||||||||||| ||||||||||||||
Sbjct: 94 ttgaggtgcaggtgcaggtgcaggtgaatgc 124
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 20 gcctttatctgcatttgcacctgcatctta 49
||||||||||||||||||||||||| ||||
Sbjct: 1 gcctttatctgcatttgcacctgcacctta 30
>51904_ptc-miRf10082-akr:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaa 169
|||||||||||||||| |||||||||||
Sbjct: 91 ttgaggtgcaggtgcaggtgcaggtgaa 118
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 tttatctgcatttgcacctgcatctta 49
|||||||||||||||||||||| ||||
Sbjct: 1 tttatctgcatttgcacctgcacctta 27
>46904_aqc-miR530:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 tctgcatttgcacctgcatct 47
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
