miRNEST 2.0, an integrative microRNA resource :: BLAST
>46279_miR530:micropc
Length = 148
Score = 159 bits (80), Expect = 9e-40
Identities = 129/148 (87%), Gaps = 13/148 (8%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttatgcgttggtttcgtttttgactccacaaacaaaatcaag 88
|||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 60
Query: 89 ttctgtcgatacagtatgtgggacaat-------------ggacatatggaaactaataa 135
||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 61 ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 120
Query: 136 gcttagttgaggtgcaggtgcaagtgca 163
||||||||||||||||||||||||||||
Sbjct: 121 gcttagttgaggtgcaggtgcaagtgca 148
>45885_miR530:micropc
Length = 135
Score = 159 bits (80), Expect = 9e-40
Identities = 124/136 (91%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttat-gcgttggtttcgtttttgactccacaaacaaaatcaa 87
|||||||||||||||||||||| || || |||| ||| ||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatcttattgcttttgttttgttcttgactccacaaacaaaatcaa 60
Query: 88 gttctgtcgatacagtatgtgggacaatggacatatggaaactaataagcttagttgagg 147
||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||
Sbjct: 61 cttctgtcgatacagtatgtggtacaat-tagctatggaaactcataagcttagttgagg 119
Query: 148 tgcaggtgcaagtgca 163
||||||||||||||||
Sbjct: 120 tgcaggtgcaagtgca 135
>46654_miR1030:micropc
Length = 151
Score = 157 bits (79), Expect = 4e-39
Identities = 131/151 (86%), Gaps = 13/151 (8%)
Strand = Plus / Minus
Query: 28 ctgcatttgcacctgcatcttatgcgttggtttcgtttttgactccacaaacaaaatcaa 87
||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct: 151 ctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaa 92
Query: 88 gttctgtcgatacagtatgtgggacaat-------------ggacatatggaaactaata 134
|||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 91 gttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaata 32
Query: 135 agcttagttgaggtgcaggtgcaagtgcagg 165
||||||||||||||||||||||| |||||||
Sbjct: 31 agcttagttgaggtgcaggtgcaggtgcagg 1
>45830_miR1030:micropc
Length = 150
Score = 155 bits (78), Expect = 1e-38
Identities = 130/150 (86%), Gaps = 13/150 (8%)
Strand = Plus / Minus
Query: 28 ctgcatttgcacctgcatcttatgcgttggtttcgtttttgactccacaaacaaaatcaa 87
||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct: 150 ctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaa 91
Query: 88 gttctgtcgatacagtatgtgggacaat-------------ggacatatggaaactaata 134
|||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 90 gttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaata 31
Query: 135 agcttagttgaggtgcaggtgcaagtgcag 164
||||||||||||||||||||||| ||||||
Sbjct: 30 agcttagttgaggtgcaggtgcaggtgcag 1
>45983_miR530:micropc
Length = 138
Score = 95.6 bits (48), Expect = 1e-20
Identities = 120/139 (86%), Gaps = 5/139 (3%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttat-gcgttggtttcgtttttgactccacaaacaaaatc-a 86
|||||||||||||||||||||| ||||| | || | | |||| |||| ||| ||||| |
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 87 agttctgt--cgatacagtatgtgggacaatggacatatggaaactaataagcttagttg 144
||||| || |||| ||| |||||||||||| | |||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaatt-agatatggaaactaataagcttagttg 119
Query: 145 aggtgcaggtgcaagtgca 163
|||||||||||||||||||
Sbjct: 120 aggtgcaggtgcaagtgca 138
>45671_miR530:micropc
Length = 138
Score = 95.6 bits (48), Expect = 1e-20
Identities = 120/139 (86%), Gaps = 5/139 (3%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatcttat-gcgttggtttcgtttttgactccacaaacaaaatc-a 86
|||||||||||||||||||||| ||||| | || | | |||| |||| ||| ||||| |
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 87 agttctgt--cgatacagtatgtgggacaatggacatatggaaactaataagcttagttg 144
||||| || |||| ||| |||||||||||| | |||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaatt-agatatggaaactaataagcttagttg 119
Query: 145 aggtgcaggtgcaagtgca 163
|||||||||||||||||||
Sbjct: 120 aggtgcaggtgcaagtgca 138
>46152_miR530:micropc
Length = 134
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatctt 48
||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatctt 20
>45910_miR530:micropc
Length = 134
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 tgcatttgcacctgcatctt 48
||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatctt 20
>44837_miR1030:micropc
Length = 109
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 142 ttgaggtgcaggtgcaagtgcagg 165
|||||||||||||||| |||||||
Sbjct: 24 ttgaggtgcaggtgcaggtgcagg 1
