miRNEST 2.0, an integrative microRNA resource :: BLAST
>41510_ptc-MIR530b:mirbase
Length = 172
Score = 264 bits (133), Expect = 2e-71
Identities = 165/173 (95%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 10 gccaatatgttgcctt-atctgcatttgcacctgcatcttatgcgttggtttcgtttttg 68
|||||||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 1 gccaatatgttgcctttatctgcatttgcacctgcatcttttgcgtttgttttgtttttg 60
Query: 69 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaatggacatatggaaa 128
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 61 actccacaaacaaaatcaagttctgtcgatacagtatgtgggacaat-tagatatggaaa 119
Query: 129 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccatgttggt 181
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 120 ctaataagcttagttgaggtgcaggtgcaagtgcaggtgaatgccattttggt 172
>41509_ptc-MIR530a:mirbase
Length = 144
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 142 ttgaggtgcaggtgcaagtgcaggtgaatgccatgttggt 181
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgccatgttggt 144
Score = 50.1 bits (25), Expect = 6e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 10 gccaatatgttgcctt-atctgcatttgcacctgcatctta 49
||||| |||||||||| ||||||||||||||||||| ||||
Sbjct: 1 gccaacatgttgcctttatctgcatttgcacctgcacctta 41
>41263_csi-MIR530b:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 ttatctgcatttgcacctgcatctt 48
|||||||||||||||||||||||||
Sbjct: 6 ttatctgcatttgcacctgcatctt 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 145 aggtgcaggtgcaagtgcaggtgaatgcc 173
|||||||| ||||||||||| ||||||||
Sbjct: 126 aggtgcagttgcaagtgcagatgaatgcc 154
>41205_aqc-MIR530:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 27 tctgcatttgcacctgcatct 47
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
>41158_tcc-MIR530b:mirbase
Length = 178
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 ttatctgcatttgcacctgca 44
|||||||||||||||||||||
Sbjct: 16 ttatctgcatttgcacctgca 36
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 144 gaggtgcaggtgcaagtgcaggtgaatgccatgttgg 180
|||||||||| ||| |||||||||||||||| ||||
Sbjct: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
>41157_tcc-MIR530a:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 24 ttatctgcatttgcacctgca 44
|||||||||||||||||||||
Sbjct: 16 ttatctgcatttgcacctgca 36
