miRNEST 2.0, an integrative microRNA resource :: BLAST
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 75.8 bits (38), Expect = 7e-15
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 85 aataacttgccaaaggagagttgccctgtggctgctttagcttaat 130
|||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 82 aatatcttgccaaaggagagttgccctgttgctgctttagcttaat 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 taagcaaaccagttatagggc 27
|||||||||||||||||||||
Sbjct: 22 taagcaaaccagttatagggc 42
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 77 tcagtggcaataacttgccaaaggagagttgccctgtggct 117
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 39 tcagtgccaataacttgccaaaggagagttgccctgtggct 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 atagggcacctctctcctggca 42
||||||||||||||||||||||
Sbjct: 5 atagggcacctctctcctggca 26
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 77 tcagtggcaataacttgccaaaggagagttgccctgtggct 117
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 39 tcagtgccaataacttgccaaaggagagttgccctgtggct 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 atagggcacctctctcctggca 42
||||||||||||||||||||||
Sbjct: 5 atagggcacctctctcctggca 26
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 89 acttgccaaaggagagttgccctgtggctgctt 121
|||||||||||||||||||||||||| ||||||
Sbjct: 84 acttgccaaaggagagttgccctgtgactgctt 116
>41249_csi-MIR399d:mirbase
Length = 130
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctgtggctgctt 121
||||||||||||||||||||||| ||||||
Sbjct: 100 tgccaaaggagagttgccctgtgactgctt 129
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 89 acttgccaaaggagagttgccctgtg 114
||||||||||||||||||||||||||
Sbjct: 114 acttgccaaaggagagttgccctgtg 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 taagcaaaccagttatagggcacctctc 34
||||||||||||| | ||||||||||||
Sbjct: 6 taagcaaaccagtcaaagggcacctctc 33
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 84 caataacttgccaaaggagagttgccctgt 113
|||||||| |||||||||||||||||||||
Sbjct: 88 caataactcgccaaaggagagttgccctgt 117
>40383_rco-MIR399a:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cttgccaaaggagagttgccctgtg 114
|||||||||||||||||||||||||
Sbjct: 66 cttgccaaaggagagttgccctgtg 90
>40094_ath-MIR399c:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 acttgccaaaggagagttgccctgt 113
|||||||||||||||||||||||||
Sbjct: 81 acttgccaaaggagagttgccctgt 105
>39886_aly-MIR399c:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 acttgccaaaggagagttgccctgt 113
|||||||||||||||||||||||||
Sbjct: 86 acttgccaaaggagagttgccctgt 110
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctgtg 114
|||||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccctgtg 74
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctgt 113
||||||||||||||||||||||
Sbjct: 85 tgccaaaggagagttgccctgt 106
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctgt 113
||||||||||||||||||||||
Sbjct: 82 tgccaaaggagagttgccctgt 103
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 gccaaaggagagttgccctgtg 114
||||||||||||||||||||||
Sbjct: 93 gccaaaggagagttgccctgtg 114
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 cttgccaaaggagagttgccct 111
||||||||||||||||||||||
Sbjct: 77 cttgccaaaggagagttgccct 98
>40732_mtr-MIR399b:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 acttgccaaaggagagttgccctgtg 114
|||||||||||||||| |||||||||
Sbjct: 70 acttgccaaaggagagctgccctgtg 95
>42828_zma-MIR399j:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctg 112
|||||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccctg 174
>42827_zma-MIR399i:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctg 112
|||||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccctg 90
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctg 112
|||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccctg 186
>42044_osa-MIR399d:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctg 112
|||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccctg 276
>41455_ptc-MIR399h:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 90 cttgccaaaggagagttgccctgtg 114
||||||||||||||||| |||||||
Sbjct: 101 cttgccaaaggagagtttccctgtg 125
>40386_rco-MIR399d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 90 cttgccaaaggagagttgccctgtg 114
||||||||||||||| |||||||||
Sbjct: 76 cttgccaaaggagagctgccctgtg 100
>40093_ath-MIR399b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctg 112
|||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccctg 125
>39885_aly-MIR399b:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccctg 112
|||||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccctg 126
>42050_osa-MIR399j:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccct 111
||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccct 95
>41548_sly-MIR399:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccct 111
||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccct 70
>41247_csi-MIR399b:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccct 111
||||||||||||||||||||
Sbjct: 125 tgccaaaggagagttgccct 144
>41192_aqc-MIR399:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 tgccaaaggagagttgccct 111
||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccct 91
>40745_mtr-MIR399o:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 89 acttgccaaaggagagttgccctg 112
|||||||||||||||| |||||||
Sbjct: 64 acttgccaaaggagagctgccctg 87
