miRNEST 2.0, an integrative microRNA resource :: BLAST
>40448_gma-MIR168:mirbase
Length = 125
Score = 182 bits (92), Expect = 4e-47
Identities = 116/124 (93%)
Strand = Plus / Plus
Query: 8 cactgtgcggtctctaattcgcttggtgcaggtcgggaacctgtttttgcgcgaaatggt 67
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1 cactgtgcggtctctaattcgcttggtgcaggtcgggaaccggttttcgcgcggaatgga 60
Query: 68 ggagtggttgccggcggcgaattggatcccgccttgcatcaactgaatcggaggccgcag 127
|||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 ggagcggtcgccggcgccgaattggatcccgccttgcatcaactgaatcggaggccgcgg 120
Query: 128 tgaa 131
||||
Sbjct: 121 tgaa 124
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 84 gcgaattggatcccgccttgcatcaactgaatcggagg 121
||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactgaatcggagg 160
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>41101_tcc-MIR168:mirbase
Length = 167
Score = 75.8 bits (38), Expect = 8e-15
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 85 cgaattggatcccgccttgcatcaactgaatcggaggccgcagtga 130
|||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtga 162
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||||
Sbjct: 9 gcggtctctaattcgcttggtgcaggtcgggaac 42
>41215_crt-MIR168:mirbase
Length = 201
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 84 gcgaattggatcccgccttgcatcaactgaatcggag 120
|||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggag 168
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||||
Sbjct: 9 gcggtctctaattcgcttggtgcaggtcgggaac 42
>41210_ccl-MIR168:mirbase
Length = 176
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 84 gcgaattggatcccgccttgcatcaactgaatcggag 120
|||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggag 167
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||||
Sbjct: 8 gcggtctctaattcgcttggtgcaggtcgggaac 41
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 86 gaattggatcccgccttgcatcaactgaatcggag 120
|||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
>41596_vvi-MIR168:mirbase
Length = 132
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaacc 48
|||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaacc 33
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 92 gatcccgccttgcatcaactgaatcggag 120
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
>40355_rco-MIR168:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 86 gaattggatcccgccttgcatcaactgaatcg 117
||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcg 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 ctaattcgcttggtgcaggtcgggaac 47
|||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaac 27
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 88 attggatcccgccttgcatcaactgaatcgga 119
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 attcgcttggtgcaggtcgggaacc 48
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 88 attggatcccgccttgcatcaactgaatcgga 119
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 attcgcttggtgcaggtcgggaacc 48
|||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>40044_ath-MIR168b:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctcggattcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
|||||||| ||||||||||||||||||||||||
Sbjct: 31 gcggtctcggattcgcttggtgcaggtcgggaac 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 92 gatcccgccttgcatcaactgaatcggag 120
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 91 ggatcccgccttgcatcaactgaatcggag 120
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
>40271_bna-MIR168:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
