miRNEST 2.0, an integrative microRNA resource :: BLAST
>40367_rco-MIR319a:mirbase
Length = 211
Score = 127 bits (64), Expect = 4e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 134 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 193
|||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 133 cagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggact 192
Query: 194 gaagggagctcccttt 209
||||||||||||||||
Sbjct: 193 gaagggagctcccttt 208
Score = 105 bits (53), Expect = 1e-23
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 11 aagagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactca 70
||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||
Sbjct: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
Query: 71 ttcatccaaatgctgag 87
||||||||||| |||||
Sbjct: 63 ttcatccaaatactgag 79
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 119 bits (60), Expect = 9e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 134 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 193
|||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 107 cagtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttcctgtacttggact 166
Query: 194 gaagggagctcccttt 209
||||||||||||||||
Sbjct: 167 gaagggagctcccttt 182
Score = 105 bits (53), Expect = 1e-23
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 11 aagagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactca 70
||||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactca 68
Query: 71 ttcatccaaatgctgag 87
||||||||||| |||||
Sbjct: 69 ttcatccaaatactgag 85
>40464_gma-MIR319a:mirbase
Length = 207
Score = 115 bits (58), Expect = 1e-26
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 141 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 200
||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggga 182
Query: 201 gctccctttt 210
||||||||||
Sbjct: 183 gctccctttt 192
Score = 105 bits (53), Expect = 1e-23
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 11 aagagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactca 70
||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||
Sbjct: 19 aagagagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactca 78
Query: 71 ttcatccaaatgctgag 87
|||||||||||| ||||
Sbjct: 79 ttcatccaaatgttgag 95
>41282_ctr-MIR319:mirbase
Length = 186
Score = 113 bits (57), Expect = 6e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 134 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 193
|||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||
Sbjct: 104 cagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtgcttggact 163
Query: 194 gaagggagctccc 206
|||||||||||||
Sbjct: 164 gaagggagctccc 176
Score = 69.9 bits (35), Expect = 8e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 15 gagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcattca 74
||||||||||| ||||| |||||||||| ||||||| |||||||| | ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 75 tccaaat 81
|||||||
Sbjct: 70 tccaaat 76
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 111 bits (56), Expect = 2e-25
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 10 gaagagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactc 69
|||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||
Sbjct: 8 gaagagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactc 67
Query: 70 attcatccaaat 81
||||||||||||
Sbjct: 68 attcatccaaat 79
Score = 109 bits (55), Expect = 9e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 134 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 193
|||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 98 cagtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggact 157
Query: 194 gaagggagctccctt 208
|||||||||||||||
Sbjct: 158 gaagggagctccctt 172
>40465_gma-MIR319b:mirbase
Length = 208
Score = 111 bits (56), Expect = 2e-25
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 132 ctcagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttgga 191
||||| || ||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 115 ctcagcaaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttgga 174
Query: 192 ctgaagggagctcccttttt 211
||||||||||||||||||||
Sbjct: 175 ctgaagggagctcccttttt 194
Score = 83.8 bits (42), Expect = 5e-17
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 aagagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactc 69
||||||||||||||||||||| ||||||| || || |||| ||||||||| |||||||
Sbjct: 19 aagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactc 78
Query: 70 attcatccaaatgctgag 87
||||||||||||||||||
Sbjct: 79 attcatccaaatgctgag 96
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 107 bits (54), Expect = 4e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 141 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 200
||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||
Sbjct: 110 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaaggga 169
Query: 201 gctccctttt 210
||||||||||
Sbjct: 170 gctccctttt 179
Score = 67.9 bits (34), Expect = 3e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 aagagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactc 69
|||||||||||||| |||||| |||||||| || || |||| ||||||||| | |||||
Sbjct: 2 aagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactc 61
Query: 70 attcatccaaatgctgag 87
||||||||||||| ||||
Sbjct: 62 attcatccaaatgttgag 79
>41544_sly-MIR319:mirbase
Length = 168
Score = 93.7 bits (47), Expect = 5e-20
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 132 ctcagtaactgagtgaatgatgcgggag-acaagttggatcttaagcttcctgtacttgg 190
||||| |||||||||||||| ||||||| |||||||| |||| ||||||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 191 actgaagggagctcc 205
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 46 taggattcaattagcttccgactcattcatccaaatgctgag 87
|||| ||||||| ||| |||||||||||||||||||| ||||
Sbjct: 31 tagggttcaatttgctgccgactcattcatccaaatgttgag 72
>41185_aqc-MIR319:mirbase
Length = 177
Score = 79.8 bits (40), Expect = 8e-16
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 136 gtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactga 195
|||| ||| |||||||| ||||||| | |||||||||| ||||| ||||||||||||||
Sbjct: 104 gtaaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactga 163
Query: 196 agggagctccct 207
||||||||||||
Sbjct: 164 agggagctccct 175
Score = 54.0 bits (27), Expect = 5e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 12 agagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcat 71
|||||||| ||||||||||| ||| ||| | ||| ||||||||| ||| |||||||||
Sbjct: 1 agagagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcat 60
Query: 72 tcatcca 78
|||||||
Sbjct: 61 tcatcca 67
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 71.9 bits (36), Expect = 2e-13
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 134 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 193
|||||| ||| ||| ||||||||||||||| || ||||||| |||||| | |||||||
Sbjct: 104 cagtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggact 163
Query: 194 gaagggagctcccttt 209
||||||||||||||||
Sbjct: 164 gaagggagctcccttt 179
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 49 gattcaattagcttccgactcattcatccaaatgctgag 87
|||| |||||| | ||||||||||||||||||| |||||
Sbjct: 47 gatttaattagttaccgactcattcatccaaatactgag 85
>40069_ath-MIR319a:mirbase
Length = 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 49 gattcaattagcttccgactcattcatccaaat 81
|||||||||||||||||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 187 ttggactgaagggagctccct 207
|||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174
>39858_aly-MIR319a:mirbase
Length = 221
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 53 caattagcttccgactcattcatccaaat 81
|||||||||||||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 187 ttggactgaagggagctccct 207
|||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccct 197
>40703_mtr-MIR319:mirbase
Length = 207
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctcccttttt 211
||||||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcccttttt 193
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 181 ctgtacttggactgaagggagctcccttt 209
|||| ||||||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctcccttt 187
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 181 ctgtacttggactgaagggagctcccttt 209
|||| ||||||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctcccttt 190
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagagagctttcttcagtcca 31
|||||||||||||||||||||
Sbjct: 9 aagagagctttcttcagtcca 29
>40369_rco-MIR319c:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 181 ctgtacttggactgaagggagctcccttt 209
|||| ||||||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctcccttt 185
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 181 ctgtacttggactgaagggagctccctt 208
|||| |||||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccctt 183
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccctt 208
|||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184
>39740_smo-MIR319:mirbase
Length = 215
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccctt 208
|||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccct 207
||||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccct 204
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccct 207
||||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccct 246
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccct 207
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>40070_ath-MIR319b:mirbase
Length = 172
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccct 207
||||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccct 207
||||||||||||||||||||||
Sbjct: 190 cttggactgaagggagctccct 211
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 ctgtacttggactgaagggagctcc 205
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 ctgtacttggactgaagggagctcc 205
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccc 206
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccc 206
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctccc 206
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>42780_zma-MIR319a:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 187 ttggactgaagggagctccctttt 210
||||||||||||| ||||||||||
Sbjct: 171 ttggactgaagggtgctccctttt 194
>41994_osa-MIR319a:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 aagaagagagctttcttcagtcca 31
|||||||||||| |||||||||||
Sbjct: 6 aagaagagagctctcttcagtcca 29
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 187 ttggactgaagggagctccc 206
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctcc 205
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctcc 205
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 186 cttggactgaagggagctcc 205
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
