miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 20 cggcggtctctaattcgcttggtgcaggtcgggaact 56
|||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaact 43
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcccgcggtga 151
||||||||||||||||||||||||||| ||| |||||
Sbjct: 142 tcccgccttgcatcaactgaatcggagaccgaggtga 178
>41210_ccl-MIR168:mirbase
Length = 176
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 20 cggcggtctctaattcgcttggtgcaggtcgggaact 56
|||||||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaact 42
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcccgcggtg 150
||||||||||||||||||||||||||| ||| ||||
Sbjct: 141 tcccgccttgcatcaactgaatcggagaccgaggtg 176
>41101_tcc-MIR168:mirbase
Length = 167
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 20 cggcggtctctaattcgcttggtgcaggtcgggaact 56
|||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaact 43
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcccgcggtga 151
||||||||||||||||||||||||||| |||||||||
Sbjct: 126 tcccgccttgcatcaactgaatcggagaccgcggtga 162
>40448_gma-MIR168:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 22 gcggtctctaattcgcttggtgcaggtcgggaac 55
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcccgcggtgaa 152
||||||||||||||||||||||||||| ||||||||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 65.9 bits (33), Expect = 9e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 24 ggtctctaattcgcttggtgcaggtcgggaact 56
|||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaact 33
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggag 141
|||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggag 135
>41596_vvi-MIR168:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 24 ggtctctaattcgcttggtgcaggtcgggaac 55
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggag 141
|||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 24 ggtctctaattcgcttggtgcaggtcgggaact 56
||||||| |||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaact 33
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggag 141
|||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159
>40044_ath-MIR168b:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 20 cggcggtctctaattcgcttggtgcaggtcgggaact 56
|||||||||| |||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaact 41
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 112 agctcccgccttgcatcaactgaatcggagcccgcggtga 151
|||||||| |||| |||||||||||||||| ||| |||||
Sbjct: 85 agctcccgtcttgtatcaactgaatcggagtccgaggtga 124
>39833_aly-MIR168b:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 20 cggcggtctctaattcgcttggtgcaggtcgggaact 56
|||||||||| |||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaact 65
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcccgcggtgaa 152
||||| |||| |||||||||||||||| ||| ||||||
Sbjct: 112 tcccgtcttgtatcaactgaatcggagtccgaggtgaa 149
>40355_rco-MIR168:mirbase
Length = 131
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 ctaattcgcttggtgcaggtcgggaact 56
||||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaact 28
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcg 138
||||||||||||||||||||||||
Sbjct: 105 tcccgccttgcatcaactgaatcg 128
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcgga 140
||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcgggaac 55
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcgga 140
||||||||||||||||||||||||||
Sbjct: 108 tcccgccttgcatcaactgaatcgga 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcgggaac 55
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>42742_zma-MIR168b:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>40271_bna-MIR168:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 20 cggcggtctctaattcgcttggtgcaggtcgggaact 56
|||||| |||| | |||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaact 40
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcccgcgg 148
|||||||||||| ||| |||||||||||| ||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagccggcgg 99
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 63 tcccgccttgcaccaagtgaatcggagcc 91
>42460_sof-MIR168b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>42459_sof-MIR168a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>41962_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41961_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41888_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41887_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41753_bdi-MIR168:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 tcccgccttgcatcaactgaatcggagcc 143
|||||||||||| ||| ||||||||||||
Sbjct: 78 tcccgccttgcaccaagtgaatcggagcc 106
