miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>44836_miR394:micropc
Length = 81
Score = 113 bits (57), Expect = 4e-26
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccactattttttgacccnnnnnnnngaagaaatctattatgg 102
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ttggcattctgtccacctccactattttttgacccaaaaaaaagaagaaatctattatgg 60
Query: 103 tagaggtgggcatactgccaa 123
|||||||||||||||||||||
Sbjct: 61 tagaggtgggcatactgccaa 81
>45941_miR394:micropc
Length = 79
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccact 65
|||||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctccact 23
>45351_miR394:micropc
Length = 79
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccact 65
|||||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctccact 23
>46325_miR394:micropc
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcca 63
|||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctcca 21
>46705_miR394:micropc
Length = 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 tggcattctgtccacctcca 63
||||||||||||||||||||
Sbjct: 1 tggcattctgtccacctcca 20
>46238_miR394:micropc
Length = 76
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctcc 20
>45291_miR394:micropc
Length = 71
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctcc 20
>45025_miR394:micropc
Length = 85
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctcc 20
