miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>32390_mmu-mir-1195:mirbase
          Length = 123

 Score = 85.7 bits (43), Expect = 5e-18
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                      
Query: 3  agaggcaggcagatctctgtgagttcaaggccagcctggtctacagagtgagttccagga 62
          |||||||||||||||||||||||||| ||||||||||| || ||||| ||||||| ||| 
Sbjct: 2  agaggcaggcagatctctgtgagttcgaggccagcctgctcaacagaatgagttctaggg 61

                                         
Query: 63 tggccagggctacatagagaaaccctgtctc 93
            ||||||   ||| ||||||||||||||||
Sbjct: 62 cagccaggaacacacagagaaaccctgtctc 92




>32574_mmu-mir-3470b:mirbase
          Length = 126

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                      
Query: 22 tgagttcaaggccagcctggtctacagagtgagttccaggatggccagggctacatagag 81
          |||||||||||||||||||||||||||||||||| ||||||  |||| ||||||| ||||
Sbjct: 65 tgagttcaaggccagcctggtctacagagtgagtgccaggacagccaaggctacacagag 6

            
Query: 82 aa 83
          ||
Sbjct: 5  aa 4




>32573_mmu-mir-3470a:mirbase
          Length = 77

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                
Query: 2  cagaggcaggcagatctctgtgagttcaaggccagcctggtctacagagtgagt 55
          ||||||||||| ||||||||||| || ||||||||||||||||||| |||||||
Sbjct: 59 cagaggcaggctgatctctgtgaatttaaggccagcctggtctacaaagtgagt 6




>32440_mmu-mir-1935:mirbase
          Length = 60

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 47/52 (90%), Gaps = 2/52 (3%)
 Strand = Plus / Plus

                                                              
Query: 2  cagaggcaggcagatctctgtgagttcaaggccagcctggtctacagagtga 53
          ||||||| ||| ||||||||  ||||| ||||||||||||||||||||||||
Sbjct: 11 cagaggctggcggatctctg--agttcgaggccagcctggtctacagagtga 60




>32599_mmu-mir-5098:mirbase
          Length = 82

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 65 gccagggctacatagagaaaccctgtctc 93
          |||||||||||| ||||||||||||||||
Sbjct: 78 gccagggctacacagagaaaccctgtctc 50




>32391_mmu-mir-1196:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                              
Query: 2  cagaggcaggcagatctctgtgagttcaaggccagc 37
          |||||||||| |||| |||||||||||||| |||||
Sbjct: 37 cagaggcaggtagatttctgtgagttcaagaccagc 2




>32458_mmu-mir-1954:mirbase
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                             
Query: 59 aggatggccagggctacatagagaaaccctgtctc 93
          ||||| |||||||||||| |||||||||| |||||
Sbjct: 85 aggatagccagggctacacagagaaaccccgtctc 51