miRNEST 2.0, an integrative microRNA resource :: BLAST
>40448_gma-MIR168:mirbase
Length = 125
Score = 77.8 bits (39), Expect = 2e-15
Identities = 94/109 (86%), Gaps = 5/109 (4%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcgggcaccaatcttcccgcgcgtaatggatg--ccgt 58
||||||||||||||||||||||||||| ||| | ||| ||||| |||||| | | ||
Sbjct: 11 tctctaattcgcttggtgcaggtcgggaaccggttttc--gcgcggaatggaggagcggt 68
Query: 59 tggcggcggcgaatttggatcccgccttgcatcaactgaatcggaggcc 107
| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 69 cgccggcgccgaatt-ggatcccgccttgcatcaactgaatcggaggcc 116
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcggagg 105
|||||||||||||||||||||||||||||||||
Sbjct: 128 ttggatcccgccttgcatcaactgaatcggagg 160
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcggg 27
||||| |||||||||||||||||||||
Sbjct: 3 tctctgattcgcttggtgcaggtcggg 29
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcggag 104
||||||||||||||||||||||||||||||||
Sbjct: 104 ttggatcccgccttgcatcaactgaatcggag 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcggg 27
|||||||||||||||||||||||||||
Sbjct: 3 tctctaattcgcttggtgcaggtcggg 29
>41215_crt-MIR168:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcggag 104
||||||||||||||||||||||||||||||||
Sbjct: 137 ttggatcccgccttgcatcaactgaatcggag 168
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcggg 27
|||||||||||||||||||||||||||
Sbjct: 13 tctctaattcgcttggtgcaggtcggg 39
>41210_ccl-MIR168:mirbase
Length = 176
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcggag 104
||||||||||||||||||||||||||||||||
Sbjct: 136 ttggatcccgccttgcatcaactgaatcggag 167
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcggg 27
|||||||||||||||||||||||||||
Sbjct: 12 tctctaattcgcttggtgcaggtcggg 38
>41101_tcc-MIR168:mirbase
Length = 167
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcggag 104
||||||||||||||||||||||||||||||||
Sbjct: 121 ttggatcccgccttgcatcaactgaatcggag 152
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcggg 27
|||||||||||||||||||||||||||
Sbjct: 13 tctctaattcgcttggtgcaggtcggg 39
>40043_ath-MIR168a:mirbase
Length = 138
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcgga 103
|||||||||||||||||||||||||||||||
Sbjct: 97 ttggatcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 attcgcttggtgcaggtcgggcaccaat 34
||||||||||||||||||||| ||||||
Sbjct: 16 attcgcttggtgcaggtcgggaaccaat 43
>39832_aly-MIR168a:mirbase
Length = 155
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcgga 103
|||||||||||||||||||||||||||||||
Sbjct: 103 ttggatcccgccttgcatcaactgaatcgga 133
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 attcgcttggtgcaggtcgggcaccaat 34
||||||||||||||||||||| ||||||
Sbjct: 22 attcgcttggtgcaggtcgggaaccaat 49
>41596_vvi-MIR168:mirbase
Length = 132
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 67 gcgaatttggatcccgccttgcatcaactgaatcggag 104
||||||| |||||||||||||||||||||||||||||
Sbjct: 90 gcgaattccgatcccgccttgcatcaactgaatcggag 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tctctaattcgcttggtgcaggtcggg 27
|||||||||||||||||||||||||||
Sbjct: 3 tctctaattcgcttggtgcaggtcggg 29
>40355_rco-MIR168:mirbase
Length = 131
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 73 ttggatcccgccttgcatcaactgaatcg 101
|||||||||||||||||||||||||||||
Sbjct: 100 ttggatcccgccttgcatcaactgaatcg 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 ctaattcgcttggtgcaggtcggg 27
||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcggg 24
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 ggatcccgccttgcatcaactgaatcggag 104
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
>40044_ath-MIR168b:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 attcgcttggtgcaggtcggg 27
|||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggg 37
>39833_aly-MIR168b:mirbase
Length = 176
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 attcgcttggtgcaggtcggg 27
|||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcggg 61
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 76 gatcccgccttgcatcaactgaatcggag 104
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
