miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42645_tae-MIR398:mirbase
          Length = 120

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 50  gtgttctcaggtcgcccccgctg 72
           |||||||||||||||||||||||
Sbjct: 86  gtgttctcaggtcgcccccgctg 108




>42817_zma-MIR398a:mirbase
          Length = 140

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  gtgttctcaggtcgcccccgc 70
           |||||||||||||||||||||
Sbjct: 120 gtgttctcaggtcgcccccgc 140




>42588_sbi-MIR398:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  gtgttctcaggtcgcccccgc 70
           |||||||||||||||||||||
Sbjct: 89  gtgttctcaggtcgcccccgc 109




>40730_mtr-MIR398c:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 50 gtgttctcaggtcgcccccgctgaa 74
          |||||||||||||||||| ||||||
Sbjct: 63 gtgttctcaggtcgcccctgctgaa 87




>40729_mtr-MIR398b:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 50 gtgttctcaggtcgcccccgctgaa 74
          |||||||||||||||||| ||||||
Sbjct: 63 gtgttctcaggtcgcccctgctgaa 87




>42818_zma-MIR398b:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  gtgttctcaggtcgcccccg 69
           ||||||||||||||||||||
Sbjct: 88  gtgttctcaggtcgcccccg 107




>40382_rco-MIR398b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 44  tttcacgtgttctcaggtcgcccc 67
           ||||| ||||||||||||||||||
Sbjct: 96  tttcatgtgttctcaggtcgcccc 119




>41667_vvi-MIR398c:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 50 gtgttctcaggtcgcccccgctg 72
          |||||||||||||||||| ||||
Sbjct: 59 gtgttctcaggtcgcccctgctg 81




>41666_vvi-MIR398b:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 50 gtgttctcaggtcgcccccgctg 72
          |||||||||||||||||| ||||
Sbjct: 59 gtgttctcaggtcgcccctgctg 81




>41446_ptc-MIR398b:mirbase
          Length = 85

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 45 ttcacgtgttctcaggtcgcccc 67
          |||| ||||||||||||||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccc 74




>40090_ath-MIR398b:mirbase
          Length = 116

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 43  ttttcacgtgttctcaggtcgcccccgctga 73
           |||||| ||||||||||||| |||| |||||
Sbjct: 80  ttttcatgtgttctcaggtcacccctgctga 110