miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54744_tae-miR2025:pmrd
          Length = 96

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 gtgttctcaggtcgcccccgctg 72
          |||||||||||||||||||||||
Sbjct: 72 gtgttctcaggtcgcccccgctg 94




>55089_zma-miR398b:pmrd
          Length = 142

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  gtgttctcaggtcgcccccgc 70
           |||||||||||||||||||||
Sbjct: 122 gtgttctcaggtcgcccccgc 142




>55088_zma-miR398a:pmrd
          Length = 142

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 50 gtgttctcaggtcgcccccgc 70
          |||||||||||||||||||||
Sbjct: 21 gtgttctcaggtcgcccccgc 1




>55090_zma-miR398c:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  gtgttctcaggtcgcccccg 69
           ||||||||||||||||||||
Sbjct: 89  gtgttctcaggtcgcccccg 108




>54876_vvi-miR398c:pmrd
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 50 gtgttctcaggtcgcccccgctg 72
          |||||||||||||||||| ||||
Sbjct: 59 gtgttctcaggtcgcccctgctg 81




>54875_vvi-miR398b:pmrd
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 50 gtgttctcaggtcgcccccgctg 72
          |||||||||||||||||| ||||
Sbjct: 59 gtgttctcaggtcgcccctgctg 81




>51745_ptc-miR398b:pmrd
          Length = 85

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 45 ttcacgtgttctcaggtcgcccc 67
          |||| ||||||||||||||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccc 74




>47013_ath-miR398b:pmrd
          Length = 116

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 43  ttttcacgtgttctcaggtcgcccccgctga 73
           |||||| ||||||||||||| |||| |||||
Sbjct: 80  ttttcatgtgttctcaggtcacccctgctga 110