miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q923G2|RPAB3_MOUSE DNA-directed RNA polymerases I, II, and III
subunit RPABC3 OS=Mus musculus GN=Polr2h PE=2 SV=3
Length = 150
Score = 57.8 bits (138), Expect = 2e-08
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 2 YGGLLMRLQGDANNLQGFMMDTNVYLLIKKIAF 100
YGGLLMRLQGDANNL GF +D+ VYLL+KK+AF
Sbjct: 118 YGGLLMRLQGDANNLHGFEVDSRVYLLMKKLAF 150
>sp|P52434|RPAB3_HUMAN DNA-directed RNA polymerases I, II, and III
subunit RPABC3 OS=Homo sapiens GN=POLR2H PE=1 SV=4
Length = 150
Score = 57.8 bits (138), Expect = 2e-08
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 2 YGGLLMRLQGDANNLQGFMMDTNVYLLIKKIAF 100
YGGLLMRLQGDANNL GF +D+ VYLL+KK+AF
Sbjct: 118 YGGLLMRLQGDANNLHGFEVDSRVYLLMKKLAF 150
>sp|Q19826|RPAB3_CAEEL Probable DNA-directed RNA polymerases I, II,
and III subunit RPABC3 OS=Caenorhabditis elegans
GN=rpb-8 PE=1 SV=1
Length = 148
Score = 46.6 bits (109), Expect = 5e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 2 YGGLLMRLQGDANNLQGFMMDTNVYLLIKKIAF 100
+GGLLMRL+G+A NL GF +D N+YLL+KK F
Sbjct: 116 FGGLLMRLKGEAINLHGFEVDMNLYLLMKKTDF 148
>sp|A8XT81|RPAB3_CAEBR Probable DNA-directed RNA polymerases I, II,
and III subunit RPABC3 OS=Caenorhabditis briggsae
GN=rpb-8 PE=3 SV=1
Length = 148
Score = 46.6 bits (109), Expect = 5e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 2 YGGLLMRLQGDANNLQGFMMDTNVYLLIKKIAF 100
+GGLLMRL+G+A NL GF +D N+YLL+KK F
Sbjct: 116 FGGLLMRLKGEAINLHGFEVDMNLYLLMKKTDF 148
