miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q8TEB9|RHBD1_HUMAN Rhomboid domain-containing protein 1 OS=Homo
sapiens GN=RHBDD1 PE=2 SV=1
Length = 315
Score = 63.5 bits (153), Expect = 4e-10
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +2
Query: 11 VLNICVPNYIASWVELVLIYLIAPGTSLIGHLAGILVGLLYTVXPL 148
+L VPN A WVELV I+L +PGTS GHLAGILVGL+YT PL
Sbjct: 165 ILGFPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPL 210
>sp|Q5RBS4|RHBD1_PONAB Rhomboid domain-containing protein 1 OS=Pongo
abelii GN=RHBDD1 PE=2 SV=1
Length = 318
Score = 61.2 bits (147), Expect = 2e-09
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = +2
Query: 11 VLNICVPNYIASWVELVLIYLIAPGTSLIGHLAGILVGLLYTVXPL 148
+L VPN A WVELV I+L +PGTS GH AGILVGL+YT PL
Sbjct: 165 ILGFPVPNRFACWVELVAIHLFSPGTSFAGHQAGILVGLMYTQGPL 210
>sp|Q8BHC7|RHBD1_MOUSE Rhomboid domain-containing protein 1 OS=Mus
musculus GN=Rhbdd1 PE=2 SV=1
Length = 315
Score = 59.7 bits (143), Expect = 6e-09
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +2
Query: 11 VLNICVPNYIASWVELVLIYLIAPGTSLIGHLAGILVGLLYTVXPL 148
+L VPN A W ELV I+ PGTS GHLAGILVGL+YT PL
Sbjct: 165 ILGFPVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPL 210
>sp|Q4V8F3|RHBD1_RAT Rhomboid domain-containing protein 1 OS=Rattus
norvegicus GN=Rhbdd1 PE=2 SV=1
Length = 316
Score = 58.2 bits (139), Expect = 2e-08
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = +2
Query: 11 VLNICVPNYIASWVELVLIYLIAPGTSLIGHLAGILVGLLYTVXPL 148
+L VPN A W EL I+ PGTS GHLAGILVGL+YT PL
Sbjct: 165 ILGFPVPNRFACWAELAAIHFCTPGTSFAGHLAGILVGLMYTQGPL 210
>sp|Q8RXW0|Y3761_ARATH Uncharacterized protein At3g17611
OS=Arabidopsis thaliana GN=At3g17611 PE=2 SV=1
Length = 334
Score = 47.8 bits (112), Expect = 2e-05
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 11 VLNICVPNYIASWVELVLIYLIAPGTSLIGHLAGILVGLLY 133
V I VP A+W EL+L+ + P S +GHL GIL G++Y
Sbjct: 176 VYGILVPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 216
