miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;ABGA01067256.1/4913-4635 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 97.6 bits (49), Expect = 2e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 215 ttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagcgagactctgt 274
Query: 61 ctcaa 65
|||||
Sbjct: 275 ctcaa 279
>RF00017;Metazoa_SRP;AACZ02130640.1/1563-1266 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 89.7 bits (45), Expect = 4e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||||||||||| |||||| | |||||||||||||||||||||||||||| ||
Sbjct: 217 ttgcagtgagttgagatcgtgccacagcgctccagcctgggcgacagagcaagactctgt 276
Query: 61 ctcaa 65
|||||
Sbjct: 277 ctcaa 281
>RF00017;Metazoa_SRP;AACZ02123884.1/7542-7262 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 89.7 bits (45), Expect = 4e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| ||
Sbjct: 217 ttgcagtgagttgagatcgtgccactgcgctccagcctgggcaacagagcaagactctgt 276
Query: 61 ctcaa 65
|||||
Sbjct: 277 ctcaa 281
>RF00017;Metazoa_SRP;AADB02008084.1/44190-43904 9606:Homo sapiens
(human)
Length = 287
Score = 89.7 bits (45), Expect = 4e-18
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 223 ttgcagtgagcggagatcgcgccactgtactccagcctgggcgacagagcaagactctgt 282
Query: 61 ctcaa 65
|||||
Sbjct: 283 ctcaa 287
>RF00017;Metazoa_SRP;ABGA01141136.1/2459-2170 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 87.7 bits (44), Expect = 2e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||| ||
Sbjct: 84 ttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcgagactccgt 143
Query: 61 ctcaaaaa 68
|| |||||
Sbjct: 144 ctaaaaaa 151
>RF00017;Metazoa_SRP;AACZ02008236.1/6095-6390 9598:Pan troglodytes
(chimpanzee)
Length = 296
Score = 87.7 bits (44), Expect = 2e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| |||||||| |||||||||| |||||||||||||||||| ||
Sbjct: 84 ttgcagtgagctgagatcgtgccactgcactccagcct-ggcgacagagcaagactccgt 142
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 143 ctcaaaaa 150
>RF00017;Metazoa_SRP;ABGA01391766.1/7562-7278 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 83.8 bits (42), Expect = 2e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 12 tgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||||| ||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 232 tgagatcacgccactgcactccagcctgggcgacagagcaagactccgtctcaa 285
>RF00017;Metazoa_SRP;AADC01009840.1/7346-7628 9606:Homo sapiens
(human)
Length = 283
Score = 83.8 bits (42), Expect = 2e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 12 tgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 230 tgagatcgcgccactgtactccagcctgggcgacagagcaagactctgtctcaa 283
>RF00017;Metazoa_SRP;ABGA01209199.1/33151-32869 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 81.8 bits (41), Expect = 1e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| ||||| || |||||||||||||| |||||||||||||| ||
Sbjct: 219 ttgcagtgagctgagatcgtgccattgcactccagcctgggcaacagagcaagactccgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;AADA01313803.1/16287-15985 9598:Pan troglodytes
(chimpanzee)
Length = 303
Score = 81.8 bits (41), Expect = 1e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctc 63
|||||||||||||||||||||||| ||||||| |||||| || ||||||||||| ||||
Sbjct: 222 cagtgagttgagatcatgccactgcactccagtctgggcaacggagcaagactccatctc 281
Query: 64 aaaaa 68
|||||
Sbjct: 282 aaaaa 286
>RF00017;Metazoa_SRP;CABD01014788.1/6794-7076 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 81.8 bits (41), Expect = 1e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| ||||||| |||||||||||||||| ||||| |||||||||||||||
Sbjct: 219 ttgcagtgagctgagatcgtgccactgtactccagtctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AANU01105175.1/9945-9665 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 81.8 bits (41), Expect = 1e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 217 ttgcagtgagccgagatcctgccactgcactccagcctgggcgacagagcaagactc 273
>RF00017;Metazoa_SRP;AACZ02021234.1/28696-28417 9598:Pan troglodytes
(chimpanzee)
Length = 280
Score = 79.8 bits (40), Expect = 4e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
||||| |||| |||||| |||||||| |||||||||||||| |||||||||||||| ||
Sbjct: 84 ttgcattgagctgagattgtgccactgcactccagcctgggcaacagagcaagactccgt 143
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 144 ctcaaaaa 151
>RF00017;Metazoa_SRP;AADC01110475.1/66623-66983 9606:Homo sapiens
(human)
Length = 361
Score = 79.8 bits (40), Expect = 4e-15
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 81 ttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactccgt 140
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 141 ctcaaaaa 148
>RF00017;Metazoa_SRP;ABSL01071688.1/6738-7020 9606:Homo sapiens
(human)
Length = 283
Score = 79.8 bits (40), Expect = 4e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||
Sbjct: 220 tgcagtgagctgagatcgtgccactgcactccagcctgggcgatagagcaagactc 275
>RF00017;Metazoa_SRP;AADC01003362.1/5618-5894 9606:Homo sapiens
(human)
Length = 277
Score = 77.8 bits (39), Expect = 2e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtc 61
||||||||| ||||||||| |||||| ||||||||||||| ||||||||||| | | |||
Sbjct: 84 tgcagtgagctgagatcataccactgcactccagcctgggtgacagagcaagtccctgtc 143
Query: 62 tcaaaaa 68
|||||||
Sbjct: 144 tcaaaaa 150
>RF00017;Metazoa_SRP;AADC01047521.1/166550-166837 9606:Homo sapiens
(human)
Length = 288
Score = 75.8 bits (38), Expect = 6e-14
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 13 gagatcatgccactgtactccagcctgggcgacagagcaagactcggtct 62
||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 236 gagatcatgccactgcactccagcctgggtgacagagcaagactccgtct 285
>RF00017;Metazoa_SRP;ABBA01034472.1/94407-94689 9606:Homo sapiens
(human)
Length = 283
Score = 75.8 bits (38), Expect = 6e-14
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctc 63
||||||| |||||| | || |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 222 cagtgagctgagattacgctactgtactccagcctgggtgacagagcaagactccgtctc 281
Query: 64 aa 65
||
Sbjct: 282 aa 283
>RF00017;Metazoa_SRP;AANU01168065.1/7218-7491 9544:Macaca mulatta
(rhesus monkey)
Length = 274
Score = 75.8 bits (38), Expect = 6e-14
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
|||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 210 ttgcagtgagctgagatcatgccactgcactccagcctgggcgaca 255
>RF00017;Metazoa_SRP;ABGA01120352.1/1652-1932 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 73.8 bits (37), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgtgccactgcactccagcctgtgcgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABGA01216320.1/8744-8462 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 73.8 bits (37), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 219 ttgcagtgagccaagatcatgccactgcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AACZ02147783.1/20859-20578 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 73.8 bits (37), Expect = 2e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| ||||||| | |||||||||||| |||||||||||||| ||
Sbjct: 218 ttgcagtgagctgagatcgcgccactgcattccagcctgggcaacagagcaagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;ABSL01057357.1/238468-238749 9606:Homo sapiens
(human)
Length = 282
Score = 73.8 bits (37), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||
Sbjct: 218 ttgcagtgagccgagatcacgccactgcactcctgcctgggcgacagagcaagactc 274
>RF00017;Metazoa_SRP;ABBA01005081.1/46261-46548 9606:Homo sapiens
(human)
Length = 288
Score = 73.8 bits (37), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 106 tgccactgcactccagcctgggcaacagagcaagactccgtctcaaaaa 154
>RF00017;Metazoa_SRP;ABBA01031768.1/44728-45012 9606:Homo sapiens
(human)
Length = 285
Score = 73.8 bits (37), Expect = 2e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||| | |||||||| |||||| ||||||||||||| ||||||||||||||| ||
Sbjct: 221 ttgcagtgtgctgagatcacaccactgcactccagcctgggtgacagagcaagactccgt 280
Query: 61 ctcaa 65
|||||
Sbjct: 281 ctcaa 285
>RF00017;Metazoa_SRP;ABBA01020160.1/24340-24621 9606:Homo sapiens
(human)
Length = 282
Score = 73.8 bits (37), Expect = 2e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 238 gccactgtactccagcctgggtgacagagcaagactctgtctcaa 282
>RF00017;Metazoa_SRP;CABD01052359.1/621-902 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 73.8 bits (37), Expect = 2e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| ||||||| | |||||||||||| |||||||||||||| ||
Sbjct: 218 ttgcagtgagctgagatcgcgccactgcattccagcctgggcaacagagcaagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AANU01212875.1/19509-19790 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 73.8 bits (37), Expect = 2e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||| ||
Sbjct: 218 ttgcagtgagccaagatcacgccactgcactccagcctgggtgacagagcaagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AANU01253345.1/1265-1546 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 73.8 bits (37), Expect = 2e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| |||||||||||||||||||||| |||||| ||
Sbjct: 218 ttgcagtgagctgagattgcgccactgcactccagcctgggcgacagagcgagactccgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AANU01204489.1/18176-18458 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 73.8 bits (37), Expect = 2e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||| ||
Sbjct: 219 ttgcagtgagctgagatcacgccactgcactccagcctgggcgatagagtgagactccgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00026;U6;ABBA01031862.1/10800-10940 9606:Homo sapiens (human)
Length = 141
Score = 73.8 bits (37), Expect = 2e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 4 tgccactgcactccagcctgggcgacagagcaggactccgtctcaaaaa 52
>RF00017;Metazoa_SRP;AACZ02005603.1/12096-12395 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 71.9 bits (36), Expect = 9e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||| |||| ||||||| ||||||| ||||| ||||||||||||||| ||
Sbjct: 217 ttgcagtgagctgaaatcacgccactgcactccagactgggtgacagagcaagactccgt 276
Query: 61 ctcaaaaa 68
|| |||||
Sbjct: 277 ctaaaaaa 284
>RF00017;Metazoa_SRP;AACZ02153889.1/8080-7794 9598:Pan troglodytes
(chimpanzee)
Length = 287
Score = 71.9 bits (36), Expect = 9e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 104 gccactgcactccagcctgggcgacagagcgagactccgtctcaaaaa 151
>RF00017;Metazoa_SRP;AANU01261717.1/58829-59110 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 71.9 bits (36), Expect = 9e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagact 56
|||||||||| |||||||||||||||| |||||||||| |||||||||| |||||
Sbjct: 220 ttgcagtgagctgagatcatgccactgccctccagcctgcgcgacagagcgagact 275
>RF00017;Metazoa_SRP;AANU01289562.1/5867-5582 9544:Macaca mulatta
(rhesus monkey)
Length = 286
Score = 71.9 bits (36), Expect = 9e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 6 gtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||||||||| |||||||| |||||||||||||| ||||||| |||||| |||||||
Sbjct: 227 gtgagttgagattgtgccactgcactccagcctgggcaacagagcgagactccgtctcaa 286
>RF00100;7SK;AADA01241262.1/1621-1382 9598:Pan troglodytes
(chimpanzee)
Length = 240
Score = 71.9 bits (36), Expect = 9e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||||| ||||||||||||||||||||| |||| | ||
Sbjct: 9 ttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtgagaccccgt 68
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 69 ctcaaaaa 76
>RF00017;Metazoa_SRP;ABBA01034078.1/27831-28106 9606:Homo sapiens
(human)
Length = 276
Score = 69.9 bits (35), Expect = 4e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacag 47
|||||||||| |||||||||||||||| |||| ||||||||||||||
Sbjct: 212 ttgcagtgagctgagatcatgccactgcactctagcctgggcgacag 258
>RF00017;Metazoa_SRP;AADB02018502.1/111428-111708 9606:Homo sapiens
(human)
Length = 281
Score = 69.9 bits (35), Expect = 4e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 239 cactgcactccagcctgggcgacagagcaagactccgtctcaa 281
>RF00017;Metazoa_SRP;ABSL01045524.1/410-121 9606:Homo sapiens
(human)
Length = 290
Score = 69.9 bits (35), Expect = 4e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 14 agatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||| |||||| ||||||||||||| |||||||||| |||| ||||||||||
Sbjct: 97 agatcataccactgcactccagcctgggtgacagagcaatactctgtctcaaaaa 151
>RF00017;Metazoa_SRP;AADB02012959.1/461482-461201 9606:Homo sapiens
(human)
Length = 282
Score = 69.9 bits (35), Expect = 4e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||| ||||| |||||||| ||||||| |||||||||||||||||||| | |||||| ||
Sbjct: 218 ttgctgtgagctgagatcacgccactgcactccagcctgggcgacagaacgagactccgt 277
Query: 61 ctc 63
|||
Sbjct: 278 ctc 280
>RF00017;Metazoa_SRP;AK057594.1/1557-1837 9606:Homo sapiens (human)
Length = 281
Score = 69.9 bits (35), Expect = 4e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 239 cactgcactccagcctgggcgacagagcaagactccgtctcaa 281
>RF00017;Metazoa_SRP;AADD01150616.1/16450-16738 9606:Homo sapiens
(human)
Length = 289
Score = 69.9 bits (35), Expect = 4e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 14 agatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||| |||||| ||||||||||||| |||||||||| |||| ||||||||||
Sbjct: 97 agatcataccactgcactccagcctgggtgacagagcaatactctgtctcaaaaa 151
>RF01059;mir-598;ABSL01067202.1/5153-5285 9606:Homo sapiens
(human)
Length = 133
Score = 69.9 bits (35), Expect = 4e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| |||||||||||||| |||||||||||||| |
Sbjct: 79 ttgcagtgagccgagatcgcgccactgcactccagcctgggcaacagagcaagactccat 20
Query: 61 ctcaaaa 67
|||||||
Sbjct: 19 ctcaaaa 13
Score = 54.0 bits (27), Expect = 2e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaaaa 67
|||||||||||||| |||||||||||||| ||||||||
Sbjct: 89 actccagcctgggcaacagagcaagactccatctcaaaa 127
>RF00017;Metazoa_SRP;ABGA01255151.1/8211-7930 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 67.9 bits (34), Expect = 1e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||| || ||||||||||||||||||||||||||||| |||||||
Sbjct: 237 tgccaatgcactccagcctgggcgacagagcaagactccgtctcaa 282
>RF00017;Metazoa_SRP;ABGA01042411.1/30821-30535 9601:Pongo abelii
(Sumatran orangutan)
Length = 287
Score = 67.9 bits (34), Expect = 1e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 12 tgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
||||||| ||||||||||||||| ||||||| ||||||||||||||
Sbjct: 234 tgagatcttgccactgtactccaacctgggcaacagagcaagactc 279
>RF00017;Metazoa_SRP;AL117344.12/53999-53717 9606:Homo sapiens
(human)
Length = 283
Score = 67.9 bits (34), Expect = 1e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 238 tgccactgcattccagcctgggcgacagagcaagactctgtctcaa 283
>RF00017;Metazoa_SRP;CABD01139422.2/94-374 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 281
Score = 67.9 bits (34), Expect = 1e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 12 tgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||| |||| || ||||||||||||||||||| |||| |||||||
Sbjct: 228 tgagatcatgccattgtagtctagcctgggcgacagagcaaaactcygtctcaa 281
>RF00017;Metazoa_SRP;AANU01253812.1/35434-35700 9544:Macaca mulatta
(rhesus monkey)
Length = 267
Score = 67.9 bits (34), Expect = 1e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 3 gcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtct 62
|||||||| |||||| |||||||| ||||||||||||| ||||||||||||||| |||
Sbjct: 86 gcagtgagccgagatcgtgccactgcactccagcctggg-gacagagcaagactccatct 144
Query: 63 caaaaa 68
||||||
Sbjct: 145 caaaaa 150
>RF00017;Metazoa_SRP;AC191812.4/125814-126081 9544:Macaca mulatta
(rhesus monkey)
Length = 268
Score = 67.9 bits (34), Expect = 1e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 3 gcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtct 62
|||||||| |||||| |||||||| ||||||||||||| ||||||||||||||| |||
Sbjct: 86 gcagtgagccgagatcgtgccactgcactccagcctggg-gacagagcaagactccatct 144
Query: 63 caaaaa 68
||||||
Sbjct: 145 caaaaa 150
>RF00017;Metazoa_SRP;ABGA01380438.1/1031-1312 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 65.9 bits (33), Expect = 6e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||
Sbjct: 218 ttgcagtgagctgagatcactccactgtgcttcagcctgggcaacagagcaagactc 274
>RF00017;Metazoa_SRP;ABGA01148240.1/6183-5903 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 65.9 bits (33), Expect = 6e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagact 56
|||||||| ||||||||||||||||||||||||||||
Sbjct: 238 tgccactgcactccagcctgggcgacagagcaagact 274
>RF00017;Metazoa_SRP;ABGA01297371.1/1800-1539 9601:Pongo abelii
(Sumatran orangutan)
Length = 262
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||| |||||||||||| |||||||||||||||| |||| |||||
Sbjct: 103 tgccactgcactccagcctggacgacagagcaagactccgtctaaaaaa 151
>RF00017;Metazoa_SRP;ABGA01033679.1/8172-7892 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 65.9 bits (33), Expect = 6e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||||||||||||||||||
Sbjct: 239 gccactgcactccagcctgggcgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABGA01309353.1/362-651 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| ||||||||||||||||||||||| ||||||
Sbjct: 226 ttgcagtgagccgagatcttgccactgtactccagcctgggcaacagag 274
>RF00017;Metazoa_SRP;AADA01079623.1/10445-10731 9598:Pan troglodytes
(chimpanzee)
Length = 287
Score = 65.9 bits (33), Expect = 6e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 243 gccactgcactccagcccgggcgacagagcaagactccgtctcaa 287
>RF00017;Metazoa_SRP;AACZ02181236.1/3995-3712 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
||||| |||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 220 ttgcactgagctgagatcatgccactgcactccagcctgggcaacagag 268
>RF00017;Metazoa_SRP;AADA01176124.1/10115-9833 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||||||||||||| || |||||||||| |||||||
Sbjct: 219 ttgcagtgagctgagatcatgccactgcaccccagcctgggtgacagag 267
>RF00017;Metazoa_SRP;AADA01211269.1/2480-2761 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 65.9 bits (33), Expect = 6e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||||| |||||||||||||| |||| || |||||| ||
Sbjct: 218 ttgcagtgagctgagattgtgccactgcactccagcctgggcaacagggcgagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AACZ02117017.1/1641-1361 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 65.9 bits (33), Expect = 6e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||||||| | |||||||||||||||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcattccagcctgggcgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABBA01048440.1/9037-9319 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| ||| ||| |||||||||||||| ||||||| |||||| ||
Sbjct: 219 ttgcagtgagccgagatcacgcctctgcactccagcctgggcaacagagcgagactctgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;AADB02018056.1/11135-11417 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AADD01102462.1/25609-25327 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AADB02036916.1/602388-602106 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcactccagcctgggcaacagagcaagactc 275
>RF00017;Metazoa_SRP;AL162732.43/134760-134478 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABBA01023443.1/8460-8729 9606:Homo sapiens
(human)
Length = 270
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||| |||||||||||||||||||||| |||||| |||||||||
Sbjct: 103 tgccactgcactccagcctgggcgacagagcgagactccatctcaaaaa 151
>RF00017;Metazoa_SRP;AL022323.7/46269-46551 9606:Homo sapiens
(human)
Length = 283
Score = 65.9 bits (33), Expect = 6e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||||||||||||||||||
Sbjct: 239 gccactgcactccagcctgggcgacagagcaagactc 275
>RF00017;Metazoa_SRP;AANU01234775.1/5697-5978 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 218 ttgcagtgagctgagatggtgccactgcactccagcctgggcgacagag 266
>RF00017;Metazoa_SRP;AANU01194555.1/9029-8746 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 65.9 bits (33), Expect = 6e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtct 62
|||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 241 ccactgcactccagcctgggcgacagagcaagactccgtct 281
>RF00100;7SK;CABD01566760.1/850-1179 9595:Gorilla gorilla gorilla
(Western lowland gorilla)
Length = 330
Score = 65.9 bits (33), Expect = 6e-11
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||||| ||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 314 tgccactgtgctccagcctgggcaacacagcaagactctgtctcaaaaa 266
>RF00017;Metazoa_SRP;ABGA01386541.1/3134-2852 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 63.9 bits (32), Expect = 2e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtc 61
||||||| | ||||||| ||||| |||||||||||||||| |||||||||||| | |||
Sbjct: 220 tgcagtgggctgagatcgcgccaccgtactccagcctgggcaacagagcaagaccccgtc 279
Query: 62 tcaa 65
||||
Sbjct: 280 tcaa 283
>RF00017;Metazoa_SRP;ABGA01015944.1/10578-10296 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 63.9 bits (32), Expect = 2e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||||| |||||||||||||| |||||| |||||| ||
Sbjct: 219 ttgcagtgagccgagatcgtgccactgcactccagcctgggcaacagagtgagactctgt 278
Query: 61 ctca 64
||||
Sbjct: 279 ctca 282
>RF00017;Metazoa_SRP;AADA01277546.1/7411-7694 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 63.9 bits (32), Expect = 2e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||| |||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 221 tgcactgagctgagatcatgccactgcactccagcctgggcaacagag 268
>RF00017;Metazoa_SRP;AACZ02012885.1/24458-24739 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 63.9 bits (32), Expect = 2e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
||||||||| |||||||| ||||||| |||||||||||||| ||||||
Sbjct: 219 tgcagtgagctgagatcaagccactgcactccagcctgggcaacagag 266
>RF00017;Metazoa_SRP;AADA01002908.1/3722-3440 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 63.9 bits (32), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagact 56
|||||||||| |||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagact 274
>RF00017;Metazoa_SRP;ABSL01022297.1/5514-5788 9606:Homo sapiens
(human)
Length = 275
Score = 63.9 bits (32), Expect = 2e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||||| |||||||||| || |||||| |||||||| ||
Sbjct: 84 ttgcagtgagccgagatcctgccactgcactccagcct-ggtgacagaacaagactccgt 142
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 143 ctcaaaaa 150
>RF00017;Metazoa_SRP;AADC01132091.1/2625-2347 9606:Homo sapiens
(human)
Length = 279
Score = 63.9 bits (32), Expect = 2e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 5 agtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctca 64
|||||| |||||||||||||||| |||| |||||||| ||||||| |||||| ||||||
Sbjct: 88 agtgagctgagatcatgccactgcactctagcctgggtgacagagggagactctgtctca 147
>RF00017;Metazoa_SRP;CABD01427964.2/1790-1511 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 280
Score = 63.9 bits (32), Expect = 2e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| |||||| ||||||||||||| |||||||| |||||| ||
Sbjct: 84 ttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagcgagactccgt 143
Query: 61 ctcaaaaa 68
|| |||||
Sbjct: 144 ctaaaaaa 151
>RF00017;Metazoa_SRP;AANU01117906.1/5885-6165 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 63.9 bits (32), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagact 56
|||||||||| ||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 219 ttgcagtgagctgagatctcaccactgcactccagcctgggcaacagagcaagact 274
>RF00017;Metazoa_SRP;ABGA01051379.1/12317-12584 9601:Pongo abelii
(Sumatran orangutan)
Length = 268
Score = 61.9 bits (31), Expect = 9e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagac 55
|||||||||| ||||||| |||| || ||||||||||||||||||||| |||||
Sbjct: 206 ttgcagtgagctgagatcgcgccaatgcactccagcctgggcgacagagtaagac 260
>RF00017;Metazoa_SRP;ABGA01295388.1/2260-2541 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 61.9 bits (31), Expect = 9e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 31 tccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||||||||||||||||| |||||||
Sbjct: 248 tccagcctgggcgacagagcaagactccgtctcaa 282
>RF00017;Metazoa_SRP;AACZ02080787.1/7638-7919 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 61.9 bits (31), Expect = 9e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||| |||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 105 ccactgcactccagcctgggcaacagagcgagactccgtctcaaaaa 151
>RF00017;Metazoa_SRP;AADA01128625.1/41280-41564 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 61.9 bits (31), Expect = 9e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccac-tgtactccagcctgggc 42
|||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 220 ttgcagtgagctgagatcatgccacttgtactccagcctgggc 262
>RF00017;Metazoa_SRP;AADA01339504.1/248-529 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 61.9 bits (31), Expect = 9e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 31 tccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||||||||||||||||| |||||||
Sbjct: 248 tccagcctgggcgacagagcaagactccgtctcaa 282
>RF00017;Metazoa_SRP;ABSL01060815.1/32590-32309 9606:Homo sapiens
(human)
Length = 282
Score = 61.9 bits (31), Expect = 9e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 13 gagatcatgccactgtactccagcctgggcgacagagcaagactcggtctc 63
||||||| ||||||| |||||||||||||||||||| | |||||| |||||
Sbjct: 230 gagatcacgccactgcactccagcctgggcgacagaacgagactccgtctc 280
>RF00017;Metazoa_SRP;AADD01174862.1/2022-2305 9606:Homo sapiens
(human)
Length = 284
Score = 61.9 bits (31), Expect = 9e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactc 57
||||| |||||||||||||||||||||||||||||
Sbjct: 242 cactgcactccagcctgggcgacagagcaagactc 276
>RF00017;Metazoa_SRP;CABD01037784.1/2910-2630 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 281
Score = 61.9 bits (31), Expect = 9e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctca 64
|||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 238 ccactgtactccagcctgggtgacagatcaagactccgtctca 280
>RF00017;Metazoa_SRP;AANU01223949.1/2547-2845 9544:Macaca mulatta
(rhesus monkey)
Length = 299
Score = 61.9 bits (31), Expect = 9e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctc 63
|||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 255 gccactgtactccagcctgggcaacacagcaagacccggtctc 297
>RF00017;Metazoa_SRP;AANU01260312.1/43829-43547 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 61.9 bits (31), Expect = 9e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
||||||| || ||||||||| |||||| | |||||||||||| ||||||| |||||| ||
Sbjct: 219 ttgcagtaagctgagatcataccactgcattccagcctgggcaacagagccagactctgt 278
Query: 61 ctc 63
|||
Sbjct: 279 ctc 281
>RF00017;Metazoa_SRP;AANU01289128.1/38957-38676 9544:Macaca mulatta
(rhesus monkey)
Length = 282
Score = 61.9 bits (31), Expect = 9e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||||| |||||| |||||||||||||| |||||| |||||| ||
Sbjct: 220 ttgcagtgagctgagatcacaccactgcactccagcctgggcaacagagtgagactctgt 279
Query: 61 ctc 63
|||
Sbjct: 280 ctc 282
>RF00004;U2;ABSL01059125.1/5621-5763 9606:Homo sapiens (human)
Length = 143
Score = 61.9 bits (31), Expect = 9e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaaaa 67
||||||| |||||||||||||| ||||||| |||||| |||||||||
Sbjct: 118 gccactgcactccagcctgggcaacagagcgagactctgtctcaaaa 72
>RF00017;Metazoa_SRP;ABGA01095204.1/17559-17841 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctc 63
||||||| || ||| |||| |||| | ||||||||||| ||||||||||||||| |||||
Sbjct: 222 cagtgagctgcgattatgctactgcattccagcctgggtgacagagcaagactctgtctc 281
Query: 64 aa 65
||
Sbjct: 282 aa 283
>RF00017;Metazoa_SRP;ABGA01141226.1/3408-3111 9601:Pongo abelii
(Sumatran orangutan)
Length = 298
Score = 60.0 bits (30), Expect = 4e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactc 57
|||||||| ||||||||||||| |||||||||||||||
Sbjct: 103 tgccactgcactccagcctgggtgacagagcaagactc 140
>RF00017;Metazoa_SRP;ABGA01063191.1/3004-2650 9601:Pongo abelii
(Sumatran orangutan)
Length = 355
Score = 60.0 bits (30), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
|||||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 84 ttgcagtgagctgagatggtgccactgaactccagcctgggcgaca 129
>RF00017;Metazoa_SRP;ABGA01006118.1/24807-24526 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 60.0 bits (30), Expect = 4e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 13 gagatcatgccactgtactccagcctgggc 42
||||||||||||||||||||||||||||||
Sbjct: 230 gagatcatgccactgtactccagcctgggc 259
>RF00017;Metazoa_SRP;ABGA01158646.1/1415-1133 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 60.0 bits (30), Expect = 4e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| ||||||| |||||||| ||||||||||||||
Sbjct: 219 ttgcagtgagctgagatcgtgccactgcactccagcctgggc 260
>RF00017;Metazoa_SRP;ABGA01338212.1/1509-1791 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 60.0 bits (30), Expect = 4e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 219 ttgcagtgagctgagatcatgtcactgcactccagcctgggc 260
>RF00017;Metazoa_SRP;AACZ02068587.1/25075-25357 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 60.0 bits (30), Expect = 4e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcct 38
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 219 ttgcagtgagctgagatcatgccactgcactccagcct 256
>RF00017;Metazoa_SRP;AADA01277245.1/13528-13229 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 60.0 bits (30), Expect = 4e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
||||||||||| ||||||| |||| || ||||||||||||||||| |||| | |||| ||
Sbjct: 219 ttgcagtgagtagagatcacgccattgcactccagcctgggcgac-gagcgaaactctgt 277
Query: 61 ctcaaa 66
||||||
Sbjct: 278 ctcaaa 283
>RF00017;Metazoa_SRP;AADA01273745.1/10515-10803 9598:Pan troglodytes
(chimpanzee)
Length = 289
Score = 60.0 bits (30), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||| |||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 114 cactgcactccagcctgggcaacatagcaagactccgtctcaaaaa 159
>RF00017;Metazoa_SRP;AACZ02018774.1/11714-11431 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 60.0 bits (30), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
|||||||||| ||||||| |||| |||||||||||||||||||||
Sbjct: 220 ttgcagtgagctgagatcgcgccattgtactccagcctgggcgaca 265
>RF00017;Metazoa_SRP;AC003684.1/209339-209700 9606:Homo sapiens
(human)
Length = 362
Score = 60.0 bits (30), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
|||||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 75 ttgcagtgagctgagatggtgccactgaactccagcctgggcgaca 120
>RF00017;Metazoa_SRP;AADB02019970.1/70486-70770 9606:Homo sapiens
(human)
Length = 285
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctc 63
||||||| || |||| |||||||| |||||||||||||| |||||| |||||| |||||
Sbjct: 224 cagtgagctgggatcgtgccactgcactccagcctgggcaacagagtgagactctgtctc 283
Query: 64 aa 65
||
Sbjct: 284 aa 285
>RF00017;Metazoa_SRP;ABBA01002822.1/12713-12997 9606:Homo sapiens
(human)
Length = 285
Score = 60.0 bits (30), Expect = 4e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctc 63
||||||| || |||| |||||||| |||||||||||||| |||||| |||||| |||||
Sbjct: 224 cagtgagctgggatcgtgccactgcactccagcctgggcaacagagtgagactctgtctc 283
Query: 64 aa 65
||
Sbjct: 284 aa 285
>RF00017;Metazoa_SRP;CABD01013935.1/10958-10676 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 60.0 bits (30), Expect = 4e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
||||||||||| |||||||||||| || | ||||||||||||||||
Sbjct: 219 ttgcagtgagtcgagatcatgccattgcattccagcctgggcgaca 264
>RF00017;Metazoa_SRP;AANU01208877.1/1615-1335 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 60.0 bits (30), Expect = 4e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| || || |||||||||||||||||||||||||
Sbjct: 217 ttgcagtgagctgtgaccatgccactgtactccagcctgggc 258
>RF00017;Metazoa_SRP;AANU01238130.1/1369-1652 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 60.0 bits (30), Expect = 4e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatca-tgccactgtactccagcctgggcgacagagcaagactcgg 59
|||||||||| ||||||| |||||||| |||||||||||||||||| || |||||| |
Sbjct: 219 ttgcagtgagctgagatctgtgccactgcactccagcctgggcgacaaagtgagactctg 278
Query: 60 tctcaa 65
||||||
Sbjct: 279 tctcaa 284
>RF00017;Metazoa_SRP;AANU01248061.1/85213-84931 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 60.0 bits (30), Expect = 4e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| ||||||| |||||||| ||||||||||||||
Sbjct: 219 ttgcagtgagctgagatcgtgccactgcactccagcctgggc 260
>RF00100;7SK;AANU01262287.1/76858-77191 9544:Macaca mulatta (rhesus
monkey)
Length = 334
Score = 60.0 bits (30), Expect = 4e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcct 38
|||||||||||||||||||||||| || ||||||||||
Sbjct: 318 ttgcagtgagttgagatcatgccattgcactccagcct 281
>RF00017;Metazoa_SRP;ABDC01210144.1/30937-30658 30608:Microcebus
murinus (gray mouse lemur)
Length = 280
Score = 58.0 bits (29), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| |||||||||||||| ||| |||||||||| |||||||
Sbjct: 236 gccactgcactccagcctgggcaacatagcaagactctgtctcaa 280
>RF00017;Metazoa_SRP;ABDC01419402.1/367-644 30608:Microcebus murinus
(gray mouse lemur)
Length = 278
Score = 58.0 bits (29), Expect = 1e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaaga 54
||||||||||||||||||||| |||||||||||
Sbjct: 235 ccactgtactccagcctgggcaacagagcaaga 267
>RF00017;Metazoa_SRP;ABGA01283643.1/35046-35332 9601:Pongo abelii
(Sumatran orangutan)
Length = 287
Score = 58.0 bits (29), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| ||||||||||||||||||||| |||||| |||||||
Sbjct: 243 gccactgcactccagcctgggcgacagagtgagactccgtctcaa 287
>RF00017;Metazoa_SRP;ABGA01026025.1/1-283 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| |||||||| |||||||||||||| ||||||
Sbjct: 219 ttgcagtgagccgagatcgtgccactgcactccagcctgggcaacagag 267
>RF00017;Metazoa_SRP;ABGA01304807.1/2101-1819 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| ||||| || |||||||||||||||||||||
Sbjct: 219 ttgcagtgagcagagatcgtgccattgcactccagcctgggcgacagag 267
>RF00017;Metazoa_SRP;ABGA01294512.1/5800-5493 9601:Pongo abelii
(Sumatran orangutan)
Length = 308
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||| |||||||||||||| |||||| |||||| ||||||||||
Sbjct: 99 tgccactgcactccagcctgggcaacagagtgagactccgtctcaaaaa 147
>RF00017;Metazoa_SRP;ABGA01273653.1/39579-39861 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||| ||||||||| ||||||||||||| |||||||
Sbjct: 219 ttgcagtgagccgagattatgccactgcactccagcctgggtgacagag 267
>RF00017;Metazoa_SRP;ABGA01014693.1/1591-1309 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| ||||||||||||| ||||||| |||||| ||
Sbjct: 219 ttgcagtgagctgagatggcgccactgcactccagcctgggtgacagagtgagactctgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;AADA01272315.1/26073-26351 9598:Pan troglodytes
(chimpanzee)
Length = 279
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| |||||||| ||||||||||||| |||||||
Sbjct: 215 ttgcagtgagcagagatcgtgccactgcactccagcctgggtgacagag 263
>RF00017;Metazoa_SRP;AACZ02216483.1/5974-6256 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||||||| | |||||||||||| ||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcattccagcctgggcaacagagcaagactc 275
>RF00017;Metazoa_SRP;AADA01310983.1/9423-9705 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
||||||||| ||||||| ||||| ||||||||||||| |||||||
Sbjct: 85 tgcagtgagctgagatcgtgccattgtactccagcctaggcgaca 129
>RF00017;Metazoa_SRP;AACZ02132279.1/8599-8317 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtct 62
|||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 240 ccactgcactccagcctgggcgacagagcgagactctgtct 280
>RF00017;Metazoa_SRP;AC092068.2/27193-27483 9606:Homo sapiens
(human)
Length = 291
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||||| |||| ||| ||| |||||||||||||||||
Sbjct: 84 ttgcagtgagctgagatcgtgcctctgcactgcagcctgggcgacagag 132
>RF00017;Metazoa_SRP;AADD01159520.1/9861-9582 9606:Homo sapiens
(human)
Length = 280
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| ||| || ||||||| |||||| |||||||||||||| ||
Sbjct: 216 ttgcagtgagctgagatcgcaccattgcactccagtctgggcaacagagcaagactctgt 275
Query: 61 ctcaa 65
|||||
Sbjct: 276 ctcaa 280
>RF00017;Metazoa_SRP;AADB02014112.1/193548-193266 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||||| |||| || ||||||||||||||||||||
Sbjct: 219 ttgcagtgagctgagatcacgccattgacctccagcctgggcgacagag 267
>RF00017;Metazoa_SRP;ABBA01074389.1/24711-24998 9606:Homo sapiens
(human)
Length = 288
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||||||||| ||||||||
Sbjct: 244 gccactgcactccagcctgggcgacagaacaagactc 280
>RF00017;Metazoa_SRP;AADB02001004.1/28119-27839 9606:Homo sapiens
(human)
Length = 281
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| ||||| ||||||||||||||||| ||||||
Sbjct: 217 ttgcagtgagctgagattgtgccattgtactccagcctgggcaacagag 265
>RF00017;Metazoa_SRP;AADC01021343.1/13796-13516 9606:Homo sapiens
(human)
Length = 281
Score = 58.0 bits (29), Expect = 1e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 15 gatcatgccactgtactccagcctgggcgacagagcaagac 55
||||||||||||| |||||||| |||| |||||||||||||
Sbjct: 98 gatcatgccactgcactccagcttgggtgacagagcaagac 138
>RF00017;Metazoa_SRP;ABSL01071167.1/4313-4030 9606:Homo sapiens
(human)
Length = 284
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
||||| |||| |||||||||||||||| |||||||||||| | ||||||
Sbjct: 220 ttgcactgagctgagatcatgccactgcactccagcctggacaacagag 268
>RF00017;Metazoa_SRP;AL357500.17/74632-74351 9606:Homo sapiens
(human)
Length = 282
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||| |||||||||||||| ||||||| |||||| ||
Sbjct: 218 ttgcagtgagccaagatcacaccactgcactccagcctgggcaacagagcgagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AADD01109841.1/1684-1407 9606:Homo sapiens
(human)
Length = 278
Score = 58.0 bits (29), Expect = 1e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||||| |||||| |||||||||||||| ||||||
Sbjct: 84 ttgcagtgagctgagatcactccactgcactccagcctgggccacagag 132
>RF00017;Metazoa_SRP;ABSL01070932.1/5777-6059 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| |||| || ||||||||||||| ||||||| |||||| ||
Sbjct: 219 ttgcagtgagctgagatcgcgccattgcactccagcctgggtgacagagtgagactctgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;AC068722.6/3090-2807 9606:Homo sapiens (human)
Length = 284
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| ||||| |||||||| ||||||||| |||| ||||||||||||||
Sbjct: 219 ttgcagtgagccaagatcgtgccactgcactccagcccgggcaacagagcaagactc 275
>RF00017;Metazoa_SRP;AADC01141441.1/107153-106870 9606:Homo sapiens
(human)
Length = 284
Score = 58.0 bits (29), Expect = 1e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgac-agagcaagactcgg 59
|||||||||| ||||||| |||| ||||||||||||||||| || ||||||| |||| |
Sbjct: 220 ttgcagtgagccgagatcacgccattgtactccagcctgggcaacaagagcaaaactctg 279
Query: 60 tctca 64
|||||
Sbjct: 280 tctca 284
>RF00017;Metazoa_SRP;AADB02009732.1/81584-81866 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaa 65
|||||||||||||| |||||||||||||| |||||||
Sbjct: 247 actccagcctgggcaacagagcaagactctgtctcaa 283
>RF00017;Metazoa_SRP;ABBA01050605.1/325399-325117 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||| || |||||||||||||||||| ||| |||||| ||
Sbjct: 219 ttgcagtgagctgagatagcgccattgcactccagcctgggcgacaaagcgagactctgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;ABSL01062394.1/28154-28435 9606:Homo sapiens
(human)
Length = 282
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| ||||||| |||||||||| || ||||||||||||| ||
Sbjct: 218 ttgcagtgagctgagatcgggccactgcactccagcctaagcaacagagcaagactacgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;CABD01187458.1/578-859 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 58.0 bits (29), Expect = 1e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 13 gagatcatgccactgtactccagcctgggcgacagagcaagactc 57
||||||| ||||||| |||||| ||||||||||||||| ||||||
Sbjct: 230 gagatcacgccactgcactccaacctgggcgacagagccagactc 274
>RF00017;Metazoa_SRP;CABD01372198.1/1007-1291 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 285
Score = 58.0 bits (29), Expect = 1e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 5 agtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtctca 64
|||||| |||||||| | ||||| ||||||||||||||| |||||||||||| ||||||
Sbjct: 226 agtgagctgagatcacgtcactgc-ctccagcctgggcgatagagcaagactcagtctca 284
Query: 65 a 65
|
Sbjct: 285 a 285
>RF00017;Metazoa_SRP;CABD01032836.1/10594-10876 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 13 gagatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||| |||||| ||||||||||||||| ||||||| |||||| |||||||
Sbjct: 231 gagatcgtgccaccgtactccagcctgggtgacagagtgagactccgtctcaa 283
>RF00017;Metazoa_SRP;CABD01580862.2/207-489 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| | || |||||||||||||||||| ||| || ||||||||
Sbjct: 219 ttgcagtgagctgagattacgctactgtactccagcctgggtgacggaacaagactc 275
>RF00017;Metazoa_SRP;AANU01293401.1/70984-71266 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| || |||| ||||||| ||||||||||| | |||||||||||||||
Sbjct: 219 ttgcagtgaggtgggatcgcgccactgcactccagcctgagtgacagagcaagactc 275
>RF00017;Metazoa_SRP;AANU01246877.1/1162-1444 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 58.0 bits (29), Expect = 1e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||| ||||| |||||||| ||||||| ||||||||||| |||||||| |||||| ||
Sbjct: 219 ttgcggtgaggtgagatcacgccactgcactccagcctgcacgacagagtgagactctgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;AANU01291377.1/24205-24485 9544:Macaca mulatta
(rhesus monkey)
Length = 281
Score = 58.0 bits (29), Expect = 1e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
||||||| || |||||||||||| ||| |||||||||||||| | ||||| ||||||
Sbjct: 219 ttgcagtaagctgagatcatgccgctgcactccagcctgggccatagagcgagactc 275
>RF00017;Metazoa_SRP;AANU01049102.1/520-821 9544:Macaca mulatta
(rhesus monkey)
Length = 302
Score = 58.0 bits (29), Expect = 1e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 17 tcatgccactgtactccagcctgggcgacagagcaag 53
||||||||||| ||||||||||||| |||||||||||
Sbjct: 235 tcatgccactgcactccagcctgggtgacagagcaag 271
>RF00017;Metazoa_SRP;AAQR01732305.1/1558-1275 30611:Otolemur
garnettii (small-eared galago)
Length = 284
Score = 56.0 bits (28), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||| |||||||||||||| ||| |||||||| |||||||||
Sbjct: 241 ccactgcactccagcctgggcaacatagcaagacccggtctcaa 284
>RF00017;Metazoa_SRP;ABDC01524278.1/508-207 30608:Microcebus murinus
(gray mouse lemur)
Length = 302
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 28 tactccagcctgggcgacagagcaagactcggtctc 63
||||||||||||||| |||||||||||||| |||||
Sbjct: 265 tactccagcctgggcaacagagcaagactctgtctc 300
>RF00017;Metazoa_SRP;ABGA01173288.1/9866-10150 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 56.0 bits (28), Expect = 6e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 26 tgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||||||| ||||||| |||||| |||||||
Sbjct: 246 tgtactccagcctgggcaacagagcgagactctgtctcaa 285
>RF00017;Metazoa_SRP;ABGA01319971.1/6088-5802 9601:Pongo abelii
(Sumatran orangutan)
Length = 287
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 14 agatcatgccactgtactccagcctgggcgacagag 49
||||| |||||||| |||||||||||||||||||||
Sbjct: 97 agatcgtgccactgcactccagcctgggcgacagag 132
>RF00017;Metazoa_SRP;ABGA01172272.1/9412-9694 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactc 57
|||||| ||||||||||||| |||||||||||||||
Sbjct: 240 ccactgcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABGA01228981.1/2904-2602 9601:Pongo abelii
(Sumatran orangutan)
Length = 303
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| |||||| ||||||| || || |||||||||||||| ||
Sbjct: 219 ttgcagtgagctgagatcgcaccactgcactccagactaggtgacagagcaagactttgt 278
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 279 ctcaaaaa 286
>RF00017;Metazoa_SRP;ABGA01265337.1/4413-4694 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 56.0 bits (28), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||| |||||||||| || ||||||||||||||| |||||||
Sbjct: 239 ccactgcactccagcctaggtgacagagcaagactctgtctcaa 282
>RF00017;Metazoa_SRP;AADA01187409.1/9085-8803 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactc 57
|||||| ||||||||||||| |||||||||||||||
Sbjct: 240 ccactgcactccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;DQ023266.1/31780-32079 9598:Pan troglodytes
(chimpanzee)
Length = 300
Score = 56.0 bits (28), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcga 44
||||||||||| ||||||| |||| || ||||||||||||||||
Sbjct: 219 ttgcagtgagtagagatcacgccattgcactccagcctgggcga 262
>RF00017;Metazoa_SRP;AADA01079699.1/1230-1531 9598:Pan troglodytes
(chimpanzee)
Length = 302
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| |||| || ||||||||||||||||| || |||||| ||
Sbjct: 218 ttgcagtgagctgagatcgcgccattgcactccagcctgggcgacgcagtgagactccgt 277
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 278 ctcaaaaa 285
>RF00017;Metazoa_SRP;ABSL01069009.1/74-362 9606:Homo sapiens (human)
Length = 289
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| |||||||||||||| |||||| ||||| ||
Sbjct: 84 ttgcagtgagccaagatcacgccactgcactccagcctgggctacagagtgagacttcgt 143
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 144 ctcaaaaa 151
>RF00017;Metazoa_SRP;AADC01090898.1/43314-43618 9606:Homo sapiens
(human)
Length = 305
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||| || |||||||| | ||||||||||| ||||| ||
Sbjct: 221 ttgcagtgagccgagatcgtgccattgcactccagcttaggcgacagagcgagacttcgt 280
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 281 ctcaaaaa 288
>RF00017;Metazoa_SRP;ABBA01054788.1/2681-2410 9606:Homo sapiens
(human)
Length = 272
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| |||||| ||||||||||| | |||| ||| |||||| ||
Sbjct: 84 ttgcagtgagccgagatcacaccactgcactccagcctgagtgacaaagcgagactccgt 143
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 144 ctcaaaaa 151
>RF00017;Metazoa_SRP;ABBA01074322.1/20848-20555 9606:Homo sapiens
(human)
Length = 294
Score = 56.0 bits (28), Expect = 6e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||| |||||||||||||| |||| ||||| ||| ||||||||||
Sbjct: 104 gccactgcactccagcctgggcaacagtgcaaggctctgtctcaaaaa 151
>RF00017;Metazoa_SRP;AADC01144185.1/1515-1226 9606:Homo sapiens
(human)
Length = 290
Score = 56.0 bits (28), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 3 gcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
|||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 1 gcagtgagctgagatggtgccactgaactccagcctgggcgaca 44
>RF00017;Metazoa_SRP;ABBA01010070.1/108367-108085 9606:Homo sapiens
(human)
Length = 283
Score = 56.0 bits (28), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||| |||||||||||||||||||||| |||| | |||||||
Sbjct: 240 ccactgcactccagcctgggcgacagagcgagaccctgtctcaa 283
>RF00017;Metazoa_SRP;ABBA01028980.1/11771-11491 9606:Homo sapiens
(human)
Length = 281
Score = 56.0 bits (28), Expect = 6e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||| |||||||||| || ||||||||||||||| |||||||
Sbjct: 238 ccactgcactccagcctaggtgacagagcaagactctgtctcaa 281
>RF00017;Metazoa_SRP;AANU01176107.1/18-301 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 56.0 bits (28), Expect = 6e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
||||||||| |||||| |||||||| ||||| | ||||| |||||||||||||||
Sbjct: 85 tgcagtgagctgagattgtgccactgcactccggtctgggtgacagagcaagactc 140
>RF00017;Metazoa_SRP;AANU01236619.1/11775-12057 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 56.0 bits (28), Expect = 6e-08
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
||||||||||||||||| |||||| ||||||||||||| ||||||| |||||| ||
Sbjct: 219 ttgcagtgagttgagattgcaccactgcactccagcctgggtgacagagtgagactctgt 278
Query: 61 ctca 64
||||
Sbjct: 279 ctca 282
>RF00017;Metazoa_SRP;AANU01272731.1/4934-4624 9544:Macaca mulatta
(rhesus monkey)
Length = 311
Score = 56.0 bits (28), Expect = 6e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||| |||||||||||||| |||||| |||||| ||||||||||
Sbjct: 100 gccactgcactccagcctgggcaacagagtgagactccgtctcaaaaa 147
>RF00017;Metazoa_SRP;AANU01247552.1/10901-10611 9544:Macaca mulatta
(rhesus monkey)
Length = 291
Score = 56.0 bits (28), Expect = 6e-08
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||||| ||||||||||||||| | || |||||||| |||||| ||
Sbjct: 84 ttgcagtgagctgagatcaggccactgtactccagtgt-ggtgacagagcgagactccgt 142
Query: 61 ctca 64
||||
Sbjct: 143 ctca 146
>RF00017;Metazoa_SRP;AANU01267855.1/1623-1923 9544:Macaca mulatta
(rhesus monkey)
Length = 301
Score = 56.0 bits (28), Expect = 6e-08
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| | ||| || |||||||| |||| ||||||||||| ||| ||
Sbjct: 218 ttgcagtgagccgagatcgtaccattgcactccagcgtgggtgacagagcaaggctctgt 277
Query: 61 ctcaaaaa 68
||||||||
Sbjct: 278 ctcaaaaa 285
>RF00017;Metazoa_SRP;AANU01094763.1/6796-6498 9544:Macaca mulatta
(rhesus monkey)
Length = 299
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagac 55
||||||||||||||||||||||| ||| ||||||||
Sbjct: 254 tgccactgtactccagcctgggcaacatagcaagac 289
>RF00554;SNORA48;AANU01228109.1/31707-31548 9544:Macaca mulatta
(rhesus monkey)
Length = 160
Score = 56.0 bits (28), Expect = 6e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||||||||||||||||| |||||| |||| |||||
Sbjct: 2 actccagcctgggcgacagagccagactctgtctaaaaaa 41
>RF00001;5S_rRNA;AADA01147158.1/66-195 9598:Pan troglodytes
(chimpanzee)
Length = 130
Score = 56.0 bits (28), Expect = 6e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||||||||||||||| | |||||| ||||||||||
Sbjct: 3 actccagcctgggcgacagaacgagactccgtctcaaaaa 42
>RF00017;Metazoa_SRP;AAQR01428863.1/697-425 30611:Otolemur garnettii
(small-eared galago)
Length = 273
Score = 54.0 bits (27), Expect = 2e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 19 atgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||||| | ||||||||||| || ||||||||||||| ||||||
Sbjct: 227 atgccactgcattccagcctgggtgatagagcaagactcgatctcaa 273
>RF00017;Metazoa_SRP;AAQR01624083.1/1597-1890 30611:Otolemur
garnettii (small-eared galago)
Length = 294
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagac 55
|||||||||||||||||||||| ||| ||||||||
Sbjct: 250 gccactgtactccagcctgggcaacacagcaagac 284
>RF00017;Metazoa_SRP;ABGA01270457.1/1567-1860 9601:Pongo abelii
(Sumatran orangutan)
Length = 294
Score = 54.0 bits (27), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctc 63
||||||| |||||||||||||||||||| | |||||| |||||
Sbjct: 250 gccactgcactccagcctgggcgacagaactagactccgtctc 292
>RF00017;Metazoa_SRP;ABGA01093781.1/18416-18133 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 54.0 bits (27), Expect = 2e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggc 42
||||||| |||||||| |||||||| |||||||||||||
Sbjct: 223 cagtgagctgagatcacgccactgtgctccagcctgggc 261
>RF00017;Metazoa_SRP;ABGA01242702.1/9795-10073 9601:Pongo abelii
(Sumatran orangutan)
Length = 279
Score = 54.0 bits (27), Expect = 2e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtct 62
||||||| ||||||| |||||| | |||||||||||| |||||||||||||| ||||
Sbjct: 218 cagtgagctgagatcgcaccactgcagtccagcctgggcaacagagcaagactctgtct 276
>RF00017;Metazoa_SRP;AADA01205371.1/5627-5975 9598:Pan troglodytes
(chimpanzee)
Length = 349
Score = 54.0 bits (27), Expect = 2e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtc 61
||||||||| |||||| | |||||||||||||| || ||| |||| ||||||||| ||
Sbjct: 85 tgcagtgagccgagatcgtaccactgtactccagtcttggcaacagggcaagactccatc 144
Query: 62 tcaaaaa 68
|||||||
Sbjct: 145 tcaaaaa 151
>RF00017;Metazoa_SRP;AACZ02048701.1/9629-9344 9598:Pan troglodytes
(chimpanzee)
Length = 286
Score = 54.0 bits (27), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||| ||||||||||||||||||||| |||||| |||||||
Sbjct: 244 cactgcactccagcctgggcgacagagtgagactctgtctcaa 286
>RF00017;Metazoa_SRP;AADA01016412.1/5183-5480 9598:Pan troglodytes
(chimpanzee)
Length = 298
Score = 54.0 bits (27), Expect = 2e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 105 ccactgcactccagcctgg-caacagagcaagactccgtctcaaaaa 150
>RF00017;Metazoa_SRP;AACZ02238209.1/208-501 9598:Pan troglodytes
(chimpanzee)
Length = 294
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagac 55
|||||||||||||||||||||| ||| ||||||||
Sbjct: 250 gccactgtactccagcctgggcaacacagcaagac 284
>RF00017;Metazoa_SRP;AACZ02187113.1/18594-18942 9598:Pan troglodytes
(chimpanzee)
Length = 349
Score = 54.0 bits (27), Expect = 2e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtc 61
||||||||| |||||| | |||||||||||||| || ||| |||| ||||||||| ||
Sbjct: 85 tgcagtgagccgagatcgtaccactgtactccagtcttggcaacagggcaagactccatc 144
Query: 62 tcaaaaa 68
|||||||
Sbjct: 145 tcaaaaa 151
>RF00017;Metazoa_SRP;AADC01137575.1/14194-14472 9606:Homo sapiens
(human)
Length = 279
Score = 54.0 bits (27), Expect = 2e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||| |||||||||||||| ||||||||||| | ||||||||||
Sbjct: 104 ccactgcactccagcctgggcaacagagcaagagcctgtctcaaaaa 150
>RF00017;Metazoa_SRP;AADB02013937.1/195-495 9606:Homo sapiens
(human)
Length = 301
Score = 54.0 bits (27), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||| ||||||||||||||||| |||| |||||| |||||||
Sbjct: 259 cactgcactccagcctgggcgacggagcgagactccgtctcaa 301
>RF00017;Metazoa_SRP;AC138417.3/10028-9739 9606:Homo sapiens (human)
Length = 290
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactc 57
||||| |||||||||||||| ||||||||||||||
Sbjct: 248 cactgcactccagcctgggcaacagagcaagactc 282
>RF00017;Metazoa_SRP;AADD01150925.1/5079-4789 9606:Homo sapiens
(human)
Length = 291
Score = 54.0 bits (27), Expect = 2e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 14 agatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||| |||| ||| |||||||||||| ||||||||| |||||| |||||||||
Sbjct: 96 agatcctgccgctgcactccagcctggccgacagagcgagactctctctcaaaaa 150
>RF00017;Metazoa_SRP;AADC01050253.1/3525-3807 9606:Homo sapiens
(human)
Length = 283
Score = 54.0 bits (27), Expect = 2e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacag 47
|||||||||| ||||||| | |||||| |||||||||||||| ||||
Sbjct: 219 ttgcagtgagctgagatcgtaccactgcactccagcctgggcaacag 265
>RF00017;Metazoa_SRP;ABBA01005882.1/5078-5354 9606:Homo sapiens
(human)
Length = 277
Score = 54.0 bits (27), Expect = 2e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||| ||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 105 ccactgcactccagcctgggtgacagagcaagaccctgtctaaaaaa 151
>RF00017;Metazoa_SRP;CABD01001092.1/68550-68840 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 291
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagac 55
|||||||||||||||||||||| ||| ||||||||
Sbjct: 247 gccactgtactccagcctgggcaacacagcaagac 281
>RF00017;Metazoa_SRP;CABD01034185.1/2201-1926 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 276
Score = 54.0 bits (27), Expect = 2e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcga 44
||||||||| ||||||| ||||| ||||||||||||| |||||
Sbjct: 85 tgcagtgagctgagatcgtgccattgtactccagcctaggcga 127
>RF00017;Metazoa_SRP;AANU01259087.1/12554-12337 9544:Macaca mulatta
(rhesus monkey)
Length = 218
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagac 55
|||||||||||||||||||||| ||| ||||||||
Sbjct: 174 gccactgtactccagcctgggcaacacagcaagac 208
>RF00017;Metazoa_SRP;AANU01283611.1/736-444 9544:Macaca mulatta
(rhesus monkey)
Length = 293
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 27 gtactccagcctgggcgacagagcaagactc 57
||||||||||||||| |||||||||||||||
Sbjct: 255 gtactccagcctgggtgacagagcaagactc 285
>RF00017;Metazoa_SRP;ABRT011128656.1/414-130 9478:Tarsius syrichta
(Philippine tarsier)
Length = 285
Score = 52.0 bits (26), Expect = 9e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagag 49
|||||||| |||||||||||||||||||||
Sbjct: 240 tgccactgcactccagcctgggcgacagag 269
>RF00017;Metazoa_SRP;ABRT010478877.1/2807-3098 9478:Tarsius syrichta
(Philippine tarsier)
Length = 292
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaaga 54
|||||||||||||||||||||| ||| |||||||
Sbjct: 248 gccactgtactccagcctgggcaacatagcaaga 281
>RF00017;Metazoa_SRP;ABGA01305071.1/12411-12129 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 52.0 bits (26), Expect = 9e-07
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| ||||||| || |||||||||||||||||| |||||| ||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcacaccagcctgggcgacagagagagactctgt 278
Query: 61 ct 62
||
Sbjct: 279 ct 280
>RF00017;Metazoa_SRP;AC186769.1/112170-112452 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 52.0 bits (26), Expect = 9e-07
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 2 tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggtc 61
|||||||||| ||||| ||||||| |||||||||||||| |||||| |||||| |||
Sbjct: 220 tgcagtgagtcgagattgcgccactgcactccagcctgggcaacagagtgagactctgtc 279
Query: 62 tc 63
||
Sbjct: 280 tc 281
>RF00017;Metazoa_SRP;AADA01042910.1/14375-14659 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 52.0 bits (26), Expect = 9e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagag 49
||||||||||||||||||||||| ||||||
Sbjct: 103 tgccactgtactccagcctgggcaacagag 132
>RF00017;Metazoa_SRP;AC067855.6/19413-19132 9606:Homo sapiens
(human)
Length = 282
Score = 52.0 bits (26), Expect = 9e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 218 ttgcagtgagccgaggtcatgccattgtactccagcctgggc 259
>RF00017;Metazoa_SRP;AADC01067688.1/354592-354302 9606:Homo sapiens
(human)
Length = 291
Score = 52.0 bits (26), Expect = 9e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagag 49
|||||||||||||||||||||| |||||||
Sbjct: 246 tgccactgtactccagcctgggtgacagag 275
>RF00017;Metazoa_SRP;AADB02328392.1/351-633 9606:Homo sapiens
(human)
Length = 283
Score = 52.0 bits (26), Expect = 9e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| ||||||| ||||||| ||||||||||||||
Sbjct: 219 ttgcagtgagccgagatcacgccactgcactccagcctgggc 260
>RF00017;Metazoa_SRP;AADB02323510.1/341-623 9606:Homo sapiens
(human)
Length = 283
Score = 52.0 bits (26), Expect = 9e-07
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgac-agagcaagactc 57
||||||| ||||||||||||||||| ||||||||||||
Sbjct: 239 gccactgcactccagcctgggcgacaagagcaagactc 276
>RF00017;Metazoa_SRP;AC024569.5/84086-83786 9606:Homo sapiens
(human)
Length = 301
Score = 52.0 bits (26), Expect = 9e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| ||||||| ||||| || ||||||||||||||
Sbjct: 218 ttgcagtgagctgagatcgtgccattgcactccagcctgggc 259
>RF00017;Metazoa_SRP;AL121657.4/48499-48802 9606:Homo sapiens
(human)
Length = 304
Score = 52.0 bits (26), Expect = 9e-07
Identities = 61/70 (87%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctggg-cgac-agagcaagactcg 58
|||||||||| ||| ||| ||||| || ||||||||||||| |||| | ||||||||||
Sbjct: 219 ttgcagtgagctgaaatcgtgccattgcactccagcctgggccgacaacagcaagactca 278
Query: 59 gtctcaaaaa 68
||||||||||
Sbjct: 279 gtctcaaaaa 288
>RF00017;Metazoa_SRP;ABBA01042561.1/12853-12565 9606:Homo sapiens
(human)
Length = 289
Score = 52.0 bits (26), Expect = 9e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 4 cagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 228 cagtgagcagagatcacaccactgcactccagcctgggtgacagagccagactc 281
>RF00017;Metazoa_SRP;CABD01281695.1/396-115 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 282
Score = 52.0 bits (26), Expect = 9e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||||||||| || ||||||| |||||| |||||||
Sbjct: 237 tgccactgtactccagcctcggtgacagagtgagactctgtctcaa 282
>RF00017;Metazoa_SRP;CU104666.2/121569-121843 9593:Gorilla gorilla
(Western Gorilla)
Length = 275
Score = 52.0 bits (26), Expect = 9e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
|||||||| |||||||||||||| ||||||| ||| || |||||||
Sbjct: 105 tgccactgcactccagcctgggcaacagagcgagattccgtctcaa 150
>RF00017;Metazoa_SRP;CABD01368992.2/4255-4538 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 284
Score = 52.0 bits (26), Expect = 9e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
||||||| || |||||||| |||||||||||||||||||||
Sbjct: 220 ttgcagtaagctgagatcacaccactgtactccagcctgggc 261
>RF00017;Metazoa_SRP;AANU01289442.1/905-623 9544:Macaca mulatta
(rhesus monkey)
Length = 283
Score = 52.0 bits (26), Expect = 9e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgaca 46
|||||||||| |||||| |||||||| ||||||||||||| ||||
Sbjct: 219 ttgcagtgagccgagatcttgccactgcactccagcctgggtgaca 264
>RF00017;Metazoa_SRP;AANU01278718.1/6535-6812 9544:Macaca mulatta
(rhesus monkey)
Length = 278
Score = 52.0 bits (26), Expect = 9e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggc 42
|||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 214 ttgcagtgagccgaggtcatgccattgtactccagcctgggc 255
>RF00017;Metazoa_SRP;AANU01249134.1/1906-1607 9544:Macaca mulatta
(rhesus monkey)
Length = 300
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaaga 54
|||||||||||||||||||||| ||| |||||||
Sbjct: 256 gccactgtactccagcctgggcaacacagcaaga 289
>RF00426;SCARNA15;ABDC01414620.1/1491-1629 30608:Microcebus
murinus (gray mouse lemur)
Length = 139
Score = 52.0 bits (26), Expect = 9e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 23 cactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||| |||||||||||||| ||||||||||||| |||| |||||
Sbjct: 8 cactgcactccagcctgggcagcagagcaagactctgtctaaaaaa 53
>RF00100;7SK;AANU01170049.1/1197-887 9544:Macaca mulatta (rhesus
monkey)
Length = 311
Score = 52.0 bits (26), Expect = 9e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 31 tccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||||||| ||||||| |||||| ||||||||||
Sbjct: 311 tccagcctgggctacagagcgagactccgtctcaaaaa 274
>RF00017;Metazoa_SRP;AAQR01713343.1/430-699 30611:Otolemur garnettii
(small-eared galago)
Length = 270
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||| ||| ||||||||||
Sbjct: 226 gccactgaactccagcctgggcaacatagcaagactc 262
>RF00017;Metazoa_SRP;AAQR01005955.1/921-622 30611:Otolemur garnettii
(small-eared galago)
Length = 300
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||| ||| ||||||||||
Sbjct: 258 gccactgcactccagcctgggcaacatagcaagactc 294
>RF00017;Metazoa_SRP;ABGA01344231.1/3825-4107 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagag 49
|||| ||||||||||||||||||||||||
Sbjct: 239 gccagtgtactccagcctgggcgacagag 267
>RF00017;Metazoa_SRP;ABGA01267726.1/8695-8413 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| |||||| ||| ||| |||||||||||||| ||||||| ||||||
Sbjct: 219 ttgcagtgagccgagatcgcgcctctgcactccagcctgggcaacagagcgagactc 275
>RF00017;Metazoa_SRP;ABGA01013480.1/3405-3125 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| || ||| |||||| |||||||||||||||| ||||||
Sbjct: 84 ttgcagtgagctgtgattgtgccaccgtactccagcctgggcaacagag 132
>RF00017;Metazoa_SRP;ABGA01262429.1/35408-35125 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||| |||||||||||||| |||||| |||||| ||
Sbjct: 220 ttgcagtgagccaagatcacaccactgcactccagcctgggcaacagagtgagactctgt 279
Query: 61 ctcaa 65
|||||
Sbjct: 280 ctcaa 284
>RF00017;Metazoa_SRP;ABGA01071768.1/1039-767 9601:Pongo abelii
(Sumatran orangutan)
Length = 273
Score = 50.1 bits (25), Expect = 3e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 15 gatcatgccactgtactccagcctgggcgacagagcaagac 55
||||||||||||| ||||||| |||||| ||| ||||||||
Sbjct: 98 gatcatgccactgcactccaggctgggcaacatagcaagac 138
>RF00017;Metazoa_SRP;ABGA01376699.1/6991-7274 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| ||||||||||| || ||||||||| |||| ||||||| ||||||
Sbjct: 220 ttgcagtgagccaagatcatgccattgcactccagcccgggcaacagagcgagactc 276
>RF00017;Metazoa_SRP;ABGA01385898.1/3538-3257 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||| ||| ||||||||||
Sbjct: 240 gccactgcactccagcctgggcaacatagcaagactc 276
>RF00017;Metazoa_SRP;ABGA01074417.1/3010-2728 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgac-agagcaagactcgg 59
|||||||||| ||||||||||| || |||||||||||||| || ||||||| |||| |
Sbjct: 219 ttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagcaaaactccg 278
Query: 60 tctca 64
|||||
Sbjct: 279 tctca 283
>RF00017;Metazoa_SRP;ABGA01177534.1/7970-7688 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactc 57
||||||||||||| |||||||||||||||
Sbjct: 247 actccagcctgggtgacagagcaagactc 275
>RF00017;Metazoa_SRP;ABGA01257745.1/5009-4729 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 50.1 bits (25), Expect = 3e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaaga 54
|||||| |||||||||||||| |||||||||||
Sbjct: 238 ccactgcactccagcctgggcaacagagcaaga 270
>RF00017;Metazoa_SRP;ABGA01001003.1/3322-3004 9601:Pongo abelii
(Sumatran orangutan)
Length = 319
Score = 50.1 bits (25), Expect = 3e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaag 53
|||||||||| ||||| |||||||| |||||||||||||| |||| |||||
Sbjct: 84 ttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagtgcaag 136
>RF00017;Metazoa_SRP;ABGA01097901.1/4116-4414 9601:Pongo abelii
(Sumatran orangutan)
Length = 299
Score = 50.1 bits (25), Expect = 3e-06
Identities = 37/40 (92%), Gaps = 2/40 (5%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaaaaa 68
||||||||||||||||||||| |||||| ||||||||||
Sbjct: 244 actccagcctgggcgacagagtaagact--gtctcaaaaa 281
>RF00017;Metazoa_SRP;ABGA01387451.1/4071-4372 9601:Pongo abelii
(Sumatran orangutan)
Length = 302
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||| |||||||| ||||||||| |||||||||||
Sbjct: 238 ttgcagtgagccgagattttgccactgcactccagcccgggcgacagag 286
>RF00017;Metazoa_SRP;ABGA01024319.1/3420-3703 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||| || ||||||||||||| ||||||| |||||| ||
Sbjct: 220 ttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagtgagactctgt 279
Query: 61 ctcaa 65
|||||
Sbjct: 280 ctcaa 284
>RF00017;Metazoa_SRP;ABGA01146174.1/1083-800 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||||| |||||| |||||||||||||| ||||||
Sbjct: 220 ttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagag 268
>RF00017;Metazoa_SRP;ABGA01386025.1/3099-2818 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| |||||||||||||||||| ||| ||||||
Sbjct: 238 gccactgcactccagcctgggcgacacagcgagactc 274
>RF00017;Metazoa_SRP;AADA01084600.1/2717-3000 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||| ||| ||||||| |||||| |||||||||||||| |||||| |||||||
Sbjct: 220 ttgcagagagctgagatcgcaccactgcactccagcctgggcaacagagtaagactc 276
>RF00017;Metazoa_SRP;AACZ02043925.1/33237-32935 9598:Pan troglodytes
(chimpanzee)
Length = 303
Score = 50.1 bits (25), Expect = 3e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 22 ccactgtactccagcctgggcgacagagcaagactcggtct 62
|||||| ||||||||||||| |||||||||| |||| ||||
Sbjct: 241 ccactgcactccagcctgggagacagagcaaaactctgtct 281
>RF00017;Metazoa_SRP;AACZ02167687.1/15015-14734 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 24 actgtactccagcctgggcgacagagcaagact 56
|||| |||||||||||||| |||||||||||||
Sbjct: 243 actgcactccagcctgggcaacagagcaagact 275
>RF00017;Metazoa_SRP;AACZ02075603.1/13997-14269 9598:Pan troglodytes
(chimpanzee)
Length = 273
Score = 50.1 bits (25), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| ||||||||||||| ||||||| |||||| |||||||
Sbjct: 229 gccactgcactccagcctgggtgacagagtgagactctgtctcaa 273
>RF00017;Metazoa_SRP;AADA01011428.1/7525-7243 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||| |||||| |||||||| |||||||
Sbjct: 247 actccagcctgggtgacagaacaagactccgtctcaa 283
>RF00017;Metazoa_SRP;AADA01182454.1/15096-15380 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 50.1 bits (25), Expect = 3e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 13 gagatcatgccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| ||||||| ||||||||||||| ||||| | |||||| |||||||
Sbjct: 233 gagatcacgccactgaactccagcctgggtgacagtacgagactctgtctcaa 285
>RF00017;Metazoa_SRP;AACZ02003140.1/751-470 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| |||||| |||||| |||||||||||||| |||||| |||||| ||
Sbjct: 218 ttgcagtgagccaagatcacaccactgcactccagcctgggcaacagagtgagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AC216066.3/52272-52554 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| ||||||| | | ||| |||||||||||||| |||||| |||||| ||
Sbjct: 219 ttgcagtgagccgagatcacgacgctgcactccagcctgggcaacagagtgagactctgt 278
Query: 61 ctcaa 65
|||||
Sbjct: 279 ctcaa 283
>RF00017;Metazoa_SRP;AACZ02094252.1/1604-1885 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactcggt 60
|||||||||| | ||||| |||||| |||||| |||||||||||||| |||||| ||
Sbjct: 218 ttgcagtgagctaagatcgcaccactgcactccaacctgggcgacagagtgagactctgt 277
Query: 61 ctcaa 65
|||||
Sbjct: 278 ctcaa 282
>RF00017;Metazoa_SRP;AADA01008014.1/760-478 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaa 65
||||||||||||| ||||||| ||||||| |||||||
Sbjct: 247 actccagcctgggtgacagagtaagactctgtctcaa 283
>RF00017;Metazoa_SRP;AACZ02040322.1/19480-19196 9598:Pan troglodytes
(chimpanzee)
Length = 285
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactc 57
|||||||||||||| ||||||||||||||
Sbjct: 249 actccagcctgggctacagagcaagactc 277
>RF00017;Metazoa_SRP;AACZ02168225.1/14114-13831 9598:Pan troglodytes
(chimpanzee)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagag 49
|||||||||||||||||||||| ||||||
Sbjct: 240 gccactgtactccagcctgggctacagag 268
>RF00017;Metazoa_SRP;AACZ02116269.1/1052-775 9598:Pan troglodytes
(chimpanzee)
Length = 278
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||||| |||||| |||||||||||||| ||||||
Sbjct: 84 ttgcagtgagccgagatcactccactgcactccagcctgggccacagag 132
>RF00017;Metazoa_SRP;AACZ02150153.1/41116-40818 9598:Pan troglodytes
(chimpanzee)
Length = 299
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||||| |||| || |||||||||||||||| ||||
Sbjct: 216 ttgcagtgagccgagatcacgccattgcactccagcctgggcgatagag 264
>RF00017;Metazoa_SRP;AADC01149088.1/2161-1880 9606:Homo sapiens
(human)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactcggtctcaa 65
|||||||||||||| ||||||| |||||| |||||||
Sbjct: 246 actccagcctgggcaacagagcgagactccgtctcaa 282
>RF00017;Metazoa_SRP;AADD01032066.1/32508-32229 9606:Homo sapiens
(human)
Length = 280
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 20 tgccactgtactccagcctgggcgacagagcaagactcggtctcaaaaa 68
|||||||| |||| |||||| | ||||||||||||||| | ||||||||
Sbjct: 103 tgccactgcactctagcctgagtgacagagcaagactctgactcaaaaa 151
>RF00017;Metazoa_SRP;AADB02012954.1/70605-70887 9606:Homo sapiens
(human)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||||| || || ||| ||||||||||||| ||||||
Sbjct: 219 ttgcagtgagctgagatcctgtcagtgttctccagcctgggcaacagag 267
>RF00017;Metazoa_SRP;AADB02019950.1/111638-111926 9606:Homo sapiens
(human)
Length = 289
Score = 50.1 bits (25), Expect = 3e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
||||||| || ||||||||||| ||||||||||||||
Sbjct: 245 gccactgcaccccagcctgggcaacagagcaagactc 281
>RF00017;Metazoa_SRP;ABBA01074506.1/131712-131995 9606:Homo sapiens
(human)
Length = 284
Score = 50.1 bits (25), Expect = 3e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 21 gccactgtactccagcctgggcgacagagcaagactcggtctcaa 65
||||||| |||||||||||||| |||||| |||||| |||||||
Sbjct: 240 gccactgaactccagcctgggcaacagagtgagactctgtctcaa 284
>RF00017;Metazoa_SRP;ABBA01058676.1/46559-46844 9606:Homo sapiens
(human)
Length = 286
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 29 actccagcctgggcgacagagcaagactc 57
||||||||||||||||||||| |||||||
Sbjct: 250 actccagcctgggcgacagagtaagactc 278
>RF00017;Metazoa_SRP;ABBA01016899.1/154829-155109 9606:Homo sapiens
(human)
Length = 281
Score = 50.1 bits (25), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||| ||||| ||||||| ||||||| |||||||||||||| | ||||| ||||||
Sbjct: 217 ttgccgtgagctgagatcgcgccactgcactccagcctgggcaaaagagcgagactc 273
>RF00017;Metazoa_SRP;AP001631.1/97084-96803 9606:Homo sapiens
(human)
Length = 282
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| ||||||| |||| ||||||||||||||| |||||||
Sbjct: 218 ttgcagtgagctgagatctcgccattgtactccagcctggatgacagag 266
>RF00017;Metazoa_SRP;AL590282.6/19296-18996 9606:Homo sapiens
(human)
Length = 301
Score = 50.1 bits (25), Expect = 3e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
|||||||||| ||||||| |||| || ||||||||||||| ||||||| ||||||
Sbjct: 217 ttgcagtgagccgagatcacgccattgcactccagcctggggaacagagcgagactc 273
>RF00017;Metazoa_SRP;AADB02013304.1/59422-59704 9606:Homo sapiens
(human)
Length = 283
Score = 50.1 bits (25), Expect = 3e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1 ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagag 49
|||||||||| |||||| ||||||| |||||||||||||| ||||||
Sbjct: 219 ttgcagtgagccgagatcgcgccactgcactccagcctgggctacagag 267
