miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q6ZSR6|YP007_HUMAN Putative uncharacterized protein FLJ45256
OS=Homo sapiens PE=2 SV=3
Length = 202
Score = 52.4 bits (124), Expect = 9e-07
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Frame = +1
Query: 13 VETGFCHIAQAGFK-----HQICLVGLPKWWDYRHEPPRLAKPFFFN 138
VETGFC + QAG + + + LPK WDYRHEPPRLA FN
Sbjct: 3 VETGFCRVGQAGLELLSSSDKAAGLDLPKCWDYRHEPPRLAPLLIFN 49
>sp|Q96N38|ZN714_HUMAN Zinc finger protein 714 OS=Homo sapiens
GN=ZNF714 PE=2 SV=1
Length = 555
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = -1
Query: 130 RKV*PGAVAHVCNPTT---LGDQPGRFGV*NQPVQCGKTLSLQK 8
RK+ G VAH CNP T LG+Q R GV +QP Q GKT SL K
Sbjct: 500 RKIQQGMVAHACNPNTLRGLGEQIARSGVQDQPGQHGKTPSLLK 543
>sp|Q99959|PKP2_HUMAN Plakophilin-2 OS=Homo sapiens GN=PKP2 PE=1
SV=2
Length = 881
Score = 43.1 bits (100), Expect = 6e-04
Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -1
Query: 118 PGAVAHVCNPTTLGDQPGRF---GV*NQPVQCGKTLSLQKN 5
PGAVAH CNP+TLG Q GR GV +QP Q G +L N
Sbjct: 472 PGAVAHACNPSTLGGQGGRITRSGVRDQPDQHGLLWNLSSN 512
