miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00017;Metazoa_SRP;AACZ02132279.1/8599-8317 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| || ||||||||||||| ||||||| ||||||||| |||| |||||
Sbjct: 274 agtctcgctctgtcgcccaggctggagtgcagtggtgcaatcttggctcactgcagcctc 215
Query: 71 cacctcttgggttcgggtgattctcctg 98
|||||| ||||||| | ||||||||||
Sbjct: 214 cacctcctgggttccagcgattctcctg 187
>RF00017;Metazoa_SRP;AADA01162279.1/17288-17006 9598:Pan troglodytes
(chimpanzee)
Length = 283
Score = 69.9 bits (35), Expect = 6e-12
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||||| |||||||||||||||| ||||
Sbjct: 274 agtctcactctgttgcccaggctggagtgcagtggtgtggtcttggctcgctgcaacctc 215
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
|||| ||||||| | ||||||||||||
Sbjct: 214 tgcctcctgggttcaagcaattctcctgcct 184
>RF00017;Metazoa_SRP;AL357500.17/74632-74351 9606:Homo sapiens
(human)
Length = 282
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||||| | ||||||||| |||| ||||
Sbjct: 273 agtctcgctctgttgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctc 214
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
| |||| ||||||| | ||||||||||||
Sbjct: 213 cgcctcctgggttcctgccattctcctgcct 183
>RF00017;Metazoa_SRP;ABGA01172272.1/9412-9694 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 60.0 bits (30), Expect = 6e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||||| ||||||||| |||| |||||||||| ||||||| |
Sbjct: 257 caggctggagtgcagtggtgcaatcttggctcactgcaacctccacctcctgggttcaag 198
Query: 88 tgattctcctgcct 101
||||||||||||
Sbjct: 197 caattctcctgcct 184
>RF00017;Metazoa_SRP;ABGA01146174.1/1083-800 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 60.0 bits (30), Expect = 6e-09
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 12 gtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctcc 71
||||| ||||| ||| ||||||||||||| |||||||| ||| |||| |||| ||||
Sbjct: 274 gtctccctctgttgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctct 215
Query: 72 acctcttgggttcgggtgattctcctgcct 101
|||| ||||||| |||||||||||||||
Sbjct: 214 gcctcctgggttcaagtgattctcctgcct 185
>RF00017;Metazoa_SRP;ABGA01303498.1/2745-2447 9601:Pongo abelii
(Sumatran orangutan)
Length = 299
Score = 58.0 bits (29), Expect = 2e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 12 gtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctcc 71
||||||||||| ||| ||||||||||||| ||| |||| ||| ||||| |||| |||||
Sbjct: 270 gtctctctctgttgcccaggctggagtgcagtgttgcgatctcggctcactgcaacctcc 211
Query: 72 acctcttgggttc 84
|||| |||||||
Sbjct: 210 gcctcctgggttc 198
>RF00017;Metazoa_SRP;ABGA01162754.1/15088-15368 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctc 76
||||||||||||| |||||||| ||||||||| |||| ||||||||||
Sbjct: 122 caggctggagtgcagtggtgcgatcttggctcactgcaacctccacctc 74
>RF00017;Metazoa_SRP;AC079176.15/137643-137361 9606:Homo sapiens
(human)
Length = 283
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttc 84
||||||||||||| |||||||| |||| |||| |||| |||||||||| |||||||
Sbjct: 257 caggctggagtgcagtggtgcgatcttagctcactgcaacctccacctcctgggttc 201
>RF00017;Metazoa_SRP;AADA01312846.1/6480-6783 9598:Pan troglodytes
(chimpanzee)
Length = 304
Score = 56.0 bits (28), Expect = 9e-08
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 18 ctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctct 77
||||| ||| ||||||||||||| |||||| ||||||||| |||| |||| ||||
Sbjct: 268 ctctgttgcccaggctggagtgcaatggtgcaatcttggctcactgcaacctctgcctcc 209
Query: 78 tgggttcgggtgattctcctgcct 101
||||||| |||||||||||||||
Sbjct: 208 tgggttcaagtgattctcctgcct 185
>RF00017;Metazoa_SRP;ABGA01310580.1/20280-19991 9601:Pongo abelii
(Sumatran orangutan)
Length = 290
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 31 gctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcgggtga 90
|||||||||| |||| ||||||||||||| |||| |||||||||| || ||| | ||
Sbjct: 119 gctggagtgcagtggcgcggtcttggctcactgcaacctccacctcccggattcaagcga 60
Query: 91 ttctcctgcct 101
|||||||||||
Sbjct: 59 ttctcctgcct 49
>RF00017;Metazoa_SRP;AC186769.1/112170-112452 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 54.0 bits (27), Expect = 4e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||| || ||| | ||| |||| |||||
Sbjct: 274 agtctcactctgttgcccaggctggagtgcagtggcgcaatctcgactcactgcagcctc 215
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
| |||| ||||||| |||||| ||||||||
Sbjct: 214 cgcctcctgggttcaagtgattttcctgcct 184
>RF00017;Metazoa_SRP;AACZ02003140.1/751-470 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 54.0 bits (27), Expect = 4e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||||| | ||||||||| |||| ||||
Sbjct: 273 agtctcactctgttgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctc 214
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
|||| ||||||| | ||||||||||||
Sbjct: 213 tgcctcctgggttcctgccattctcctgcct 183
>RF00017;Metazoa_SRP;CABD01782015.1/385-99 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 287
Score = 54.0 bits (27), Expect = 4e-07
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||||| ||||||||| |||| ||||
Sbjct: 139 agtctcgctctgttgcccaggctggagtgcaatggtgcaatcttggctcactgcaacctc 80
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
|||||| | ||||| | ||||||||||||
Sbjct: 79 cacctcctaggttcaagaaattctcctgcct 49
>RF00017;Metazoa_SRP;ABGA01283676.1/8000-7718 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
|||||||| |||| ||| ||| ||||||||| |||| ||||| |||| ||||||| |
Sbjct: 257 caggctggggtgcaatggcgcgatcttggctcactgcaacctccgcctcctgggttccag 198
Query: 88 tgattctcctgcct 101
||||||||||||||
Sbjct: 197 tgattctcctgcct 184
>RF00017;Metazoa_SRP;ABGA01262429.1/35408-35125 9601:Pongo abelii
(Sumatran orangutan)
Length = 284
Score = 52.0 bits (26), Expect = 1e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgc 64
|||||| ||||| ||| ||||||||||||| |||||| | ||||||||| ||||
Sbjct: 275 agtctcactctgttgcccaggctggagtgcagtggtgtgatcttggctcactgc 222
>RF00017;Metazoa_SRP;ABGA01230818.1/8679-8961 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| |||| |||||| ||| |||| ||||| |||| ||||||| ||
Sbjct: 257 caggctggagtgcaatggtatggtcttatctcactgcaacctccgcctcctgggttcagg 198
Query: 88 tgattctcctgcct 101
||||||||||||||
Sbjct: 197 tgattctcctgcct 184
>RF00017;Metazoa_SRP;ABGA01001003.1/3322-3004 9601:Pongo abelii
(Sumatran orangutan)
Length = 319
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| |||| || ||||||||| |||| |||||||||| |||||| |
Sbjct: 122 caggctggagtgcagtggcacgatcttggctcactgcaacctccacctcccgggttcaag 63
Query: 88 tgattctcctgcct 101
|||||||||||||
Sbjct: 62 agattctcctgcct 49
>RF00017;Metazoa_SRP;AACZ02047922.1/154838-155139 9598:Pan
troglodytes (chimpanzee)
Length = 302
Score = 52.0 bits (26), Expect = 1e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 24 tgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggtt 83
||||||||||||||||| |||| || ||| ||||| |||| |||||||||| |||||
Sbjct: 126 tgctcaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcccgggtt 67
Query: 84 cgggtgattctcctgcct 101
| | |||||||||||||
Sbjct: 66 caagagattctcctgcct 49
>RF00017;Metazoa_SRP;AACZ02053905.1/141850-141546 9598:Pan
troglodytes (chimpanzee)
Length = 305
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| | || || ||||||||| ||||| ||||
Sbjct: 135 agtctcactctgttgcccaggctggagtgcagcggcgctatcttggctcactgcgacctc 76
Query: 71 cacctc 76
||||||
Sbjct: 75 cacctc 70
>RF00017;Metazoa_SRP;AADD01056510.1/4188-4470 9606:Homo sapiens
(human)
Length = 283
Score = 52.0 bits (26), Expect = 1e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||| ||| ||||||||| |||| ||||| |||| |||||| |
Sbjct: 257 caggctggagtgcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaag 198
Query: 88 tgattctcctgcct 101
||||||||||||||
Sbjct: 197 tgattctcctgcct 184
>RF00017;Metazoa_SRP;AADB02035138.1/25911-26193 9606:Homo sapiens
(human)
Length = 283
Score = 50.1 bits (25), Expect = 6e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttc 84
||||||||||||| |||||||| ||| |||| |||| |||||||||| |||||||
Sbjct: 257 caggctggagtgcagtggtgcgatctcagctcactgcaacctccacctcctgggttc 201
>RF00017;Metazoa_SRP;AACZ02050168.1/4927-4631 9598:Pan troglodytes
(chimpanzee)
Length = 297
Score = 48.1 bits (24), Expect = 2e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 30 ggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcgggtg 89
||||||||||| |||| ||| ||| ||||| |||| ||||| |||| ||||||| | |
Sbjct: 255 ggctggagtgcagtggcgcgatctcggctcactgcaacctccccctcctgggttcaagcg 196
Query: 90 attctcctgcct 101
||||||||||||
Sbjct: 195 attctcctgcct 184
>RF00017;Metazoa_SRP;AC008040.7/187594-187869 9606:Homo sapiens
(human)
Length = 276
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 13 tctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgc 64
|||| ||||| ||| ||||||||||||| | |||||| ||||||||| ||||
Sbjct: 265 tctccctctgttgcccaggctggagtgcagcggtgcgatcttggctcactgc 214
>RF00017;Metazoa_SRP;ABGA01201767.1/1572-1845 9601:Pongo abelii
(Sumatran orangutan)
Length = 274
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcg 49
|||||| ||||| ||| ||||||||||||| ||||||||
Sbjct: 265 agtctcgctctgttgcccaggctggagtgcagtggtgcg 227
>RF00017;Metazoa_SRP;ABGA01273660.1/24353-24634 9601:Pongo abelii
(Sumatran orangutan)
Length = 282
Score = 46.1 bits (23), Expect = 9e-05
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 24 tgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggtt 83
||||||||||||||||| |||| | | ||||||||| |||| |||| |||| ||||||
Sbjct: 262 tgctcaggctggagtgcagtggcgtgatcttggctcactgcaacctctgcctcctgggtt 203
Query: 84 cgggtgattctcctg 98
| | ||||||||||
Sbjct: 202 caagcgattctcctg 188
>RF00017;Metazoa_SRP;ABGA01257745.1/5009-4729 9601:Pongo abelii
(Sumatran orangutan)
Length = 281
Score = 46.1 bits (23), Expect = 9e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 18 ctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgc 64
||||| ||| ||||||||||||| ||||||| ||||||||| ||||
Sbjct: 265 ctctgttgcccaggctggagtgcagtggtgcaatcttggctcactgc 219
>RF00017;Metazoa_SRP;ABGA01015944.1/10578-10296 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 46.1 bits (23), Expect = 9e-05
Identities = 74/91 (81%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||| || ||| ||||| |||| ||||
Sbjct: 274 agtctcactctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctc 215
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
|||| ||||||| | |||||||||||||
Sbjct: 214 tgcctcctgggttcaagcgattctcctgcct 184
>RF00017;Metazoa_SRP;AL359385.28/37801-37507 9606:Homo sapiens
(human)
Length = 295
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 12 gtctctctctgctgctcaggctggagtgctgtggtgcgg 50
||||| ||||| ||| ||||||||||||| |||||||||
Sbjct: 285 gtctcgctctgttgcccaggctggagtgcagtggtgcgg 247
>RF00017;Metazoa_SRP;AADB02020447.1/517759-517491 9606:Homo sapiens
(human)
Length = 269
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
||||||||||||| || |||| ||||||||| ||||||||||
Sbjct: 122 caggctggagtgcagtagtgcaatcttggctcactgcggcctc 80
>RF00017;Metazoa_SRP;AADC01071795.1/582-864 9606:Homo sapiens
(human)
Length = 283
Score = 46.1 bits (23), Expect = 9e-05
Identities = 74/91 (81%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| |||| || ||||||||| |||| ||||
Sbjct: 274 agtctcactctgttgcccaggctggagtgcagtggagcaatcttggctcactgcaacctc 215
Query: 71 cacctcttgggttcgggtgattctcctgcct 101
|||| ||||||| | ||||||||||||
Sbjct: 214 tgcctcctgggttcaagcaattctcctgcct 184
>RF00017;Metazoa_SRP;ABGA01101565.1/843-1127 9601:Pongo abelii
(Sumatran orangutan)
Length = 285
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||| ||| | ||||||| |||||||||| |||| |||| |||| ||||||| |
Sbjct: 259 caggctgaagtacagtggtgcagtcttggctcactgcaacctctgcctcctgggttcaag 200
Query: 88 tgattctcctgcct 101
|||||||||||||
Sbjct: 199 cgattctcctgcct 186
>RF00017;Metazoa_SRP;ABGA01040313.1/34253-33971 9601:Pongo abelii
(Sumatran orangutan)
Length = 283
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 68 ctccacctcttgggttcgggtgattctcctgcct 101
|||| |||| ||||||| ||||||||||||||||
Sbjct: 217 ctccgcctcctgggttcaggtgattctcctgcct 184
>RF00017;Metazoa_SRP;ABGA01291646.1/18820-19110 9601:Pongo abelii
(Sumatran orangutan)
Length = 291
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||| || ||||||||| |||| |||| |||| || |||| |
Sbjct: 265 caggctggagtgcagtggtacgatcttggctcactgcaacctctgcctcctgagttcaag 206
Query: 88 tgattctcctgcct 101
||||| ||||||||
Sbjct: 205 tgattttcctgcct 192
>RF00017;Metazoa_SRP;AACZ02080787.1/7638-7919 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgc 48
|||||| ||||| ||| ||||||||||||| |||||||
Sbjct: 139 agtctcgctctgttgcccaggctggagtgcagtggtgc 102
>RF00017;Metazoa_SRP;AACZ02150364.1/46624-46905 9598:Pan troglodytes
(chimpanzee)
Length = 282
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| |||||||| ||| ||||| |||| |||| |||| ||||||| |
Sbjct: 256 caggctggagtgcagtggtgcgatctcggctcactgcaacctctgcctcctgggttcacg 197
Query: 88 tgattctcctgcct 101
|| |||| ||||||
Sbjct: 196 tggttcttctgcct 183
>RF00017;Metazoa_SRP;AC187610.3/160817-160538 9598:Pan troglodytes
(chimpanzee)
Length = 280
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||||| ||||||||| | || |||| |||| ||||||| |
Sbjct: 254 caggctggagtgcaatggtgcgatcttggctcaccgcaacctctgcctcctgggttccag 195
Query: 88 tgattctcctgcct 101
|||||||||||||
Sbjct: 194 cgattctcctgcct 181
>RF00017;Metazoa_SRP;AACZ02114187.1/25615-25895 9598:Pan troglodytes
(chimpanzee)
Length = 281
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||||| ||| |||| |||| ||||| |||| ||||||| |
Sbjct: 257 caggctggagtgcagtggtgcaatctcagctcactgcagcctctgcctcctgggttccag 198
Query: 88 tgattctcctgcct 101
|||||||||||||
Sbjct: 197 cgattctcctgcct 184
>RF00017;Metazoa_SRP;ABBA01057579.1/19536-19815 9606:Homo sapiens
(human)
Length = 280
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||||| ||| ||||| | || |||| |||| ||||||| |
Sbjct: 254 caggctggagtgcaatggtgcgatctcggctcaccgcaacctctgcctcctgggttccag 195
Query: 88 tgattctcctgcct 101
||||||||||||||
Sbjct: 194 tgattctcctgcct 181
>RF00017;Metazoa_SRP;ABBA01045915.1/13370-13653 9606:Homo sapiens
(human)
Length = 284
Score = 44.1 bits (22), Expect = 4e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgc 64
|||||| ||||| |||||||||||||||| |||||| | ||| ||||| ||||
Sbjct: 275 agtctcactctgttgctcaggctggagtgtagtggtgtgatctcggctcactgc 222
>RF00017;Metazoa_SRP;ABBA01074322.1/20848-20555 9606:Homo sapiens
(human)
Length = 294
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| |||| || ||| ||||| |||| |||||||||| |||||| |
Sbjct: 122 caggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaag 63
Query: 88 tgattctcctgcct 101
|||||||||||||
Sbjct: 62 agattctcctgcct 49
>RF00017;Metazoa_SRP;AADB02013261.1/2261994-2261712 9606:Homo
sapiens (human)
Length = 283
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||||| ||| ||||| |||| |||| |||| ||||||| |
Sbjct: 257 caggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcctgggttcaag 198
Query: 88 tgattctcctgcct 101
|||||||||||||
Sbjct: 197 cgattctcctgcct 184
>RF00017;Metazoa_SRP;AADC01087178.1/2360-2079 9606:Homo sapiens
(human)
Length = 282
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| |||||||| ||| ||||| |||| |||| |||| ||||||| |
Sbjct: 256 caggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcctgggttcaag 197
Query: 88 tgattctcctgcct 101
||||||||||||
Sbjct: 196 caattctcctgcct 183
>RF00017;Metazoa_SRP;AADC01046850.1/136-443 9606:Homo sapiens
(human)
Length = 308
Score = 44.1 bits (22), Expect = 4e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgcggtcttggctcgctgcggcctc 70
|||||| ||||| ||| ||||||||||||| | || || ||||||||| |||| ||||
Sbjct: 135 agtctcactctgttgcccaggctggagtgcagcggcgctatcttggctcactgcaacctc 76
Query: 71 cacctc 76
||||||
Sbjct: 75 cacctc 70
>RF00017;Metazoa_SRP;AANU01175737.1/2327-2596 9544:Macaca mulatta
(rhesus monkey)
Length = 270
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 agtctctctctgctgctcaggctggagtgctgtggtgc 48
|||||| ||||| ||| ||||||||||||| |||||||
Sbjct: 261 agtctcactctgttgcccaggctggagtgcagtggtgc 224
>RF00017;Metazoa_SRP;AANU01122629.1/164-462 9544:Macaca mulatta
(rhesus monkey)
Length = 299
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 12 gtctctctctgctgctcaggctggagtgctgtgg 45
|||||||| |||||| ||||||||||||| ||||
Sbjct: 289 gtctctctatgctgcccaggctggagtgcagtgg 256
>RF00017;Metazoa_SRP;AANU01194555.1/9029-8746 9544:Macaca mulatta
(rhesus monkey)
Length = 284
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 28 caggctggagtgctgtggtgcggtcttggctcgctgcggcctccacctcttgggttcggg 87
||||||||||||| ||||||| ||| ||||| ||| ||||| |||| || |||| |
Sbjct: 258 caggctggagtgcagtggtgcaatctcggctcactgaagcctctgcctcctgcgttcaag 199
Query: 88 tgattctcctgcct 101
||||||||||||||
Sbjct: 198 tgattctcctgcct 185
