miRNEST 2.0, an integrative microRNA resource :: BLAST
>51600_ptc-miR156j:pmrd
Length = 100
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatcact 156
|||||||||||||||| |||||||||||||||
Sbjct: 65 tcctttgtgctctctatgcttctgtcatcact 96
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcaca 32
>48531_gma-miR156d:pmrd
Length = 151
Score = 56.0 bits (28), Expect = 9e-09
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 115 tgcattttattcctttgtgctctctaagcttctgtcatcactcttcagcctc 166
||||| ||| |||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctgtcatcac-cttcagcctc 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 17 gttgttgacagaagatagagagcaca 42
>48695_mtr-miR156e:pmrd
Length = 172
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatcac 155
|||||||||||||||| ||||||||||||||
Sbjct: 141 tcctttgtgctctctatgcttctgtcatcac 171
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 2 gttgttgacagaagatagagagcaca 27
>54774_vvi-miR156i:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcaca 32
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatcac 155
|||||||||||||||| |||||||||||||
Sbjct: 64 tcctttgtgctctctattcttctgtcatcac 94
>54772_vvi-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcaca 32
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatcac 155
|||||||||||||||| |||||||||||||
Sbjct: 64 tcctttgtgctctctagacttctgtcatcac 94
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatca 154
|||||||||||||||| |||||||||||||
Sbjct: 57 tcctttgtgctctctatgcttctgtcatca 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcaca 40
||||||||||||||||||||||||
Sbjct: 1 tgttgacagaagatagagagcaca 24
>51599_ptc-miR156i:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcaca 32
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatcac 155
|||||||||||||||| ||||||| ||||||
Sbjct: 65 tcctttgtgctctctatgcttctgccatcac 95
>51597_ptc-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcaca 32
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 112 aattgcattttattcctttgtgctctctaagcttctgtcatcac 155
|||||||| | | |||||||||||||||| |||||||||||||
Sbjct: 55 aattgcatctcactcctttgtgctctctagtcttctgtcatcac 98
>48631_gra-miR157b:pmrd
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 1 gttgttgacagaagatagagagcaca 26
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatca 154
|||||||||||||||| |||||||||||||
Sbjct: 60 tcctttgtgctctctatgcttctgtcatca 89
>48630_gra-miR157a:pmrd
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcaca 40
||||||||||||||||||||||||||
Sbjct: 1 gttgttgacagaagatagagagcaca 26
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatcac 155
||||||||||||| || ||||||||||||||
Sbjct: 70 tcctttgtgctctttatgcttctgtcatcac 100
>46927_ath-miR157d:pmrd
Length = 221
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 122 tattcctttgtgctctctaagcttctgtcatcac 155
||||||| ||||||||||| ||||||||||||||
Sbjct: 164 tattcctatgtgctctctatgcttctgtcatcac 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcac 39
|||| ||||||||||||||||||||
Sbjct: 19 gttgctgacagaagatagagagcac 43
>46925_ath-miR157b:pmrd
Length = 132
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 114 ttgcattttattcctttgtgctctctaagcttctgtcatcac 155
|||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 71 ttgcatcttactcctttgtgctctctagccttctgtcatcac 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcaca 40
||||||||||||||||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>46924_ath-miR157a:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 114 ttgcattttattcctttgtgctctctaagcttctgtcatcac 155
|||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 56 ttgcatcttactcctttgtgctctctagccttctgtcatcac 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcaca 40
||||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>54771_vvi-miR156f:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcacaa 41
|||||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaa 33
>48696_mtr-miR156f:pmrd
Length = 94
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 ttgttgacagaagatagagagcaca 40
|||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcaca 27
>48530_gma-miR156c:pmrd
Length = 185
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcacaa 41
|||||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaa 168
>48393_bra-miR157a:pmrd
Length = 149
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcac 39
|||||||||||||||||||||||||
Sbjct: 10 gttgttgacagaagatagagagcac 34
>48384_bol-miR157a:pmrd
Length = 106
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcac 39
|||||||||||||||||||||||||
Sbjct: 2 gttgttgacagaagatagagagcac 26
Score = 40.1 bits (20), Expect = 5e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Minus
Query: 19 ttgacagaag-atagagagcacaaaaga 45
|||||||||| |||||||||||||||||
Sbjct: 102 ttgacagaagtatagagagcacaaaaga 75
>48338_bna-miR156c:pmrd
Length = 155
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcac 39
|||||||||||||||||||||||||
Sbjct: 14 gttgttgacagaagatagagagcac 38
Score = 40.1 bits (20), Expect = 5e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Minus
Query: 19 ttgacagaag-atagagagcacaaaaga 45
|||||||||| |||||||||||||||||
Sbjct: 138 ttgacagaagtatagagagcacaaaaga 111
>48337_bna-miR156b:pmrd
Length = 208
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcac 39
|||||||||||||||||||||||||
Sbjct: 21 gttgttgacagaagatagagagcac 45
>46926_ath-miR157c:pmrd
Length = 217
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttgttgacagaagatagagagcac 39
|||||||||||||||||||||||||
Sbjct: 20 gttgttgacagaagatagagagcac 44
>46862_aqc-miR156b:pmrd
Length = 83
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatc 153
|||||||||||||||| ||||||||||||
Sbjct: 55 tcctttgtgctctctatgcttctgtcatc 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgacagaagatagagagcaca 40
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
>51598_ptc-miR156h:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 112 aattgcattttattcctttgtgctctctaagcttctgtcatcac 155
|||||||| | | |||||||||||||||| |||||||||||||
Sbjct: 55 aattgcatctcactcctttgtgctctctagtcttctgtcatcac 98
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcac 39
|||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcac 31
>48697_mtr-miR156h:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcaca 40
||||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 123 attcctttgtgctctctaagcttctgtcatcac 155
||||||||||||||| || |||||||||||||
Sbjct: 61 attcctttgtgctctttattcttctgtcatcac 93
>48675_lja-miR157a:pmrd
Length = 58
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcacaa 41
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcacaa 23
>48532_gma-miR156e:pmrd
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcac 39
|||||||||||||||||||||||
Sbjct: 19 tgttgacagaagatagagagcac 41
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcatca 154
|||||||||||||||| ||||||||||||
Sbjct: 78 tcctttgtgctctctagtcttctgtcatca 107
>54532_sly-miR156a:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 123 attcctttgtgctctctaagcttctgtcat 152
|||| ||||||||||||| |||||||||||
Sbjct: 71 attcatttgtgctctctatgcttctgtcat 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcac 39
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 gttgacagaagatagagagcac 39
||||||||||||||||||||||
Sbjct: 1 gttgacagaagatagagagcac 22
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 112 aattgcattttattcctttgtgctctctaagcttctgtcatc 153
|||||||| | | |||||||||||||||| |||||||||||
Sbjct: 46 aattgcatctcactcctttgtgctctctagtcttctgtcatc 87
>51552_pta-miR156b:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgacagaagatagagagcacaa 41
||||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcacaa 24
>48790_nta-miR157:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcaca 40
||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcaca 22
>48698_mtr-miR157:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 112 aattgcattttatt-cctttgtgctctctaagcttctgtcat 152
|||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 70 aattgcatttcatttcctttgtgctctctagacttctgtcat 111
>48642_han-miR157a:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcaca 40
||||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcaca 22
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 125 tcctttgtgctctctaagcttctgtcat 152
||||| |||||||||| |||||||||||
Sbjct: 59 tccttcgtgctctctatgcttctgtcat 86
>54661_stu-miR157a:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcac 39
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 128 tttgtgctctctaagcttctgtcat 152
||||||||||||| |||||||||||
Sbjct: 67 tttgtgctctctatgcttctgtcat 91
>54570_smo-miR156b:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgacagaagatagagagcaca 40
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>54534_sly-miR156c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcac 39
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagcac 39
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>51551_pta-miR156a:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgacagaagatagagagcaca 40
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>48537_gma-miR157c:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 19 ttgacagaagatagagagcac 39
|||||||||||||||||||||
Sbjct: 84 ttgacagaagatagagagcac 64
>48529_gma-miR156b:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcacaa 41
||||||||||||| |||||||||||
Sbjct: 18 tgttgacagaagagagagagcacaa 42
>46917_ath-miR156h:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcacaa 41
||||||||||||| |||||||||||
Sbjct: 9 tgttgacagaagaaagagagcacaa 33
>46903_aqc-miR529:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcacaa 41
||||||||||||| |||||||||||
Sbjct: 15 tgttgacagaagagagagagcacaa 39
>46861_aqc-miR156a:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgacagaagatagagagcaca 40
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 127 ctttgtgctctctaagcttctgtca 151
|||||||||||||| ||||||||||
Sbjct: 55 ctttgtgctctctatgcttctgtca 79
>46857_ahy-miR157k:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tgttgacagaagatagagagcacaa 41
||||||||||||| |||||||||||
Sbjct: 19 tgttgacagaagagagagagcacaa 43
>54537_sly-miR157c:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 103 ttgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>51323_pco-miR157:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48677_lja-miR157c:pmrd
Length = 460
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ttgacagaagatagagagca 38
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20